Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGB1A6NKQ9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CGB1A6NKQ9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.25■□□□□ 0.83
CGB1A6NKQ9 AC087741.3-201ENST00000624270 1347 ntBASIC20.25■□□□□ 0.83
CGB1A6NKQ9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.24■□□□□ 0.83
CGB1A6NKQ9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGB1A6NKQ9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CGB1A6NKQ9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CGB1A6NKQ9 AL162393.1-201ENST00000437852 946 ntBASIC20.24■□□□□ 0.83
CGB1A6NKQ9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGB1A6NKQ9 LINC00273-201ENST00000539813 1452 ntBASIC20.24■□□□□ 0.83
CGB1A6NKQ9 AP002414.2-202ENST00000590929 1450 ntBASIC20.24■□□□□ 0.83
CGB1A6NKQ9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.23■□□□□ 0.83
CGB1A6NKQ9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGB1A6NKQ9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CGB1A6NKQ9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGB1A6NKQ9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGB1A6NKQ9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CGB1A6NKQ9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CGB1A6NKQ9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGB1A6NKQ9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CGB1A6NKQ9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CGB1A6NKQ9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CGB1A6NKQ9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CGB1A6NKQ9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.19■□□□□ 0.82
CGB1A6NKQ9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CGB1A6NKQ9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.19■□□□□ 0.82
CGB1A6NKQ9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CGB1A6NKQ9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CGB1A6NKQ9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CGB1A6NKQ9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CGB1A6NKQ9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CGB1A6NKQ9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CGB1A6NKQ9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.17■□□□□ 0.82
CGB1A6NKQ9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CGB1A6NKQ9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CGB1A6NKQ9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.17■□□□□ 0.82
CGB1A6NKQ9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CGB1A6NKQ9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CGB1A6NKQ9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.16■□□□□ 0.82
CGB1A6NKQ9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CGB1A6NKQ9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.16■□□□□ 0.82
CGB1A6NKQ9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CGB1A6NKQ9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CGB1A6NKQ9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CGB1A6NKQ9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CGB1A6NKQ9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.15■□□□□ 0.82
CGB1A6NKQ9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CGB1A6NKQ9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CGB1A6NKQ9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CGB1A6NKQ9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CGB1A6NKQ9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CGB1A6NKQ9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CGB1A6NKQ9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CGB1A6NKQ9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CGB1A6NKQ9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CGB1A6NKQ9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CGB1A6NKQ9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.13■□□□□ 0.81
CGB1A6NKQ9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.13■□□□□ 0.81
CGB1A6NKQ9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CGB1A6NKQ9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CGB1A6NKQ9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.12■□□□□ 0.81
CGB1A6NKQ9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CGB1A6NKQ9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CGB1A6NKQ9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CGB1A6NKQ9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.1■□□□□ 0.81
CGB1A6NKQ9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CGB1A6NKQ9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGB1A6NKQ9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.1■□□□□ 0.81
CGB1A6NKQ9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CGB1A6NKQ9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.1■□□□□ 0.81
CGB1A6NKQ9 AC044849.2-201ENST00000606596 710 ntBASIC20.1■□□□□ 0.81
CGB1A6NKQ9 AC018358.1-201ENST00000631079 1402 ntBASIC20.1■□□□□ 0.81
CGB1A6NKQ9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CGB1A6NKQ9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.09■□□□□ 0.81
CGB1A6NKQ9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGB1A6NKQ9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGB1A6NKQ9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CGB1A6NKQ9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CGB1A6NKQ9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CGB1A6NKQ9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGB1A6NKQ9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CGB1A6NKQ9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGB1A6NKQ9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CGB1A6NKQ9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CGB1A6NKQ9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGB1A6NKQ9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGB1A6NKQ9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.07■□□□□ 0.8
CGB1A6NKQ9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGB1A6NKQ9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CGB1A6NKQ9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms