RNA–Protein interactions for RNA: ENST00000477428.5

NRF1-207, Transcript of nuclear respiratory factor 1, humanhuman

TSL 3

Gene NRF1, Length 513 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1-207ENST00000477428 NISCHQ9Y2I1 1504 aa36.66■■■■□ 3.46
NRF1-207ENST00000477428 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
NRF1-207ENST00000477428 ABCC9O60706 1549 aa32.81■■■□□ 2.84
NRF1-207ENST00000477428 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
NRF1-207ENST00000477428 NACADO15069 1562 aa31.13■■■□□ 2.57
NRF1-207ENST00000477428 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
NRF1-207ENST00000477428 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
NRF1-207ENST00000477428 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
NRF1-207ENST00000477428 PABPN1Q86U42 306 aaKnown RBP eCLIP30.52■■■□□ 2.48
NRF1-207ENST00000477428 UNC13AQ9UPW8 1703 aa30.51■■■□□ 2.47
NRF1-207ENST00000477428 ZCCHC6Q5VYS8 1495 aaKnown RBP30.39■■■□□ 2.46
NRF1-207ENST00000477428 DCAF1Q9Y4B6 1507 aa30.35■■■□□ 2.45
NRF1-207ENST00000477428 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.44
NRF1-207ENST00000477428 SHROOM4Q9ULL8 1493 aa30.09■■■□□ 2.41
NRF1-207ENST00000477428 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
NRF1-207ENST00000477428 CC2D2AQ9P2K1 1620 aa29.66■■■□□ 2.34
NRF1-207ENST00000477428 EIF4G1Q04637 1599 aaKnown RBP29.62■■■□□ 2.33
NRF1-207ENST00000477428 CECR2Q9BXF3 1484 aa29.59■■■□□ 2.33
NRF1-207ENST00000477428 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
NRF1-207ENST00000477428 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
NRF1-207ENST00000477428 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
NRF1-207ENST00000477428 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
NRF1-207ENST00000477428 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
NRF1-207ENST00000477428 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
NRF1-207ENST00000477428 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
NRF1-207ENST00000477428 CUX2O14529 1486 aa28.36■■■□□ 2.13
NRF1-207ENST00000477428 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
NRF1-207ENST00000477428 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
NRF1-207ENST00000477428 DNAJC5Q9H3Z4 198 aa28.23■■■□□ 2.11
NRF1-207ENST00000477428 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.1
NRF1-207ENST00000477428 NESP48681 1621 aa28.15■■■□□ 2.1
NRF1-207ENST00000477428 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
NRF1-207ENST00000477428 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
NRF1-207ENST00000477428 THOC2Q8NI27 1593 aaKnown RBP27.91■■■□□ 2.06
NRF1-207ENST00000477428 WIZO95785 1651 aa27.85■■■□□ 2.05
NRF1-207ENST00000477428 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
NRF1-207ENST00000477428 KIF21AQ7Z4S6 1674 aa27.82■■■□□ 2.04
NRF1-207ENST00000477428 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
NRF1-207ENST00000477428 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
NRF1-207ENST00000477428 WDR62O43379 1518 aa27.58■■■□□ 2.01
NRF1-207ENST00000477428 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
NRF1-207ENST00000477428 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
NRF1-207ENST00000477428 CFTRP13569 1480 aa27.53■■■□□ 2
NRF1-207ENST00000477428 FANCD2Q9BXW9 1451 aa27.51■■■□□ 2
NRF1-207ENST00000477428 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
NRF1-207ENST00000477428 URB2Q14146 1524 aaKnown RBP27.24■■□□□ 1.95
NRF1-207ENST00000477428 CCDC88BA6NC98 1476 aa27.22■■□□□ 1.95
NRF1-207ENST00000477428 OSCARQ8IYS5 282 aa27.05■■□□□ 1.92
NRF1-207ENST00000477428 ABCC8Q09428 1581 aa27.03■■□□□ 1.92
NRF1-207ENST00000477428 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
NRF1-207ENST00000477428 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
NRF1-207ENST00000477428 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
NRF1-207ENST00000477428 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
NRF1-207ENST00000477428 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
NRF1-207ENST00000477428 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
NRF1-207ENST00000477428 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
NRF1-207ENST00000477428 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
NRF1-207ENST00000477428 AQRO60306 1485 aaKnown RBP eCLIP26.66■■□□□ 1.86
NRF1-207ENST00000477428 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
NRF1-207ENST00000477428 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
NRF1-207ENST00000477428 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
NRF1-207ENST00000477428 SOGA1O94964 1423 aa26.61■■□□□ 1.85
NRF1-207ENST00000477428 ARHGEF11O15085 1522 aa26.58■■□□□ 1.85
NRF1-207ENST00000477428 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
NRF1-207ENST00000477428 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
NRF1-207ENST00000477428 CHD1O14646 1710 aa26.55■■□□□ 1.84
NRF1-207ENST00000477428 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
NRF1-207ENST00000477428 FBLN2P98095 1184 aa26.51■■□□□ 1.83
NRF1-207ENST00000477428 CUX1P39880 1505 aa26.5■■□□□ 1.83
NRF1-207ENST00000477428 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
NRF1-207ENST00000477428 SUPT5HO00267 1087 aaKnown RBP26.43■■□□□ 1.82
NRF1-207ENST00000477428 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
NRF1-207ENST00000477428 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
NRF1-207ENST00000477428 GRIN2BQ13224 1484 aa26.4■■□□□ 1.82
NRF1-207ENST00000477428 CYB5RLQ6IPT4 315 aa26.36■■□□□ 1.81
NRF1-207ENST00000477428 CHMP7Q8WUX9 453 aaPredicted RBP26.36■■□□□ 1.81
NRF1-207ENST00000477428 SYNJ1O43426 1573 aa26.32■■□□□ 1.8
NRF1-207ENST00000477428 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
NRF1-207ENST00000477428 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
NRF1-207ENST00000477428 ARAP1Q96P48 1450 aa26.29■■□□□ 1.8
NRF1-207ENST00000477428 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
NRF1-207ENST00000477428 CLASP1Q7Z460 1538 aa26.28■■□□□ 1.8
NRF1-207ENST00000477428 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
NRF1-207ENST00000477428 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
NRF1-207ENST00000477428 WRNQ14191 1432 aaPredicted RBP eCLIP26.21■■□□□ 1.79
NRF1-207ENST00000477428 TOP2BQ02880 1626 aa26.14■■□□□ 1.77
NRF1-207ENST00000477428 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
NRF1-207ENST00000477428 TRHP20396 242 aaPredicted RBP26.09■■□□□ 1.77
NRF1-207ENST00000477428 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
NRF1-207ENST00000477428 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
NRF1-207ENST00000477428 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
NRF1-207ENST00000477428 FHAD1B1AJZ9 1412 aa25.97■■□□□ 1.75
NRF1-207ENST00000477428 NUP160Q12769 1436 aa25.95■■□□□ 1.74
NRF1-207ENST00000477428 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
NRF1-207ENST00000477428 SHROOM2Q13796 1616 aa25.82■■□□□ 1.72
NRF1-207ENST00000477428 ERCC6L2Q5T890 1561 aa25.78■■□□□ 1.72
NRF1-207ENST00000477428 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
NRF1-207ENST00000477428 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
NRF1-207ENST00000477428 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
NRF1-207ENST00000477428 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms