RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 NISCHQ9Y2I1 1504 aa43.6■■■■■ 4.57
EGFR-202ENST00000342916 CCDC180Q9P1Z9 1646 aa38.31■■■■□ 3.72
EGFR-202ENST00000342916 ABCC9O60706 1549 aa36.89■■■■□ 3.5
EGFR-202ENST00000342916 ZCCHC6Q5VYS8 1495 aaKnown RBP36.5■■■■□ 3.43
EGFR-202ENST00000342916 DCAF8L2P0C7V8 631 aa36.28■■■■□ 3.4
EGFR-202ENST00000342916 DCAF1Q9Y4B6 1507 aa35.96■■■■□ 3.35
EGFR-202ENST00000342916 NACADO15069 1562 aa35.79■■■■□ 3.32
EGFR-202ENST00000342916 MYO15BQ96JP2 1530 aa35.75■■■■□ 3.31
EGFR-202ENST00000342916 RB1CC1Q8TDY2 1594 aa35.66■■■■□ 3.3
EGFR-202ENST00000342916 SHROOM4Q9ULL8 1493 aa35.24■■■■□ 3.23
EGFR-202ENST00000342916 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
EGFR-202ENST00000342916 UNC13AQ9UPW8 1703 aa35.09■■■■□ 3.21
EGFR-202ENST00000342916 BICRAQ9NZM4 1560 aa34.69■■■■□ 3.14
EGFR-202ENST00000342916 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
EGFR-202ENST00000342916 CECR2Q9BXF3 1484 aa34.01■■■■□ 3.03
EGFR-202ENST00000342916 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
EGFR-202ENST00000342916 BAZ1AQ9NRL2 1556 aaPredicted RBP33.69■■■□□ 2.98
EGFR-202ENST00000342916 SMARCA4P51532 1647 aa33.68■■■□□ 2.98
EGFR-202ENST00000342916 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
EGFR-202ENST00000342916 SUPT5HO00267 1087 aaKnown RBP33.61■■■□□ 2.97
EGFR-202ENST00000342916 RSF1Q96T23 1441 aaPredicted RBP33.59■■■□□ 2.97
EGFR-202ENST00000342916 WIZO95785 1651 aa33.45■■■□□ 2.95
EGFR-202ENST00000342916 CC2D2AQ9P2K1 1620 aa33.36■■■□□ 2.93
EGFR-202ENST00000342916 ATAD2BQ9ULI0 1458 aa33.26■■■□□ 2.91
EGFR-202ENST00000342916 PEG3Q9GZU2 1588 aa33.24■■■□□ 2.91
EGFR-202ENST00000342916 SMARCA2P51531 1590 aa33.19■■■□□ 2.9
EGFR-202ENST00000342916 DNAJC5BQ9UF47 199 aa33.17■■■□□ 2.9
EGFR-202ENST00000342916 NCAPD3P42695 1498 aa33.04■■■□□ 2.88
EGFR-202ENST00000342916 BAZ1BQ9UIG0 1483 aaKnown RBP33.04■■■□□ 2.88
EGFR-202ENST00000342916 TOP2AP11388 1531 aaKnown RBP32.99■■■□□ 2.87
EGFR-202ENST00000342916 HMGXB3Q12766 1538 aa32.95■■■□□ 2.87
EGFR-202ENST00000342916 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
EGFR-202ENST00000342916 CHIC1Q5VXU3 224 aa32.27■■■□□ 2.76
EGFR-202ENST00000342916 NESP48681 1621 aa32.22■■■□□ 2.75
EGFR-202ENST00000342916 CADPSQ9ULU8 1353 aa32.16■■■□□ 2.74
EGFR-202ENST00000342916 CFTRP13569 1480 aa32.15■■■□□ 2.74
EGFR-202ENST00000342916 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
EGFR-202ENST00000342916 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
EGFR-202ENST00000342916 ABCC8Q09428 1581 aa31.86■■■□□ 2.69
EGFR-202ENST00000342916 FANCD2Q9BXW9 1451 aa31.84■■■□□ 2.69
EGFR-202ENST00000342916 KIF21AQ7Z4S6 1674 aa31.84■■■□□ 2.69
EGFR-202ENST00000342916 PDS5BQ9NTI5 1447 aa31.78■■■□□ 2.68
EGFR-202ENST00000342916 CEP164Q9UPV0 1460 aa31.69■■■□□ 2.66
EGFR-202ENST00000342916 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
EGFR-202ENST00000342916 WRNQ14191 1432 aaPredicted RBP eCLIP31.61■■■□□ 2.65
EGFR-202ENST00000342916 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
EGFR-202ENST00000342916 CUX1P39880 1505 aa31.56■■■□□ 2.64
EGFR-202ENST00000342916 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
EGFR-202ENST00000342916 URB2Q14146 1524 aaKnown RBP31.52■■■□□ 2.64
EGFR-202ENST00000342916 TOP2BQ02880 1626 aa31.45■■■□□ 2.63
EGFR-202ENST00000342916 MRC2Q9UBG0 1479 aa31.45■■■□□ 2.63
EGFR-202ENST00000342916 BIVM-ERCC5R4GMW8 1640 aa31.44■■■□□ 2.62
EGFR-202ENST00000342916 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
EGFR-202ENST00000342916 THOC2Q8NI27 1593 aaKnown RBP31.44■■■□□ 2.62
EGFR-202ENST00000342916 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
EGFR-202ENST00000342916 WDR62O43379 1518 aa31.33■■■□□ 2.61
EGFR-202ENST00000342916 FGD5Q6ZNL6 1462 aa31.31■■■□□ 2.6
EGFR-202ENST00000342916 POLA1P09884 1462 aaPredicted RBP31.25■■■□□ 2.59
EGFR-202ENST00000342916 RAD54L2Q9Y4B4 1467 aa31.18■■■□□ 2.58
EGFR-202ENST00000342916 CUX2O14529 1486 aa31.13■■■□□ 2.57
EGFR-202ENST00000342916 SOGA1O94964 1423 aa31.1■■■□□ 2.57
EGFR-202ENST00000342916 LOC105371045A0A1W2PR82 267 aa31.09■■■□□ 2.57
EGFR-202ENST00000342916 RUSC2Q8N2Y8 1516 aa31.05■■■□□ 2.56
EGFR-202ENST00000342916 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
EGFR-202ENST00000342916 FAM9AQ8IZU1 332 aaPredicted RBP31.03■■■□□ 2.56
EGFR-202ENST00000342916 WDR97A6NE52 1622 aa31■■■□□ 2.55
EGFR-202ENST00000342916 ABCA10Q8WWZ4 1543 aa30.96■■■□□ 2.55
EGFR-202ENST00000342916 IFT140Q96RY7 1462 aa30.94■■■□□ 2.54
EGFR-202ENST00000342916 ZNF608Q9ULD9 1512 aaPredicted RBP30.92■■■□□ 2.54
EGFR-202ENST00000342916 TDRD9Q8NDG6 1382 aaKnown RBP30.91■■■□□ 2.54
EGFR-202ENST00000342916 KIF27Q86VH2 1401 aa30.83■■■□□ 2.53
EGFR-202ENST00000342916 AQRO60306 1485 aaKnown RBP eCLIP30.83■■■□□ 2.53
EGFR-202ENST00000342916 ABCA5Q8WWZ7 1642 aa30.82■■■□□ 2.52
EGFR-202ENST00000342916 EIF4G3O43432 1585 aaKnown RBP30.78■■■□□ 2.52
EGFR-202ENST00000342916 GAPVD1Q14C86 1478 aa30.76■■■□□ 2.51
EGFR-202ENST00000342916 EEA1Q15075 1411 aa30.71■■■□□ 2.51
EGFR-202ENST00000342916 PBRM1Q86U86 1689 aa30.7■■■□□ 2.5
EGFR-202ENST00000342916 CSRNP3Q8WYN3 585 aa30.69■■■□□ 2.5
EGFR-202ENST00000342916 EHMT2Q96KQ7 1210 aa30.69■■■□□ 2.5
EGFR-202ENST00000342916 IGF1RP08069 1367 aa30.67■■■□□ 2.5
EGFR-202ENST00000342916 GRIN2BQ13224 1484 aa30.58■■■□□ 2.49
EGFR-202ENST00000342916 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
EGFR-202ENST00000342916 SNAPC4Q5SXM2 1469 aa30.52■■■□□ 2.48
EGFR-202ENST00000342916 PRXQ9BXM0 1461 aa30.5■■■□□ 2.47
EGFR-202ENST00000342916 CUL7Q14999 1698 aa30.49■■■□□ 2.47
EGFR-202ENST00000342916 CARMIL1Q5VZK9 1371 aa30.48■■■□□ 2.47
EGFR-202ENST00000342916 RAPGEF2Q9Y4G8 1499 aa30.47■■■□□ 2.47
EGFR-202ENST00000342916 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
EGFR-202ENST00000342916 KIF21BO75037 1637 aa30.45■■■□□ 2.47
EGFR-202ENST00000342916 MAGI1Q96QZ7 1491 aaPredicted RBP30.39■■■□□ 2.46
EGFR-202ENST00000342916 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
EGFR-202ENST00000342916 GOLGA3Q08378 1498 aa30.34■■■□□ 2.45
EGFR-202ENST00000342916 FBLN2P98095 1184 aa30.32■■■□□ 2.45
EGFR-202ENST00000342916 SYNJ2O15056 1496 aa30.3■■■□□ 2.44
EGFR-202ENST00000342916 CHD1O14646 1710 aa30.28■■■□□ 2.44
EGFR-202ENST00000342916 UBTFP17480 764 aaKnown RBP30.27■■■□□ 2.44
EGFR-202ENST00000342916 CHMP7Q8WUX9 453 aaPredicted RBP30.26■■■□□ 2.43
EGFR-202ENST00000342916 GRIN2AQ12879 1464 aa30.24■■■□□ 2.43
EGFR-202ENST00000342916 TNIKQ9UKE5 1360 aa30.24■■■□□ 2.43
EGFR-202ENST00000342916 CEP162Q5TB80 1403 aa30.15■■■□□ 2.42
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