RNA–Protein interactions for RNA: ENST00000339452.2

DCHS2-201, Transcript of dachsous cadherin-related 2, humanhuman

TSL 1 (best) BASIC

Gene DCHS2, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS2-201ENST00000339452 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
DCHS2-201ENST00000339452 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
DCHS2-201ENST00000339452 SUPT5HO00267 1087 aaKnown RBP28.83■■■□□ 2.21
DCHS2-201ENST00000339452 PELP1Q8IZL8 1130 aaKnown RBP28.45■■■□□ 2.14
DCHS2-201ENST00000339452 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
DCHS2-201ENST00000339452 APLP2Q06481 763 aa27.63■■■□□ 2.01
DCHS2-201ENST00000339452 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
DCHS2-201ENST00000339452 ZEB1P37275 1124 aaPredicted RBP27.53■■■□□ 2
DCHS2-201ENST00000339452 PCGF6Q9BYE7 350 aa27.48■■□□□ 1.99
DCHS2-201ENST00000339452 CENPBP07199 599 aaPredicted RBP27.45■■□□□ 1.99
DCHS2-201ENST00000339452 MYT1Q01538 1121 aa27.27■■□□□ 1.96
DCHS2-201ENST00000339452 CCER1Q8TC90 406 aaPredicted RBP27.12■■□□□ 1.93
DCHS2-201ENST00000339452 FAM9AQ8IZU1 332 aaPredicted RBP27.11■■□□□ 1.93
DCHS2-201ENST00000339452 ERICH6Q7L0X2 663 aa27.04■■□□□ 1.92
DCHS2-201ENST00000339452 TRIM41Q8WV44 630 aa26.84■■□□□ 1.89
DCHS2-201ENST00000339452 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
DCHS2-201ENST00000339452 NEFLP07196 543 aa26.65■■□□□ 1.86
DCHS2-201ENST00000339452 TRIM26Q12899 539 aaPredicted RBP26.5■■□□□ 1.83
DCHS2-201ENST00000339452 HRCP23327 699 aa26.49■■□□□ 1.83
DCHS2-201ENST00000339452 UBTFP17480 764 aaKnown RBP26.42■■□□□ 1.82
DCHS2-201ENST00000339452 YTHDC1Q96MU7 727 aaKnown RBP26.36■■□□□ 1.81
DCHS2-201ENST00000339452 RANGAP1P46060 587 aaPredicted RBP26.31■■□□□ 1.8
DCHS2-201ENST00000339452 ATP1B4Q9UN42 357 aaPredicted RBP26.16■■□□□ 1.78
DCHS2-201ENST00000339452 ABCC9O60706 1549 aa25.98■■□□□ 1.75
DCHS2-201ENST00000339452 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
DCHS2-201ENST00000339452 PPARGC1BQ86YN6 1023 aaKnown RBP25.9■■□□□ 1.74
DCHS2-201ENST00000339452 DAXXQ9UER7 740 aaPredicted RBP25.79■■□□□ 1.72
DCHS2-201ENST00000339452 LOC105371045A0A1W2PR82 267 aa25.71■■□□□ 1.71
DCHS2-201ENST00000339452 DIEXFQ68CQ4 756 aaKnown RBP25.62■■□□□ 1.69
DCHS2-201ENST00000339452 HNRNPUL2Q1KMD3 747 aaKnown RBP25.54■■□□□ 1.68
DCHS2-201ENST00000339452 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
DCHS2-201ENST00000339452 ITGAEP38570 1179 aa25.49■■□□□ 1.67
DCHS2-201ENST00000339452 CCDC180Q9P1Z9 1646 aa25.47■■□□□ 1.67
DCHS2-201ENST00000339452 RTL5Q5HYW3 569 aaPredicted RBP25.43■■□□□ 1.66
DCHS2-201ENST00000339452 ZCCHC6Q5VYS8 1495 aaKnown RBP25.43■■□□□ 1.66
DCHS2-201ENST00000339452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.4■■□□□ 1.66
DCHS2-201ENST00000339452 POLR3GLQ9BT43 218 aa25.34■■□□□ 1.65
DCHS2-201ENST00000339452 GTF3C3Q9Y5Q9 886 aa25.22■■□□□ 1.63
DCHS2-201ENST00000339452 ZNF316A6NFI3 1004 aaPredicted RBP25.2■■□□□ 1.62
DCHS2-201ENST00000339452 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
DCHS2-201ENST00000339452 SCRIBQ14160 1630 aa25.03■■□□□ 1.6
DCHS2-201ENST00000339452 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
DCHS2-201ENST00000339452 ACIN1Q9UKV3 1341 aaKnown RBP25■■□□□ 1.59
DCHS2-201ENST00000339452 ANP32CO43423 234 aa24.99■■□□□ 1.59
DCHS2-201ENST00000339452 MYT1LQ9UL68 1186 aa24.98■■□□□ 1.59
DCHS2-201ENST00000339452 CNGB1Q14028 1251 aaPredicted RBP24.96■■□□□ 1.59
DCHS2-201ENST00000339452 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
DCHS2-201ENST00000339452 BCANQ96GW7 911 aa24.86■■□□□ 1.57
DCHS2-201ENST00000339452 NEUROD1Q13562 356 aa24.81■■□□□ 1.56
DCHS2-201ENST00000339452 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
DCHS2-201ENST00000339452 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
DCHS2-201ENST00000339452 RB1CC1Q8TDY2 1594 aa24.74■■□□□ 1.55
DCHS2-201ENST00000339452 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
DCHS2-201ENST00000339452 NACADO15069 1562 aa24.64■■□□□ 1.53
DCHS2-201ENST00000339452 DCAF1Q9Y4B6 1507 aa24.62■■□□□ 1.53
DCHS2-201ENST00000339452 ANP32AP39687 249 aaKnown RBP24.62■■□□□ 1.53
DCHS2-201ENST00000339452 ZBTB47Q9UFB7 747 aaPredicted RBP24.51■■□□□ 1.51
DCHS2-201ENST00000339452 FBLN2P98095 1184 aa24.43■■□□□ 1.5
DCHS2-201ENST00000339452 ZNF326Q5BKZ1 582 aaKnown RBP24.43■■□□□ 1.5
DCHS2-201ENST00000339452 SCAF1Q9H7N4 1312 aaKnown RBP24.4■■□□□ 1.5
DCHS2-201ENST00000339452 CANXP27824 592 aaKnown RBP24.38■■□□□ 1.49
DCHS2-201ENST00000339452 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
DCHS2-201ENST00000339452 FKBP8Q14318 412 aa24.34■■□□□ 1.49
DCHS2-201ENST00000339452 P3H3Q8IVL6 736 aa24.25■■□□□ 1.47
DCHS2-201ENST00000339452 NEFMP07197 916 aa24.23■■□□□ 1.47
DCHS2-201ENST00000339452 TONSLQ96HA7 1378 aa24.22■■□□□ 1.47
DCHS2-201ENST00000339452 NPM2Q86SE8 214 aaKnown RBP24.18■■□□□ 1.46
DCHS2-201ENST00000339452 ANP32BQ92688 251 aaKnown RBP24.17■■□□□ 1.46
DCHS2-201ENST00000339452 HNRNPUQ00839 825 aaKnown RBP eCLIP24.16■■□□□ 1.46
DCHS2-201ENST00000339452 EEA1Q15075 1411 aa24.13■■□□□ 1.45
DCHS2-201ENST00000339452 UPF2Q9HAU5 1272 aaKnown RBP24.1■■□□□ 1.45
DCHS2-201ENST00000339452 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
DCHS2-201ENST00000339452 GLIPR1L2Q4G1C9 344 aa24.09■■□□□ 1.45
DCHS2-201ENST00000339452 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
DCHS2-201ENST00000339452 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
DCHS2-201ENST00000339452 EIF5BO60841 1220 aaKnown RBP24.06■■□□□ 1.44
DCHS2-201ENST00000339452 CCDC136Q96JN2 1154 aa24■■□□□ 1.43
DCHS2-201ENST00000339452 ARID3CA6NKF2 412 aa23.98■■□□□ 1.43
DCHS2-201ENST00000339452 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
DCHS2-201ENST00000339452 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
DCHS2-201ENST00000339452 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.95■■□□□ 1.42
DCHS2-201ENST00000339452 HSP90AA1P07900 732 aaKnown RBP23.95■■□□□ 1.42
DCHS2-201ENST00000339452 ZNF777Q9ULD5 760 aaPredicted RBP23.91■■□□□ 1.42
DCHS2-201ENST00000339452 MIER1Q8N108 512 aa23.91■■□□□ 1.42
DCHS2-201ENST00000339452 CLIP1P30622 1438 aa23.9■■□□□ 1.42
DCHS2-201ENST00000339452 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
DCHS2-201ENST00000339452 TMC1Q8TDI8 760 aa23.87■■□□□ 1.41
DCHS2-201ENST00000339452 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
DCHS2-201ENST00000339452 CECR2Q9BXF3 1484 aa23.84■■□□□ 1.41
DCHS2-201ENST00000339452 BCL11AQ9H165 835 aa23.82■■□□□ 1.4
DCHS2-201ENST00000339452 MRS2Q9HD23 443 aa23.82■■□□□ 1.4
DCHS2-201ENST00000339452 NBR1Q14596 966 aa23.81■■□□□ 1.4
DCHS2-201ENST00000339452 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
DCHS2-201ENST00000339452 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
DCHS2-201ENST00000339452 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
DCHS2-201ENST00000339452 NPM1P06748 294 aaKnown RBP eCLIP23.75■■□□□ 1.39
DCHS2-201ENST00000339452 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
DCHS2-201ENST00000339452 DDRGK1Q96HY6 314 aa23.74■■□□□ 1.39
DCHS2-201ENST00000339452 CEP162Q5TB80 1403 aa23.73■■□□□ 1.39
DCHS2-201ENST00000339452 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms