Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBB4AP04350 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBB4AP04350 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBB4AP04350 SIRPAP1-201ENST00000448467 1770 ntBASIC20.66■□□□□ 0.9
TUBB4AP04350 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.66■□□□□ 0.9
TUBB4AP04350 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBB4AP04350 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TUBB4AP04350 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.66■□□□□ 0.9
TUBB4AP04350 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBB4AP04350 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBB4AP04350 AC138932.1-201ENST00000534164 6830 ntBASIC20.66■□□□□ 0.9
TUBB4AP04350 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.65■□□□□ 0.9
TUBB4AP04350 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.65■□□□□ 0.9
TUBB4AP04350 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TUBB4AP04350 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TUBB4AP04350 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TUBB4AP04350 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 AC142381.2-201ENST00000566120 298 ntBASIC20.65■□□□□ 0.9
TUBB4AP04350 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
TUBB4AP04350 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TUBB4AP04350 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TUBB4AP04350 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.65■□□□□ 0.9
TUBB4AP04350 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB4AP04350 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB4AP04350 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB4AP04350 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.64■□□□□ 0.9
TUBB4AP04350 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB4AP04350 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB4AP04350 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.64■□□□□ 0.9
TUBB4AP04350 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB4AP04350 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
TUBB4AP04350 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB4AP04350 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB4AP04350 AC023632.3-201ENST00000521633 145 ntBASIC20.64■□□□□ 0.89
TUBB4AP04350 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
TUBB4AP04350 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB4AP04350 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB4AP04350 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB4AP04350 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.64■□□□□ 0.89
TUBB4AP04350 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB4AP04350 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.64■□□□□ 0.89
TUBB4AP04350 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB4AP04350 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 ESPNP-201ENST00000270691 2015 ntBASIC20.63■□□□□ 0.89
TUBB4AP04350 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.63■□□□□ 0.89
TUBB4AP04350 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBB4AP04350 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.63■□□□□ 0.89
TUBB4AP04350 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TUBB4AP04350 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBB4AP04350 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBB4AP04350 AC083906.6-201ENST00000641366 219 ntBASIC20.63■□□□□ 0.89
TUBB4AP04350 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.63■□□□□ 0.89
TUBB4AP04350 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TUBB4AP04350 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBB4AP04350 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TUBB4AP04350 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB4AP04350 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB4AP04350 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB4AP04350 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBB4AP04350 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TUBB4AP04350 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBB4AP04350 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB4AP04350 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TUBB4AP04350 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TUBB4AP04350 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB4AP04350 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB4AP04350 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBB4AP04350 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TUBB4AP04350 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBB4AP04350 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBB4AP04350 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB4AP04350 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB4AP04350 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.62■□□□□ 0.89
TUBB4AP04350 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB4AP04350 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBB4AP04350 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms