RNA–Protein interactions for RNA: ENST00000523149.5

EXTL3-213, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 5 BASIC

Gene EXTL3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-213ENST00000523149 NISCHQ9Y2I1 1504 aa48.89■■■■■ 5.42
EXTL3-213ENST00000523149 CCDC180Q9P1Z9 1646 aa43.17■■■■■ 4.5
EXTL3-213ENST00000523149 ABCC9O60706 1549 aa41.82■■■■■ 4.28
EXTL3-213ENST00000523149 ZCCHC6Q5VYS8 1495 aaKnown RBP40.85■■■■■ 4.13
EXTL3-213ENST00000523149 DCAF8L2P0C7V8 631 aa40.63■■■■■ 4.1
EXTL3-213ENST00000523149 NACADO15069 1562 aa40.42■■■■■ 4.06
EXTL3-213ENST00000523149 DCAF1Q9Y4B6 1507 aa40.38■■■■■ 4.05
EXTL3-213ENST00000523149 RB1CC1Q8TDY2 1594 aa40.34■■■■■ 4.05
EXTL3-213ENST00000523149 MYO15BQ96JP2 1530 aa40.31■■■■■ 4.04
EXTL3-213ENST00000523149 UNC13AQ9UPW8 1703 aa39.64■■■■□ 3.94
EXTL3-213ENST00000523149 SCRIBQ14160 1630 aa39.56■■■■□ 3.92
EXTL3-213ENST00000523149 BICRAQ9NZM4 1560 aa39.25■■■■□ 3.87
EXTL3-213ENST00000523149 PABPN1Q86U42 306 aaKnown RBP eCLIP39.18■■■■□ 3.86
EXTL3-213ENST00000523149 SHROOM4Q9ULL8 1493 aa39.09■■■■□ 3.85
EXTL3-213ENST00000523149 CECR2Q9BXF3 1484 aa38.12■■■■□ 3.69
EXTL3-213ENST00000523149 EIF4G1Q04637 1599 aaKnown RBP38.11■■■■□ 3.69
EXTL3-213ENST00000523149 DNAJC5BQ9UF47 199 aa37.96■■■■□ 3.67
EXTL3-213ENST00000523149 SMARCA4P51532 1647 aa37.84■■■■□ 3.65
EXTL3-213ENST00000523149 CC2D2AQ9P2K1 1620 aa37.84■■■■□ 3.65
EXTL3-213ENST00000523149 BAZ1AQ9NRL2 1556 aaPredicted RBP37.8■■■■□ 3.64
EXTL3-213ENST00000523149 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.64
EXTL3-213ENST00000523149 RSF1Q96T23 1441 aaPredicted RBP37.48■■■■□ 3.59
EXTL3-213ENST00000523149 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
EXTL3-213ENST00000523149 WIZO95785 1651 aa37.42■■■■□ 3.58
EXTL3-213ENST00000523149 PEG3Q9GZU2 1588 aa37.41■■■■□ 3.58
EXTL3-213ENST00000523149 SMARCA2P51531 1590 aa37.38■■■■□ 3.57
EXTL3-213ENST00000523149 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
EXTL3-213ENST00000523149 HMGXB3Q12766 1538 aa37.18■■■■□ 3.54
EXTL3-213ENST00000523149 BAZ1BQ9UIG0 1483 aaKnown RBP37.16■■■■□ 3.54
EXTL3-213ENST00000523149 SUPT5HO00267 1087 aaKnown RBP36.99■■■■□ 3.51
EXTL3-213ENST00000523149 TOP2AP11388 1531 aaKnown RBP36.94■■■■□ 3.5
EXTL3-213ENST00000523149 CCDC88BA6NC98 1476 aa36.55■■■■□ 3.44
EXTL3-213ENST00000523149 NESP48681 1621 aa36.41■■■■□ 3.42
EXTL3-213ENST00000523149 CADPSQ9ULU8 1353 aa36.25■■■■□ 3.39
EXTL3-213ENST00000523149 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
EXTL3-213ENST00000523149 CFTRP13569 1480 aa36.18■■■■□ 3.38
EXTL3-213ENST00000523149 PRDM2Q13029 1718 aa36■■■■□ 3.35
EXTL3-213ENST00000523149 KIF21AQ7Z4S6 1674 aa35.99■■■■□ 3.35
EXTL3-213ENST00000523149 PDS5BQ9NTI5 1447 aa35.92■■■■□ 3.34
EXTL3-213ENST00000523149 ERCC6Q03468 1493 aa35.9■■■■□ 3.34
EXTL3-213ENST00000523149 FANCD2Q9BXW9 1451 aa35.88■■■■□ 3.33
EXTL3-213ENST00000523149 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
EXTL3-213ENST00000523149 THOC2Q8NI27 1593 aaKnown RBP35.68■■■■□ 3.3
EXTL3-213ENST00000523149 MRC2Q9UBG0 1479 aa35.58■■■■□ 3.29
EXTL3-213ENST00000523149 URB2Q14146 1524 aaKnown RBP35.55■■■■□ 3.28
EXTL3-213ENST00000523149 WDR62O43379 1518 aa35.48■■■■□ 3.27
EXTL3-213ENST00000523149 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
EXTL3-213ENST00000523149 TOPBP1Q92547 1522 aa35.39■■■■□ 3.26
EXTL3-213ENST00000523149 CUX1P39880 1505 aa35.38■■■■□ 3.26
EXTL3-213ENST00000523149 DNMBPQ6XZF7 1577 aa35.37■■■■□ 3.25
EXTL3-213ENST00000523149 WRNQ14191 1432 aaPredicted RBP eCLIP35.28■■■■□ 3.24
EXTL3-213ENST00000523149 SYNJ1O43426 1573 aa35.27■■■■□ 3.24
EXTL3-213ENST00000523149 CUX2O14529 1486 aa35.26■■■■□ 3.24
EXTL3-213ENST00000523149 BIVM-ERCC5R4GMW8 1640 aa35.17■■■■□ 3.22
EXTL3-213ENST00000523149 TOP2BQ02880 1626 aa35.17■■■■□ 3.22
EXTL3-213ENST00000523149 POLA1P09884 1462 aaPredicted RBP35.14■■■■□ 3.22
EXTL3-213ENST00000523149 FGD5Q6ZNL6 1462 aa35.14■■■■□ 3.22
EXTL3-213ENST00000523149 RAD54L2Q9Y4B4 1467 aa35.03■■■■□ 3.2
EXTL3-213ENST00000523149 TARBP1Q13395 1621 aaKnown RBP35■■■■□ 3.19
EXTL3-213ENST00000523149 SOGA1O94964 1423 aa34.95■■■■□ 3.19
EXTL3-213ENST00000523149 IFT140Q96RY7 1462 aa34.94■■■■□ 3.18
EXTL3-213ENST00000523149 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
EXTL3-213ENST00000523149 WDR97A6NE52 1622 aa34.86■■■■□ 3.17
EXTL3-213ENST00000523149 CHIC1Q5VXU3 224 aa34.82■■■■□ 3.17
EXTL3-213ENST00000523149 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
EXTL3-213ENST00000523149 ABCA10Q8WWZ4 1543 aa34.77■■■■□ 3.16
EXTL3-213ENST00000523149 EIF4G3O43432 1585 aaKnown RBP34.76■■■■□ 3.15
EXTL3-213ENST00000523149 TDRD9Q8NDG6 1382 aaKnown RBP34.76■■■■□ 3.15
EXTL3-213ENST00000523149 AQRO60306 1485 aaKnown RBP eCLIP34.73■■■■□ 3.15
EXTL3-213ENST00000523149 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
EXTL3-213ENST00000523149 GAPVD1Q14C86 1478 aa34.57■■■■□ 3.12
EXTL3-213ENST00000523149 PBRM1Q86U86 1689 aa34.53■■■■□ 3.12
EXTL3-213ENST00000523149 RUSC2Q8N2Y8 1516 aa34.51■■■■□ 3.12
EXTL3-213ENST00000523149 GRIN2BQ13224 1484 aa34.45■■■■□ 3.11
EXTL3-213ENST00000523149 KIF27Q86VH2 1401 aa34.45■■■■□ 3.11
EXTL3-213ENST00000523149 SNAPC4Q5SXM2 1469 aa34.4■■■■□ 3.1
EXTL3-213ENST00000523149 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
EXTL3-213ENST00000523149 IGF1RP08069 1367 aa34.31■■■■□ 3.08
EXTL3-213ENST00000523149 MAGI1Q96QZ7 1491 aaPredicted RBP34.29■■■■□ 3.08
EXTL3-213ENST00000523149 ADAMTS12P58397 1594 aa34.27■■■■□ 3.08
EXTL3-213ENST00000523149 CHD1O14646 1710 aa34.24■■■■□ 3.07
EXTL3-213ENST00000523149 FAM9AQ8IZU1 332 aaPredicted RBP34.2■■■■□ 3.07
EXTL3-213ENST00000523149 SYNJ2O15056 1496 aa34.18■■■■□ 3.06
EXTL3-213ENST00000523149 FBLN2P98095 1184 aa34.16■■■■□ 3.06
EXTL3-213ENST00000523149 CUL7Q14999 1698 aa34.15■■■■□ 3.06
EXTL3-213ENST00000523149 FHAD1B1AJZ9 1412 aa34.15■■■■□ 3.06
EXTL3-213ENST00000523149 CHMP7Q8WUX9 453 aaPredicted RBP34.09■■■■□ 3.05
EXTL3-213ENST00000523149 EEA1Q15075 1411 aa34.09■■■■□ 3.05
EXTL3-213ENST00000523149 CARMIL1Q5VZK9 1371 aa34.08■■■■□ 3.05
EXTL3-213ENST00000523149 GRIN2AQ12879 1464 aa34.06■■■■□ 3.04
EXTL3-213ENST00000523149 CSRNP3Q8WYN3 585 aa34.06■■■■□ 3.04
EXTL3-213ENST00000523149 PRXQ9BXM0 1461 aa33.99■■■■□ 3.03
EXTL3-213ENST00000523149 RAPGEF2Q9Y4G8 1499 aa33.94■■■■□ 3.02
EXTL3-213ENST00000523149 CEP170Q5SW79 1584 aa33.93■■■■□ 3.02
EXTL3-213ENST00000523149 OSCARQ8IYS5 282 aa33.92■■■■□ 3.02
EXTL3-213ENST00000523149 NUP160Q12769 1436 aa33.86■■■■□ 3.01
EXTL3-213ENST00000523149 KIF21BO75037 1637 aa33.82■■■■□ 3
EXTL3-213ENST00000523149 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
EXTL3-213ENST00000523149 EHMT2Q96KQ7 1210 aa33.8■■■■□ 3
EXTL3-213ENST00000523149 CTTNBP2Q8WZ74 1663 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms