Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL4AA6NLU0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RFPL4AA6NLU0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL4AA6NLU0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.72■■□□□ 1.07
RFPL4AA6NLU0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFPL4AA6NLU0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFPL4AA6NLU0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RFPL4AA6NLU0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFPL4AA6NLU0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.71■■□□□ 1.07
RFPL4AA6NLU0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.71■■□□□ 1.07
RFPL4AA6NLU0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL4AA6NLU0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL4AA6NLU0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL4AA6NLU0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.7■■□□□ 1.06
RFPL4AA6NLU0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFPL4AA6NLU0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.7■■□□□ 1.06
RFPL4AA6NLU0 RPS2P35-201ENST00000443417 897 ntBASIC21.7■■□□□ 1.06
RFPL4AA6NLU0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFPL4AA6NLU0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFPL4AA6NLU0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.69■■□□□ 1.06
RFPL4AA6NLU0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFPL4AA6NLU0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RFPL4AA6NLU0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RFPL4AA6NLU0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL4AA6NLU0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL4AA6NLU0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.68■■□□□ 1.06
RFPL4AA6NLU0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RFPL4AA6NLU0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RFPL4AA6NLU0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL4AA6NLU0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.67■■□□□ 1.06
RFPL4AA6NLU0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL4AA6NLU0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.67■■□□□ 1.06
RFPL4AA6NLU0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL4AA6NLU0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL4AA6NLU0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL4AA6NLU0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL4AA6NLU0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.66■■□□□ 1.06
RFPL4AA6NLU0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RFPL4AA6NLU0 AP004833.2-201ENST00000532228 1454 ntBASIC21.65■■□□□ 1.06
RFPL4AA6NLU0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL4AA6NLU0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.64■■□□□ 1.05
RFPL4AA6NLU0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL4AA6NLU0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL4AA6NLU0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.64■■□□□ 1.05
RFPL4AA6NLU0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL4AA6NLU0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RFPL4AA6NLU0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RFPL4AA6NLU0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFPL4AA6NLU0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFPL4AA6NLU0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFPL4AA6NLU0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFPL4AA6NLU0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.62■■□□□ 1.05
RFPL4AA6NLU0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.61■■□□□ 1.05
RFPL4AA6NLU0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL4AA6NLU0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL4AA6NLU0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.61■■□□□ 1.05
RFPL4AA6NLU0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.61■■□□□ 1.05
RFPL4AA6NLU0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.61■■□□□ 1.05
RFPL4AA6NLU0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.61■■□□□ 1.05
RFPL4AA6NLU0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RFPL4AA6NLU0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL4AA6NLU0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL4AA6NLU0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RFPL4AA6NLU0 AL449106.1-201ENST00000608517 1980 ntBASIC21.59■■□□□ 1.05
RFPL4AA6NLU0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFPL4AA6NLU0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFPL4AA6NLU0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFPL4AA6NLU0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFPL4AA6NLU0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFPL4AA6NLU0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFPL4AA6NLU0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.58■■□□□ 1.05
RFPL4AA6NLU0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RFPL4AA6NLU0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFPL4AA6NLU0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.58■■□□□ 1.04
RFPL4AA6NLU0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.57■■□□□ 1.04
RFPL4AA6NLU0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL4AA6NLU0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL4AA6NLU0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.57■■□□□ 1.04
RFPL4AA6NLU0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL4AA6NLU0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL4AA6NLU0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL4AA6NLU0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL4AA6NLU0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL4AA6NLU0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL4AA6NLU0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL4AA6NLU0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL4AA6NLU0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL4AA6NLU0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RFPL4AA6NLU0 LINC00273-201ENST00000539813 1452 ntBASIC21.55■■□□□ 1.04
RFPL4AA6NLU0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL4AA6NLU0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 AC135983.2-203ENST00000454486 1613 ntBASIC21.54■■□□□ 1.04
RFPL4AA6NLU0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms