RNA–Protein interactions for RNA: ENST00000367309.1

PHLDA3-201, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHLDA3, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-201ENST00000367309 NISCHQ9Y2I1 1504 aa52.61■■■■■ 6.01
PHLDA3-201ENST00000367309 CCDC180Q9P1Z9 1646 aa46.83■■■■■ 5.09
PHLDA3-201ENST00000367309 ABCC9O60706 1549 aa45.97■■■■■ 4.95
PHLDA3-201ENST00000367309 RB1CC1Q8TDY2 1594 aa44.17■■■■■ 4.66
PHLDA3-201ENST00000367309 NACADO15069 1562 aa44.1■■■■■ 4.65
PHLDA3-201ENST00000367309 DCAF8L2P0C7V8 631 aa43.93■■■■■ 4.62
PHLDA3-201ENST00000367309 MYO15BQ96JP2 1530 aa43.84■■■■■ 4.61
PHLDA3-201ENST00000367309 ZCCHC6Q5VYS8 1495 aaKnown RBP43.79■■■■■ 4.6
PHLDA3-201ENST00000367309 DCAF1Q9Y4B6 1507 aa43.57■■■■■ 4.56
PHLDA3-201ENST00000367309 DNAJC5BQ9UF47 199 aa43.45■■■■■ 4.55
PHLDA3-201ENST00000367309 UNC13AQ9UPW8 1703 aa43.12■■■■■ 4.49
PHLDA3-201ENST00000367309 PABPN1Q86U42 306 aaKnown RBP eCLIP42.93■■■■■ 4.46
PHLDA3-201ENST00000367309 BICRAQ9NZM4 1560 aa42.86■■■■■ 4.45
PHLDA3-201ENST00000367309 SCRIBQ14160 1630 aa42.67■■■■■ 4.42
PHLDA3-201ENST00000367309 SHROOM4Q9ULL8 1493 aa42.44■■■■■ 4.38
PHLDA3-201ENST00000367309 EIF4G1Q04637 1599 aaKnown RBP41.73■■■■■ 4.27
PHLDA3-201ENST00000367309 CC2D2AQ9P2K1 1620 aa41.58■■■■■ 4.25
PHLDA3-201ENST00000367309 CECR2Q9BXF3 1484 aa41.43■■■■■ 4.22
PHLDA3-201ENST00000367309 SMARCA4P51532 1647 aa40.84■■■■■ 4.13
PHLDA3-201ENST00000367309 BAZ1AQ9NRL2 1556 aaPredicted RBP40.78■■■■■ 4.12
PHLDA3-201ENST00000367309 NCAPD3P42695 1498 aa40.72■■■■■ 4.11
PHLDA3-201ENST00000367309 ATAD2BQ9ULI0 1458 aa40.7■■■■■ 4.11
PHLDA3-201ENST00000367309 SMARCA2P51531 1590 aa40.62■■■■■ 4.09
PHLDA3-201ENST00000367309 MROH2BQ7Z745 1585 aa40.52■■■■■ 4.08
PHLDA3-201ENST00000367309 PEG3Q9GZU2 1588 aa40.49■■■■■ 4.07
PHLDA3-201ENST00000367309 HMGXB3Q12766 1538 aa40.48■■■■■ 4.07
PHLDA3-201ENST00000367309 DNAJC5Q9H3Z4 198 aa40.33■■■■■ 4.05
PHLDA3-201ENST00000367309 BAZ1BQ9UIG0 1483 aaKnown RBP40.32■■■■■ 4.04
PHLDA3-201ENST00000367309 WIZO95785 1651 aa40.04■■■■■ 4
PHLDA3-201ENST00000367309 RSF1Q96T23 1441 aaPredicted RBP40.02■■■■■ 4
PHLDA3-201ENST00000367309 CUX2O14529 1486 aa39.84■■■■□ 3.97
PHLDA3-201ENST00000367309 NESP48681 1621 aa39.73■■■■□ 3.95
PHLDA3-201ENST00000367309 ERCC6Q03468 1493 aa39.68■■■■□ 3.94
PHLDA3-201ENST00000367309 TOP2AP11388 1531 aaKnown RBP39.65■■■■□ 3.94
PHLDA3-201ENST00000367309 LAMC3Q9Y6N6 1575 aa39.63■■■■□ 3.94
PHLDA3-201ENST00000367309 CADPSQ9ULU8 1353 aa39.51■■■■□ 3.92
PHLDA3-201ENST00000367309 PDS5BQ9NTI5 1447 aa39.4■■■■□ 3.9
PHLDA3-201ENST00000367309 CFTRP13569 1480 aa39.24■■■■□ 3.87
PHLDA3-201ENST00000367309 KIF21AQ7Z4S6 1674 aa39.22■■■■□ 3.87
PHLDA3-201ENST00000367309 CCDC88BA6NC98 1476 aa39.18■■■■□ 3.86
PHLDA3-201ENST00000367309 THOC2Q8NI27 1593 aaKnown RBP39.18■■■■□ 3.86
PHLDA3-201ENST00000367309 FANCD2Q9BXW9 1451 aa39.03■■■■□ 3.84
PHLDA3-201ENST00000367309 CEP164Q9UPV0 1460 aa38.98■■■■□ 3.83
PHLDA3-201ENST00000367309 MRC2Q9UBG0 1479 aa38.98■■■■□ 3.83
PHLDA3-201ENST00000367309 WDR62O43379 1518 aa38.87■■■■□ 3.81
PHLDA3-201ENST00000367309 PRDM2Q13029 1718 aa38.85■■■■□ 3.81
PHLDA3-201ENST00000367309 SUPT5HO00267 1087 aaKnown RBP38.78■■■■□ 3.8
PHLDA3-201ENST00000367309 URB2Q14146 1524 aaKnown RBP38.66■■■■□ 3.78
PHLDA3-201ENST00000367309 ABCC8Q09428 1581 aa38.4■■■■□ 3.74
PHLDA3-201ENST00000367309 TOPBP1Q92547 1522 aa38.38■■■■□ 3.74
PHLDA3-201ENST00000367309 DNMBPQ6XZF7 1577 aa38.32■■■■□ 3.73
PHLDA3-201ENST00000367309 TRIM41Q8WV44 630 aa38.24■■■■□ 3.71
PHLDA3-201ENST00000367309 IFT140Q96RY7 1462 aa38.21■■■■□ 3.71
PHLDA3-201ENST00000367309 POLA1P09884 1462 aaPredicted RBP38.05■■■■□ 3.68
PHLDA3-201ENST00000367309 CUX1P39880 1505 aa38.02■■■■□ 3.68
PHLDA3-201ENST00000367309 ZNF608Q9ULD9 1512 aaPredicted RBP38.02■■■■□ 3.68
PHLDA3-201ENST00000367309 TARBP1Q13395 1621 aaKnown RBP37.99■■■■□ 3.67
PHLDA3-201ENST00000367309 OSCARQ8IYS5 282 aa37.95■■■■□ 3.67
PHLDA3-201ENST00000367309 FGD5Q6ZNL6 1462 aa37.91■■■■□ 3.66
PHLDA3-201ENST00000367309 SOGA1O94964 1423 aa37.89■■■■□ 3.66
PHLDA3-201ENST00000367309 RAD54L2Q9Y4B4 1467 aa37.87■■■■□ 3.65
PHLDA3-201ENST00000367309 EIF4G3O43432 1585 aaKnown RBP37.85■■■■□ 3.65
PHLDA3-201ENST00000367309 AQRO60306 1485 aaKnown RBP eCLIP37.79■■■■□ 3.641e-6■■■■□ 26.1
PHLDA3-201ENST00000367309 WRNQ14191 1432 aaPredicted RBP eCLIP37.71■■■■□ 3.63
PHLDA3-201ENST00000367309 WDR97A6NE52 1622 aa37.7■■■■□ 3.63
PHLDA3-201ENST00000367309 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
PHLDA3-201ENST00000367309 TOP2BQ02880 1626 aa37.65■■■■□ 3.62
PHLDA3-201ENST00000367309 BIVM-ERCC5R4GMW8 1640 aa37.64■■■■□ 3.62
PHLDA3-201ENST00000367309 SYNJ1O43426 1573 aa37.61■■■■□ 3.61
PHLDA3-201ENST00000367309 ABCA10Q8WWZ4 1543 aa37.58■■■■□ 3.61
PHLDA3-201ENST00000367309 GRIN2BQ13224 1484 aa37.48■■■■□ 3.59
PHLDA3-201ENST00000367309 GAPVD1Q14C86 1478 aa37.45■■■■□ 3.59
PHLDA3-201ENST00000367309 SNAPC4Q5SXM2 1469 aa37.43■■■■□ 3.58
PHLDA3-201ENST00000367309 ABCA5Q8WWZ7 1642 aa37.42■■■■□ 3.58
PHLDA3-201ENST00000367309 MAGI1Q96QZ7 1491 aaPredicted RBP37.41■■■■□ 3.58
PHLDA3-201ENST00000367309 RIMBP3CA6NJZ7 1639 aa37.39■■■■□ 3.58
PHLDA3-201ENST00000367309 RIMBP3BA6NNM3 1639 aa37.39■■■■□ 3.58
PHLDA3-201ENST00000367309 RIMBP3Q9UFD9 1639 aa37.39■■■■□ 3.58
PHLDA3-201ENST00000367309 CHD1O14646 1710 aa37.37■■■■□ 3.57
PHLDA3-201ENST00000367309 PBRM1Q86U86 1689 aa37.32■■■■□ 3.57
PHLDA3-201ENST00000367309 FBLN2P98095 1184 aa37.32■■■■□ 3.56
PHLDA3-201ENST00000367309 ARHGEF11O15085 1522 aa37.27■■■■□ 3.56
PHLDA3-201ENST00000367309 SYNJ2O15056 1496 aa37.26■■■■□ 3.55
PHLDA3-201ENST00000367309 CHMP7Q8WUX9 453 aaPredicted RBP37.23■■■■□ 3.55
PHLDA3-201ENST00000367309 ERICH3Q5RHP9 1530 aa37.11■■■■□ 3.53
PHLDA3-201ENST00000367309 ADAMTS12P58397 1594 aa37.07■■■■□ 3.52
PHLDA3-201ENST00000367309 CLASP1Q7Z460 1538 aa37.04■■■■□ 3.52
PHLDA3-201ENST00000367309 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
PHLDA3-201ENST00000367309 CYB5RLQ6IPT4 315 aa37.02■■■■□ 3.52
PHLDA3-201ENST00000367309 GRIN2AQ12879 1464 aa36.99■■■■□ 3.51
PHLDA3-201ENST00000367309 KIF27Q86VH2 1401 aa36.95■■■■□ 3.51
PHLDA3-201ENST00000367309 ARAP1Q96P48 1450 aa36.87■■■■□ 3.49
PHLDA3-201ENST00000367309 NUP160Q12769 1436 aa36.86■■■■□ 3.49
PHLDA3-201ENST00000367309 IGF1RP08069 1367 aa36.85■■■■□ 3.49
PHLDA3-201ENST00000367309 CEP170Q5SW79 1584 aa36.79■■■■□ 3.48
PHLDA3-201ENST00000367309 TRHP20396 242 aaPredicted RBP36.74■■■■□ 3.47
PHLDA3-201ENST00000367309 CUL7Q14999 1698 aa36.71■■■■□ 3.47
PHLDA3-201ENST00000367309 CARMIL1Q5VZK9 1371 aa36.6■■■■□ 3.45
PHLDA3-201ENST00000367309 SHROOM2Q13796 1616 aa36.59■■■■□ 3.45
PHLDA3-201ENST00000367309 RUSC2Q8N2Y8 1516 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms