RNA–Protein interactions for RNA: ENST00000356896.8

IFFO1-202, Transcript of intermediate filament family orphan 1, humanhuman

TSL 5 BASIC

Gene IFFO1, Length 2,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-202ENST00000356896 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
IFFO1-202ENST00000356896 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
IFFO1-202ENST00000356896 CCDC180Q9P1Z9 1646 aa32.09■■■□□ 2.73
IFFO1-202ENST00000356896 ZCCHC6Q5VYS8 1495 aaKnown RBP32.07■■■□□ 2.72
IFFO1-202ENST00000356896 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
IFFO1-202ENST00000356896 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
IFFO1-202ENST00000356896 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
IFFO1-202ENST00000356896 CHIC1Q5VXU3 224 aa30.94■■■□□ 2.54
IFFO1-202ENST00000356896 DCAF1Q9Y4B6 1507 aa30.92■■■□□ 2.54
IFFO1-202ENST00000356896 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
IFFO1-202ENST00000356896 ABCC9O60706 1549 aa30.28■■■□□ 2.44
IFFO1-202ENST00000356896 LOC105371045A0A1W2PR82 267 aa30.19■■■□□ 2.42
IFFO1-202ENST00000356896 PCGF6Q9BYE7 350 aa30.09■■■□□ 2.41
IFFO1-202ENST00000356896 RSF1Q96T23 1441 aaPredicted RBP30.07■■■□□ 2.4
IFFO1-202ENST00000356896 HRCP23327 699 aa29.94■■■□□ 2.38
IFFO1-202ENST00000356896 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
IFFO1-202ENST00000356896 CECR2Q9BXF3 1484 aa29.75■■■□□ 2.35
IFFO1-202ENST00000356896 NACADO15069 1562 aa29.69■■■□□ 2.34
IFFO1-202ENST00000356896 TRIM41Q8WV44 630 aa29.62■■■□□ 2.33
IFFO1-202ENST00000356896 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
IFFO1-202ENST00000356896 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
IFFO1-202ENST00000356896 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
IFFO1-202ENST00000356896 EHMT2Q96KQ7 1210 aa29.51■■■□□ 2.31
IFFO1-202ENST00000356896 WIZO95785 1651 aa29.46■■■□□ 2.31
IFFO1-202ENST00000356896 TRIM26Q12899 539 aaPredicted RBP29.31■■■□□ 2.28
IFFO1-202ENST00000356896 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
IFFO1-202ENST00000356896 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
IFFO1-202ENST00000356896 EIF4G1Q04637 1599 aaKnown RBP28.98■■■□□ 2.23
IFFO1-202ENST00000356896 SMARCA4P51532 1647 aa28.9■■■□□ 2.22
IFFO1-202ENST00000356896 ABCC8Q09428 1581 aa28.87■■■□□ 2.21
IFFO1-202ENST00000356896 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
IFFO1-202ENST00000356896 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
IFFO1-202ENST00000356896 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
IFFO1-202ENST00000356896 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
IFFO1-202ENST00000356896 BICRAQ9NZM4 1560 aa28.6■■■□□ 2.17
IFFO1-202ENST00000356896 SOGA1O94964 1423 aa28.57■■■□□ 2.16
IFFO1-202ENST00000356896 TTBK1Q5TCY1 1321 aaPredicted RBP28.53■■■□□ 2.16
IFFO1-202ENST00000356896 ZEB1P37275 1124 aaPredicted RBP28.48■■■□□ 2.15
IFFO1-202ENST00000356896 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
IFFO1-202ENST00000356896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
IFFO1-202ENST00000356896 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
IFFO1-202ENST00000356896 CSRNP3Q8WYN3 585 aa28.27■■■□□ 2.12
IFFO1-202ENST00000356896 UBTFP17480 764 aaKnown RBP28.26■■■□□ 2.11
IFFO1-202ENST00000356896 WRNQ14191 1432 aaPredicted RBP eCLIP28.22■■■□□ 2.11
IFFO1-202ENST00000356896 PEG3Q9GZU2 1588 aa28.22■■■□□ 2.11
IFFO1-202ENST00000356896 TNIKQ9UKE5 1360 aa28.19■■■□□ 2.1
IFFO1-202ENST00000356896 SYNJ1O43426 1573 aa28.17■■■□□ 2.1
IFFO1-202ENST00000356896 CCER1Q8TC90 406 aaPredicted RBP28.17■■■□□ 2.1
IFFO1-202ENST00000356896 ATAD2BQ9ULI0 1458 aa28.16■■■□□ 2.1
IFFO1-202ENST00000356896 EEA1Q15075 1411 aa28.1■■■□□ 2.09
IFFO1-202ENST00000356896 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
IFFO1-202ENST00000356896 GOLGA3Q08378 1498 aa28.06■■■□□ 2.08
IFFO1-202ENST00000356896 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
IFFO1-202ENST00000356896 CEP164Q9UPV0 1460 aa27.88■■■□□ 2.05
IFFO1-202ENST00000356896 RAPGEF2Q9Y4G8 1499 aa27.84■■■□□ 2.05
IFFO1-202ENST00000356896 KIF21BO75037 1637 aa27.82■■■□□ 2.04
IFFO1-202ENST00000356896 CLIP1P30622 1438 aa27.8■■■□□ 2.04
IFFO1-202ENST00000356896 HNRNPUL2Q1KMD3 747 aaKnown RBP27.71■■■□□ 2.03
IFFO1-202ENST00000356896 SCAF1Q9H7N4 1312 aaKnown RBP27.7■■■□□ 2.02
IFFO1-202ENST00000356896 TOP2BQ02880 1626 aa27.7■■■□□ 2.02
IFFO1-202ENST00000356896 VPS8Q8N3P4 1428 aa27.64■■■□□ 2.02
IFFO1-202ENST00000356896 DIEXFQ68CQ4 756 aaKnown RBP27.58■■■□□ 2.01
IFFO1-202ENST00000356896 BIVM-ERCC5R4GMW8 1640 aa27.57■■■□□ 2
IFFO1-202ENST00000356896 CUX1P39880 1505 aa27.53■■■□□ 2
IFFO1-202ENST00000356896 NCAPD3P42695 1498 aa27.53■■■□□ 2
IFFO1-202ENST00000356896 HMGXB3Q12766 1538 aa27.5■■□□□ 1.99
IFFO1-202ENST00000356896 APLP2Q06481 763 aa27.49■■□□□ 1.99
IFFO1-202ENST00000356896 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
IFFO1-202ENST00000356896 NEUROD1Q13562 356 aa27.42■■□□□ 1.98
IFFO1-202ENST00000356896 ARAP1Q96P48 1450 aa27.39■■□□□ 1.97
IFFO1-202ENST00000356896 CFTRP13569 1480 aa27.36■■□□□ 1.97
IFFO1-202ENST00000356896 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
IFFO1-202ENST00000356896 KANK4Q5T7N3 995 aaPredicted RBP27.34■■□□□ 1.97
IFFO1-202ENST00000356896 ZNF316A6NFI3 1004 aaPredicted RBP27.32■■□□□ 1.96
IFFO1-202ENST00000356896 ACIN1Q9UKV3 1341 aaKnown RBP27.32■■□□□ 1.96
IFFO1-202ENST00000356896 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
IFFO1-202ENST00000356896 ARHGAP35Q9NRY4 1499 aa27.15■■□□□ 1.94
IFFO1-202ENST00000356896 CUX2O14529 1486 aa27.14■■□□□ 1.94
IFFO1-202ENST00000356896 YTHDC1Q96MU7 727 aaKnown RBP27.13■■□□□ 1.93
IFFO1-202ENST00000356896 GTF3C3Q9Y5Q9 886 aa27.1■■□□□ 1.93
IFFO1-202ENST00000356896 MIER1Q8N108 512 aa27.07■■□□□ 1.92
IFFO1-202ENST00000356896 IGF1RP08069 1367 aa27.06■■□□□ 1.92
IFFO1-202ENST00000356896 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
IFFO1-202ENST00000356896 PRDM2Q13029 1718 aa27.06■■□□□ 1.92
IFFO1-202ENST00000356896 CENPBP07199 599 aaPredicted RBP27.05■■□□□ 1.92
IFFO1-202ENST00000356896 DHX57Q6P158 1386 aaKnown RBP27.04■■□□□ 1.92
IFFO1-202ENST00000356896 ITGAEP38570 1179 aa27.04■■□□□ 1.92
IFFO1-202ENST00000356896 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
IFFO1-202ENST00000356896 RRBP1Q9P2E9 1410 aaKnown RBP26.97■■□□□ 1.91
IFFO1-202ENST00000356896 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
IFFO1-202ENST00000356896 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
IFFO1-202ENST00000356896 P3H3Q8IVL6 736 aa26.91■■□□□ 1.9
IFFO1-202ENST00000356896 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
IFFO1-202ENST00000356896 CCNB3Q8WWL7 1395 aa26.9■■□□□ 1.9
IFFO1-202ENST00000356896 FANCD2Q9BXW9 1451 aa26.85■■□□□ 1.89
IFFO1-202ENST00000356896 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
IFFO1-202ENST00000356896 NESP48681 1621 aa26.83■■□□□ 1.89
IFFO1-202ENST00000356896 TIAM1Q13009 1591 aa26.8■■□□□ 1.88
IFFO1-202ENST00000356896 ATP1B4Q9UN42 357 aaPredicted RBP26.78■■□□□ 1.88
IFFO1-202ENST00000356896 CLSPNQ9HAW4 1339 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms