RNA–Protein interactions for RNA: ENST00000344870.4

LARP6-202, Transcript of La ribonucleoprotein domain family member 6, humanhuman

TSL 1 (best) BASIC

Gene LARP6, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP6-202ENST00000344870 NISCHQ9Y2I1 1504 aa51.64■■■■■ 5.86
LARP6-202ENST00000344870 CCDC180Q9P1Z9 1646 aa45.9■■■■■ 4.94
LARP6-202ENST00000344870 ABCC9O60706 1549 aa44.94■■■■■ 4.78
LARP6-202ENST00000344870 RB1CC1Q8TDY2 1594 aa43.2■■■■■ 4.51
LARP6-202ENST00000344870 NACADO15069 1562 aa43.15■■■■■ 4.5
LARP6-202ENST00000344870 DCAF8L2P0C7V8 631 aa43.13■■■■■ 4.49
LARP6-202ENST00000344870 ZCCHC6Q5VYS8 1495 aaKnown RBP43.01■■■■■ 4.48
LARP6-202ENST00000344870 MYO15BQ96JP2 1530 aa42.88■■■■■ 4.46
LARP6-202ENST00000344870 DCAF1Q9Y4B6 1507 aa42.7■■■■■ 4.43
LARP6-202ENST00000344870 UNC13AQ9UPW8 1703 aa42.28■■■■■ 4.36
LARP6-202ENST00000344870 PABPN1Q86U42 306 aaKnown RBP eCLIP42■■■■■ 4.31
LARP6-202ENST00000344870 BICRAQ9NZM4 1560 aa41.93■■■■■ 4.3
LARP6-202ENST00000344870 SCRIBQ14160 1630 aa41.91■■■■■ 4.3
LARP6-202ENST00000344870 SHROOM4Q9ULL8 1493 aa41.43■■■■■ 4.22
LARP6-202ENST00000344870 DNAJC5BQ9UF47 199 aa41.27■■■■■ 4.2
LARP6-202ENST00000344870 EIF4G1Q04637 1599 aaKnown RBP40.81■■■■■ 4.12
LARP6-202ENST00000344870 CC2D2AQ9P2K1 1620 aa40.65■■■■■ 4.1
LARP6-202ENST00000344870 CECR2Q9BXF3 1484 aa40.37■■■■■ 4.05
LARP6-202ENST00000344870 SMARCA4P51532 1647 aa40.08■■■■■ 4.01
LARP6-202ENST00000344870 BAZ1AQ9NRL2 1556 aaPredicted RBP40.01■■■■□ 3.99
LARP6-202ENST00000344870 ATAD2BQ9ULI0 1458 aa39.85■■■■□ 3.97
LARP6-202ENST00000344870 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
LARP6-202ENST00000344870 MROH2BQ7Z745 1585 aa39.81■■■■□ 3.96
LARP6-202ENST00000344870 SMARCA2P51531 1590 aa39.79■■■■□ 3.96
LARP6-202ENST00000344870 PEG3Q9GZU2 1588 aa39.67■■■■□ 3.94
LARP6-202ENST00000344870 HMGXB3Q12766 1538 aa39.62■■■■□ 3.93
LARP6-202ENST00000344870 BAZ1BQ9UIG0 1483 aaKnown RBP39.52■■■■□ 3.92
LARP6-202ENST00000344870 WIZO95785 1651 aa39.39■■■■□ 3.9
LARP6-202ENST00000344870 RSF1Q96T23 1441 aaPredicted RBP39.34■■■■□ 3.89
LARP6-202ENST00000344870 TOP2AP11388 1531 aaKnown RBP38.95■■■■□ 3.83
LARP6-202ENST00000344870 NESP48681 1621 aa38.9■■■■□ 3.82
LARP6-202ENST00000344870 LAMC3Q9Y6N6 1575 aa38.77■■■■□ 3.8
LARP6-202ENST00000344870 ERCC6Q03468 1493 aa38.72■■■■□ 3.79
LARP6-202ENST00000344870 CADPSQ9ULU8 1353 aa38.66■■■■□ 3.78
LARP6-202ENST00000344870 CCDC88BA6NC98 1476 aa38.5■■■■□ 3.75
LARP6-202ENST00000344870 PDS5BQ9NTI5 1447 aa38.49■■■■□ 3.75
LARP6-202ENST00000344870 KIF21AQ7Z4S6 1674 aa38.44■■■■□ 3.74
LARP6-202ENST00000344870 CFTRP13569 1480 aa38.43■■■■□ 3.74
LARP6-202ENST00000344870 SUPT5HO00267 1087 aaKnown RBP38.34■■■■□ 3.73
LARP6-202ENST00000344870 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
LARP6-202ENST00000344870 CUX2O14529 1486 aa38.29■■■■□ 3.72
LARP6-202ENST00000344870 FANCD2Q9BXW9 1451 aa38.22■■■■□ 3.71
LARP6-202ENST00000344870 CEP164Q9UPV0 1460 aa38.17■■■■□ 3.7
LARP6-202ENST00000344870 PRDM2Q13029 1718 aa38.16■■■■□ 3.7
LARP6-202ENST00000344870 MRC2Q9UBG0 1479 aa38.12■■■■□ 3.69
LARP6-202ENST00000344870 WDR62O43379 1518 aa38.01■■■■□ 3.67
LARP6-202ENST00000344870 URB2Q14146 1524 aaKnown RBP37.86■■■■□ 3.65
LARP6-202ENST00000344870 TOPBP1Q92547 1522 aa37.62■■■■□ 3.61
LARP6-202ENST00000344870 ABCC8Q09428 1581 aa37.58■■■■□ 3.61
LARP6-202ENST00000344870 DNMBPQ6XZF7 1577 aa37.57■■■■□ 3.6
LARP6-202ENST00000344870 IFT140Q96RY7 1462 aa37.37■■■■□ 3.57
LARP6-202ENST00000344870 CUX1P39880 1505 aa37.35■■■■□ 3.57
LARP6-202ENST00000344870 POLA1P09884 1462 aaPredicted RBP37.3■■■■□ 3.56
LARP6-202ENST00000344870 ZNF608Q9ULD9 1512 aaPredicted RBP37.23■■■■□ 3.55
LARP6-202ENST00000344870 TARBP1Q13395 1621 aaKnown RBP37.21■■■■□ 3.55
LARP6-202ENST00000344870 FGD5Q6ZNL6 1462 aa37.21■■■■□ 3.55
LARP6-202ENST00000344870 RAD54L2Q9Y4B4 1467 aa37.15■■■■□ 3.54
LARP6-202ENST00000344870 SOGA1O94964 1423 aa37.13■■■■□ 3.53
LARP6-202ENST00000344870 DNAJC5Q9H3Z4 198 aa37.13■■■■□ 3.53
LARP6-202ENST00000344870 WRNQ14191 1432 aaPredicted RBP eCLIP37.09■■■■□ 3.53
LARP6-202ENST00000344870 EIF4G3O43432 1585 aaKnown RBP37.08■■■■□ 3.53
LARP6-202ENST00000344870 SYNJ1O43426 1573 aa37.03■■■■□ 3.52
LARP6-202ENST00000344870 AQRO60306 1485 aaKnown RBP eCLIP37.01■■■■□ 3.52
LARP6-202ENST00000344870 TOP2BQ02880 1626 aa37.01■■■■□ 3.52
LARP6-202ENST00000344870 BIVM-ERCC5R4GMW8 1640 aa37.01■■■■□ 3.52
LARP6-202ENST00000344870 TDRD9Q8NDG6 1382 aaKnown RBP36.94■■■■□ 3.5
LARP6-202ENST00000344870 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
LARP6-202ENST00000344870 ABCA10Q8WWZ4 1543 aa36.85■■■■□ 3.49
LARP6-202ENST00000344870 ABCA5Q8WWZ7 1642 aa36.71■■■■□ 3.47
LARP6-202ENST00000344870 GAPVD1Q14C86 1478 aa36.71■■■■□ 3.47
LARP6-202ENST00000344870 OSCARQ8IYS5 282 aa36.71■■■■□ 3.47
LARP6-202ENST00000344870 GRIN2BQ13224 1484 aa36.69■■■■□ 3.46
LARP6-202ENST00000344870 SNAPC4Q5SXM2 1469 aa36.67■■■■□ 3.46
LARP6-202ENST00000344870 PBRM1Q86U86 1689 aa36.66■■■■□ 3.46
LARP6-202ENST00000344870 CHD1O14646 1710 aa36.62■■■■□ 3.45
LARP6-202ENST00000344870 MAGI1Q96QZ7 1491 aaPredicted RBP36.61■■■■□ 3.45
LARP6-202ENST00000344870 FBLN2P98095 1184 aa36.55■■■■□ 3.44
LARP6-202ENST00000344870 SYNJ2O15056 1496 aa36.47■■■■□ 3.43
LARP6-202ENST00000344870 CHMP7Q8WUX9 453 aaPredicted RBP36.44■■■■□ 3.42
LARP6-202ENST00000344870 ERICH3Q5RHP9 1530 aa36.39■■■■□ 3.42
LARP6-202ENST00000344870 ADAMTS12P58397 1594 aa36.36■■■■□ 3.41
LARP6-202ENST00000344870 KIF27Q86VH2 1401 aa36.3■■■■□ 3.4
LARP6-202ENST00000344870 FHAD1B1AJZ9 1412 aa36.28■■■■□ 3.4
LARP6-202ENST00000344870 GRIN2AQ12879 1464 aa36.24■■■■□ 3.39
LARP6-202ENST00000344870 CLASP1Q7Z460 1538 aa36.22■■■■□ 3.39
LARP6-202ENST00000344870 TRIM41Q8WV44 630 aa36.19■■■■□ 3.38
LARP6-202ENST00000344870 IGF1RP08069 1367 aa36.17■■■■□ 3.38
LARP6-202ENST00000344870 RIMBP3CA6NJZ7 1639 aa36.16■■■■□ 3.38
LARP6-202ENST00000344870 RIMBP3BA6NNM3 1639 aa36.16■■■■□ 3.38
LARP6-202ENST00000344870 RIMBP3Q9UFD9 1639 aa36.16■■■■□ 3.38
LARP6-202ENST00000344870 ARHGEF11O15085 1522 aa36.13■■■■□ 3.38
LARP6-202ENST00000344870 CEP170Q5SW79 1584 aa36.08■■■■□ 3.37
LARP6-202ENST00000344870 NUP160Q12769 1436 aa36.08■■■■□ 3.37
LARP6-202ENST00000344870 CUL7Q14999 1698 aa36.07■■■■□ 3.37
LARP6-202ENST00000344870 RUSC2Q8N2Y8 1516 aa36.02■■■■□ 3.36
LARP6-202ENST00000344870 CARMIL1Q5VZK9 1371 aa35.94■■■■□ 3.34
LARP6-202ENST00000344870 ARAP1Q96P48 1450 aa35.86■■■■□ 3.33
LARP6-202ENST00000344870 SHROOM2Q13796 1616 aa35.82■■■■□ 3.32
LARP6-202ENST00000344870 CYB5RLQ6IPT4 315 aa35.8■■■■□ 3.32
LARP6-202ENST00000344870 CHIC1Q5VXU3 224 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms