RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 NISCHQ9Y2I1 1504 aa50.28■■■■■ 5.64
COL19A1-203ENST00000478620 CCDC180Q9P1Z9 1646 aa44.54■■■■■ 4.72
COL19A1-203ENST00000478620 ABCC9O60706 1549 aa43.68■■■■■ 4.58
COL19A1-203ENST00000478620 DCAF8L2P0C7V8 631 aa42.34■■■■■ 4.37
COL19A1-203ENST00000478620 RB1CC1Q8TDY2 1594 aa41.99■■■■■ 4.31
COL19A1-203ENST00000478620 NACADO15069 1562 aa41.95■■■■■ 4.31
COL19A1-203ENST00000478620 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
COL19A1-203ENST00000478620 MYO15BQ96JP2 1530 aa41.64■■■■■ 4.26
COL19A1-203ENST00000478620 DCAF1Q9Y4B6 1507 aa41.53■■■■■ 4.24
COL19A1-203ENST00000478620 PABPN1Q86U42 306 aaKnown RBP eCLIP40.96■■■■■ 4.15
COL19A1-203ENST00000478620 UNC13AQ9UPW8 1703 aa40.91■■■■■ 4.14
COL19A1-203ENST00000478620 SCRIBQ14160 1630 aa40.78■■■■■ 4.12
COL19A1-203ENST00000478620 BICRAQ9NZM4 1560 aa40.63■■■■■ 4.09
COL19A1-203ENST00000478620 SHROOM4Q9ULL8 1493 aa40.19■■■■■ 4.02
COL19A1-203ENST00000478620 DNAJC5BQ9UF47 199 aa40.02■■■■■ 4
COL19A1-203ENST00000478620 EIF4G1Q04637 1599 aaKnown RBP39.6■■■■□ 3.93
COL19A1-203ENST00000478620 CC2D2AQ9P2K1 1620 aa39.43■■■■□ 3.9
COL19A1-203ENST00000478620 CECR2Q9BXF3 1484 aa39.22■■■■□ 3.87
COL19A1-203ENST00000478620 BAZ1AQ9NRL2 1556 aaPredicted RBP38.96■■■■□ 3.83
COL19A1-203ENST00000478620 SMARCA4P51532 1647 aa38.96■■■■□ 3.83
COL19A1-203ENST00000478620 ATAD2BQ9ULI0 1458 aa38.77■■■■□ 3.8
COL19A1-203ENST00000478620 MROH2BQ7Z745 1585 aa38.76■■■■□ 3.8
COL19A1-203ENST00000478620 NCAPD3P42695 1498 aa38.73■■■■□ 3.79
COL19A1-203ENST00000478620 SMARCA2P51531 1590 aa38.72■■■■□ 3.79
COL19A1-203ENST00000478620 PEG3Q9GZU2 1588 aa38.5■■■■□ 3.75
COL19A1-203ENST00000478620 BAZ1BQ9UIG0 1483 aaKnown RBP38.49■■■■□ 3.75
COL19A1-203ENST00000478620 HMGXB3Q12766 1538 aa38.47■■■■□ 3.75
COL19A1-203ENST00000478620 RSF1Q96T23 1441 aaPredicted RBP38.39■■■■□ 3.74
COL19A1-203ENST00000478620 WIZO95785 1651 aa38.35■■■■□ 3.73
COL19A1-203ENST00000478620 TOP2AP11388 1531 aaKnown RBP37.92■■■■□ 3.66
COL19A1-203ENST00000478620 NESP48681 1621 aa37.79■■■■□ 3.64
COL19A1-203ENST00000478620 SUPT5HO00267 1087 aaKnown RBP37.76■■■■□ 3.64
COL19A1-203ENST00000478620 ERCC6Q03468 1493 aa37.69■■■■□ 3.62
COL19A1-203ENST00000478620 CADPSQ9ULU8 1353 aa37.67■■■■□ 3.62
COL19A1-203ENST00000478620 LAMC3Q9Y6N6 1575 aa37.66■■■■□ 3.62
COL19A1-203ENST00000478620 CCDC88BA6NC98 1476 aa37.55■■■■□ 3.6
COL19A1-203ENST00000478620 PDS5BQ9NTI5 1447 aa37.52■■■■□ 3.6
COL19A1-203ENST00000478620 CFTRP13569 1480 aa37.39■■■■□ 3.58
COL19A1-203ENST00000478620 KIF21AQ7Z4S6 1674 aa37.27■■■■□ 3.56
COL19A1-203ENST00000478620 FANCD2Q9BXW9 1451 aa37.21■■■■□ 3.55
COL19A1-203ENST00000478620 CEP164Q9UPV0 1460 aa37.15■■■■□ 3.54
COL19A1-203ENST00000478620 CUX2O14529 1486 aa37.13■■■■□ 3.53
COL19A1-203ENST00000478620 THOC2Q8NI27 1593 aaKnown RBP37.07■■■■□ 3.52
COL19A1-203ENST00000478620 MRC2Q9UBG0 1479 aa37.06■■■■□ 3.52
COL19A1-203ENST00000478620 PRDM2Q13029 1718 aa37■■■■□ 3.51
COL19A1-203ENST00000478620 WDR62O43379 1518 aa36.85■■■■□ 3.49
COL19A1-203ENST00000478620 URB2Q14146 1524 aaKnown RBP36.79■■■■□ 3.48
COL19A1-203ENST00000478620 ABCC8Q09428 1581 aa36.64■■■■□ 3.46
COL19A1-203ENST00000478620 TOPBP1Q92547 1522 aa36.6■■■■□ 3.45
COL19A1-203ENST00000478620 DNMBPQ6XZF7 1577 aa36.53■■■■□ 3.44
COL19A1-203ENST00000478620 IFT140Q96RY7 1462 aa36.37■■■■□ 3.41
COL19A1-203ENST00000478620 CUX1P39880 1505 aa36.35■■■■□ 3.41
COL19A1-203ENST00000478620 POLA1P09884 1462 aaPredicted RBP36.29■■■■□ 3.4
COL19A1-203ENST00000478620 SOGA1O94964 1423 aa36.25■■■■□ 3.39
COL19A1-203ENST00000478620 FGD5Q6ZNL6 1462 aa36.24■■■■□ 3.39
COL19A1-203ENST00000478620 WRNQ14191 1432 aaPredicted RBP eCLIP36.23■■■■□ 3.39
COL19A1-203ENST00000478620 RAD54L2Q9Y4B4 1467 aa36.2■■■■□ 3.39
COL19A1-203ENST00000478620 ZNF608Q9ULD9 1512 aaPredicted RBP36.18■■■■□ 3.38
COL19A1-203ENST00000478620 TARBP1Q13395 1621 aaKnown RBP36.12■■■■□ 3.37
COL19A1-203ENST00000478620 AQRO60306 1485 aaKnown RBP eCLIP36.06■■■■□ 3.36
COL19A1-203ENST00000478620 TDRD9Q8NDG6 1382 aaKnown RBP36.04■■■■□ 3.36
COL19A1-203ENST00000478620 SYNJ1O43426 1573 aa36.04■■■■□ 3.36
COL19A1-203ENST00000478620 TOP2BQ02880 1626 aa36.04■■■■□ 3.36
COL19A1-203ENST00000478620 BIVM-ERCC5R4GMW8 1640 aa36■■■■□ 3.35
COL19A1-203ENST00000478620 DNAJC5Q9H3Z4 198 aa35.99■■■■□ 3.35
COL19A1-203ENST00000478620 EIF4G3O43432 1585 aaKnown RBP35.98■■■■□ 3.35
COL19A1-203ENST00000478620 ABCA10Q8WWZ4 1543 aa35.86■■■■□ 3.33
COL19A1-203ENST00000478620 WDR97A6NE52 1622 aa35.82■■■■□ 3.32
COL19A1-203ENST00000478620 OSCARQ8IYS5 282 aa35.81■■■■□ 3.32
COL19A1-203ENST00000478620 FBLN2P98095 1184 aa35.79■■■■□ 3.32
COL19A1-203ENST00000478620 GAPVD1Q14C86 1478 aa35.79■■■■□ 3.32
COL19A1-203ENST00000478620 GRIN2BQ13224 1484 aa35.76■■■■□ 3.32
COL19A1-203ENST00000478620 SNAPC4Q5SXM2 1469 aa35.68■■■■□ 3.3
COL19A1-203ENST00000478620 CHMP7Q8WUX9 453 aaPredicted RBP35.65■■■■□ 3.3
COL19A1-203ENST00000478620 ABCA5Q8WWZ7 1642 aa35.65■■■■□ 3.3
COL19A1-203ENST00000478620 TRIM41Q8WV44 630 aa35.63■■■■□ 3.29
COL19A1-203ENST00000478620 MAGI1Q96QZ7 1491 aaPredicted RBP35.6■■■■□ 3.29
COL19A1-203ENST00000478620 PBRM1Q86U86 1689 aa35.59■■■■□ 3.29
COL19A1-203ENST00000478620 CHD1O14646 1710 aa35.51■■■■□ 3.27
COL19A1-203ENST00000478620 KIF27Q86VH2 1401 aa35.49■■■■□ 3.27
COL19A1-203ENST00000478620 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
COL19A1-203ENST00000478620 ERICH3Q5RHP9 1530 aa35.43■■■■□ 3.26
COL19A1-203ENST00000478620 FHAD1B1AJZ9 1412 aa35.38■■■■□ 3.25
COL19A1-203ENST00000478620 IGF1RP08069 1367 aa35.33■■■■□ 3.25
COL19A1-203ENST00000478620 ADAMTS12P58397 1594 aa35.32■■■■□ 3.24
COL19A1-203ENST00000478620 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
COL19A1-203ENST00000478620 CHIC1Q5VXU3 224 aa35.2■■■■□ 3.23
COL19A1-203ENST00000478620 RUSC2Q8N2Y8 1516 aa35.17■■■■□ 3.22
COL19A1-203ENST00000478620 CARMIL1Q5VZK9 1371 aa35.16■■■■□ 3.22
COL19A1-203ENST00000478620 CUL7Q14999 1698 aa35.11■■■■□ 3.21
COL19A1-203ENST00000478620 CLASP1Q7Z460 1538 aa35.1■■■■□ 3.21
COL19A1-203ENST00000478620 NUP160Q12769 1436 aa35.07■■■■□ 3.21
COL19A1-203ENST00000478620 ARHGEF11O15085 1522 aa35.05■■■■□ 3.2
COL19A1-203ENST00000478620 CEP170Q5SW79 1584 aa35.04■■■■□ 3.2
COL19A1-203ENST00000478620 RIMBP3CA6NJZ7 1639 aa35.03■■■■□ 3.2
COL19A1-203ENST00000478620 RIMBP3BA6NNM3 1639 aa35.03■■■■□ 3.2
COL19A1-203ENST00000478620 RIMBP3Q9UFD9 1639 aa35.03■■■■□ 3.2
COL19A1-203ENST00000478620 FAM9AQ8IZU1 332 aaPredicted RBP34.94■■■■□ 3.18
COL19A1-203ENST00000478620 CYB5RLQ6IPT4 315 aa34.93■■■■□ 3.18
COL19A1-203ENST00000478620 CSRNP3Q8WYN3 585 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms