RNA–Protein interactions for RNA: ENST00000448467.1

SIRPAP1-201, Transcript of signal regulatory protein alpha pseudogene 1, humanhuman

BASIC

Gene SIRPAP1, Length 1,770 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP1-201ENST00000448467 NISCHQ9Y2I1 1504 aa41.47■■■■■ 4.23
SIRPAP1-201ENST00000448467 CCDC180Q9P1Z9 1646 aa36.46■■■■□ 3.43
SIRPAP1-201ENST00000448467 ABCC9O60706 1549 aa35.33■■■■□ 3.25
SIRPAP1-201ENST00000448467 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
SIRPAP1-201ENST00000448467 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
SIRPAP1-201ENST00000448467 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
SIRPAP1-201ENST00000448467 NACADO15069 1562 aa34.16■■■■□ 3.06
SIRPAP1-201ENST00000448467 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
SIRPAP1-201ENST00000448467 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
SIRPAP1-201ENST00000448467 SCRIBQ14160 1630 aa33.57■■■□□ 2.97
SIRPAP1-201ENST00000448467 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
SIRPAP1-201ENST00000448467 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
SIRPAP1-201ENST00000448467 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
SIRPAP1-201ENST00000448467 BICRAQ9NZM4 1560 aa33.08■■■□□ 2.89
SIRPAP1-201ENST00000448467 CECR2Q9BXF3 1484 aa32.36■■■□□ 2.77
SIRPAP1-201ENST00000448467 EIF4G1Q04637 1599 aaKnown RBP32.16■■■□□ 2.74
SIRPAP1-201ENST00000448467 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.72
SIRPAP1-201ENST00000448467 MROH2BQ7Z745 1585 aa32.06■■■□□ 2.72
SIRPAP1-201ENST00000448467 SMARCA4P51532 1647 aa32.06■■■□□ 2.72
SIRPAP1-201ENST00000448467 CC2D2AQ9P2K1 1620 aa31.91■■■□□ 2.7
SIRPAP1-201ENST00000448467 RSF1Q96T23 1441 aaPredicted RBP31.9■■■□□ 2.7
SIRPAP1-201ENST00000448467 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.69
SIRPAP1-201ENST00000448467 SUPT5HO00267 1087 aaKnown RBP31.83■■■□□ 2.69
SIRPAP1-201ENST00000448467 WIZO95785 1651 aa31.78■■■□□ 2.68
SIRPAP1-201ENST00000448467 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
SIRPAP1-201ENST00000448467 SMARCA2P51531 1590 aa31.64■■■□□ 2.66
SIRPAP1-201ENST00000448467 PEG3Q9GZU2 1588 aa31.62■■■□□ 2.65
SIRPAP1-201ENST00000448467 NCAPD3P42695 1498 aa31.53■■■□□ 2.64
SIRPAP1-201ENST00000448467 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
SIRPAP1-201ENST00000448467 HMGXB3Q12766 1538 aa31.41■■■□□ 2.62
SIRPAP1-201ENST00000448467 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
SIRPAP1-201ENST00000448467 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
SIRPAP1-201ENST00000448467 NESP48681 1621 aa30.78■■■□□ 2.52
SIRPAP1-201ENST00000448467 CADPSQ9ULU8 1353 aa30.71■■■□□ 2.51
SIRPAP1-201ENST00000448467 CFTRP13569 1480 aa30.64■■■□□ 2.49
SIRPAP1-201ENST00000448467 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
SIRPAP1-201ENST00000448467 PRDM2Q13029 1718 aa30.43■■■□□ 2.46
SIRPAP1-201ENST00000448467 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
SIRPAP1-201ENST00000448467 FANCD2Q9BXW9 1451 aa30.39■■■□□ 2.46
SIRPAP1-201ENST00000448467 KIF21AQ7Z4S6 1674 aa30.37■■■□□ 2.45
SIRPAP1-201ENST00000448467 ERCC6Q03468 1493 aa30.35■■■□□ 2.45
SIRPAP1-201ENST00000448467 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
SIRPAP1-201ENST00000448467 ABCC8Q09428 1581 aa30.23■■■□□ 2.43
SIRPAP1-201ENST00000448467 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
SIRPAP1-201ENST00000448467 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
SIRPAP1-201ENST00000448467 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
SIRPAP1-201ENST00000448467 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
SIRPAP1-201ENST00000448467 CUX1P39880 1505 aa30.02■■■□□ 2.4
SIRPAP1-201ENST00000448467 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
SIRPAP1-201ENST00000448467 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
SIRPAP1-201ENST00000448467 TOPBP1Q92547 1522 aa29.97■■■□□ 2.39
SIRPAP1-201ENST00000448467 DNMBPQ6XZF7 1577 aa29.95■■■□□ 2.39
SIRPAP1-201ENST00000448467 WDR62O43379 1518 aa29.92■■■□□ 2.38
SIRPAP1-201ENST00000448467 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
SIRPAP1-201ENST00000448467 TOP2BQ02880 1626 aa29.88■■■□□ 2.37
SIRPAP1-201ENST00000448467 BIVM-ERCC5R4GMW8 1640 aa29.84■■■□□ 2.37
SIRPAP1-201ENST00000448467 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
SIRPAP1-201ENST00000448467 POLA1P09884 1462 aaPredicted RBP29.77■■■□□ 2.36
SIRPAP1-201ENST00000448467 RAD54L2Q9Y4B4 1467 aa29.74■■■□□ 2.35
SIRPAP1-201ENST00000448467 CUX2O14529 1486 aa29.7■■■□□ 2.34
SIRPAP1-201ENST00000448467 SOGA1O94964 1423 aa29.69■■■□□ 2.34
SIRPAP1-201ENST00000448467 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
SIRPAP1-201ENST00000448467 IFT140Q96RY7 1462 aa29.57■■■□□ 2.32
SIRPAP1-201ENST00000448467 ZNF608Q9ULD9 1512 aaPredicted RBP29.52■■■□□ 2.32
SIRPAP1-201ENST00000448467 TDRD9Q8NDG6 1382 aaKnown RBP29.51■■■□□ 2.32
SIRPAP1-201ENST00000448467 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
SIRPAP1-201ENST00000448467 WDR97A6NE52 1622 aa29.46■■■□□ 2.31
SIRPAP1-201ENST00000448467 FAM9AQ8IZU1 332 aaPredicted RBP29.46■■■□□ 2.31
SIRPAP1-201ENST00000448467 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
SIRPAP1-201ENST00000448467 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.3
SIRPAP1-201ENST00000448467 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
SIRPAP1-201ENST00000448467 KIF27Q86VH2 1401 aa29.35■■■□□ 2.29
SIRPAP1-201ENST00000448467 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
SIRPAP1-201ENST00000448467 ABCA5Q8WWZ7 1642 aa29.32■■■□□ 2.28
SIRPAP1-201ENST00000448467 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
SIRPAP1-201ENST00000448467 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
SIRPAP1-201ENST00000448467 IGF1RP08069 1367 aa29.19■■■□□ 2.26
SIRPAP1-201ENST00000448467 EHMT2Q96KQ7 1210 aa29.17■■■□□ 2.26
SIRPAP1-201ENST00000448467 CSRNP3Q8WYN3 585 aa29.16■■■□□ 2.26
SIRPAP1-201ENST00000448467 SNAPC4Q5SXM2 1469 aa29.14■■■□□ 2.26
SIRPAP1-201ENST00000448467 EEA1Q15075 1411 aa29.13■■■□□ 2.25
SIRPAP1-201ENST00000448467 ERICH3Q5RHP9 1530 aa29.11■■■□□ 2.25
SIRPAP1-201ENST00000448467 FBLN2P98095 1184 aa29.07■■■□□ 2.24
SIRPAP1-201ENST00000448467 CARMIL1Q5VZK9 1371 aa29.03■■■□□ 2.24
SIRPAP1-201ENST00000448467 MAGI1Q96QZ7 1491 aaPredicted RBP29.01■■■□□ 2.23
SIRPAP1-201ENST00000448467 ADAMTS12P58397 1594 aa29■■■□□ 2.23
SIRPAP1-201ENST00000448467 HRCP23327 699 aa29■■■□□ 2.23
SIRPAP1-201ENST00000448467 CUL7Q14999 1698 aa28.98■■■□□ 2.23
SIRPAP1-201ENST00000448467 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
SIRPAP1-201ENST00000448467 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
SIRPAP1-201ENST00000448467 PRXQ9BXM0 1461 aa28.93■■■□□ 2.22
SIRPAP1-201ENST00000448467 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
SIRPAP1-201ENST00000448467 RAPGEF2Q9Y4G8 1499 aa28.9■■■□□ 2.22
SIRPAP1-201ENST00000448467 CHD1O14646 1710 aa28.9■■■□□ 2.22
SIRPAP1-201ENST00000448467 LOC105371045A0A1W2PR82 267 aa28.9■■■□□ 2.22
SIRPAP1-201ENST00000448467 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
SIRPAP1-201ENST00000448467 KIF21BO75037 1637 aa28.84■■■□□ 2.21
SIRPAP1-201ENST00000448467 UBTFP17480 764 aaKnown RBP28.79■■■□□ 2.2
SIRPAP1-201ENST00000448467 GOLGA3Q08378 1498 aa28.77■■■□□ 2.2
SIRPAP1-201ENST00000448467 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms