RNA–Protein interactions for RNA: ENST00000601712.5

SPHK2-213, Transcript of sphingosine kinase 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPHK2, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2-213ENST00000601712 NISCHQ9Y2I1 1504 aa48.66■■■■■ 5.38
SPHK2-213ENST00000601712 CCDC180Q9P1Z9 1646 aa43.11■■■■■ 4.49
SPHK2-213ENST00000601712 ABCC9O60706 1549 aa41.67■■■■■ 4.26
SPHK2-213ENST00000601712 ZCCHC6Q5VYS8 1495 aaKnown RBP40.62■■■■■ 4.09
SPHK2-213ENST00000601712 DCAF8L2P0C7V8 631 aa40.47■■■■■ 4.07
SPHK2-213ENST00000601712 NACADO15069 1562 aa40.4■■■■■ 4.06
SPHK2-213ENST00000601712 RB1CC1Q8TDY2 1594 aa40.34■■■■■ 4.05
SPHK2-213ENST00000601712 MYO15BQ96JP2 1530 aa40.31■■■■■ 4.04
SPHK2-213ENST00000601712 DCAF1Q9Y4B6 1507 aa40.3■■■■■ 4.04
SPHK2-213ENST00000601712 UNC13AQ9UPW8 1703 aa39.44■■■■□ 3.9
SPHK2-213ENST00000601712 SCRIBQ14160 1630 aa39.32■■■■□ 3.89
SPHK2-213ENST00000601712 BICRAQ9NZM4 1560 aa39.05■■■■□ 3.84
SPHK2-213ENST00000601712 PABPN1Q86U42 306 aaKnown RBP eCLIP39■■■■□ 3.83
SPHK2-213ENST00000601712 SHROOM4Q9ULL8 1493 aa38.74■■■■□ 3.79
SPHK2-213ENST00000601712 EIF4G1Q04637 1599 aaKnown RBP38.01■■■■□ 3.67
SPHK2-213ENST00000601712 CECR2Q9BXF3 1484 aa37.81■■■■□ 3.64
SPHK2-213ENST00000601712 DNAJC5BQ9UF47 199 aa37.77■■■■□ 3.64
SPHK2-213ENST00000601712 CC2D2AQ9P2K1 1620 aa37.74■■■■□ 3.63
SPHK2-213ENST00000601712 BAZ1AQ9NRL2 1556 aaPredicted RBP37.71■■■■□ 3.63
SPHK2-213ENST00000601712 SMARCA4P51532 1647 aa37.67■■■■□ 3.62
SPHK2-213ENST00000601712 MROH2BQ7Z745 1585 aa37.48■■■■□ 3.59
SPHK2-213ENST00000601712 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
SPHK2-213ENST00000601712 ATAD2BQ9ULI0 1458 aa37.32■■■■□ 3.56
SPHK2-213ENST00000601712 PEG3Q9GZU2 1588 aa37.29■■■■□ 3.56
SPHK2-213ENST00000601712 NCAPD3P42695 1498 aa37.24■■■■□ 3.55
SPHK2-213ENST00000601712 RSF1Q96T23 1441 aaPredicted RBP37.22■■■■□ 3.55
SPHK2-213ENST00000601712 HMGXB3Q12766 1538 aa37.13■■■■□ 3.53
SPHK2-213ENST00000601712 WIZO95785 1651 aa37.13■■■■□ 3.53
SPHK2-213ENST00000601712 BAZ1BQ9UIG0 1483 aaKnown RBP37.07■■■■□ 3.53
SPHK2-213ENST00000601712 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
SPHK2-213ENST00000601712 SUPT5HO00267 1087 aaKnown RBP36.64■■■■□ 3.46
SPHK2-213ENST00000601712 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
SPHK2-213ENST00000601712 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
SPHK2-213ENST00000601712 CADPSQ9ULU8 1353 aa36.19■■■■□ 3.38
SPHK2-213ENST00000601712 NESP48681 1621 aa36.18■■■■□ 3.38
SPHK2-213ENST00000601712 CFTRP13569 1480 aa36.07■■■■□ 3.36
SPHK2-213ENST00000601712 PDS5BQ9NTI5 1447 aa35.96■■■■□ 3.35
SPHK2-213ENST00000601712 ERCC6Q03468 1493 aa35.92■■■■□ 3.34
SPHK2-213ENST00000601712 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
SPHK2-213ENST00000601712 KIF21AQ7Z4S6 1674 aa35.82■■■■□ 3.32
SPHK2-213ENST00000601712 FANCD2Q9BXW9 1451 aa35.77■■■■□ 3.32
SPHK2-213ENST00000601712 CEP164Q9UPV0 1460 aa35.7■■■■□ 3.31
SPHK2-213ENST00000601712 THOC2Q8NI27 1593 aaKnown RBP35.57■■■■□ 3.28
SPHK2-213ENST00000601712 MRC2Q9UBG0 1479 aa35.55■■■■□ 3.28
SPHK2-213ENST00000601712 WDR62O43379 1518 aa35.41■■■■□ 3.26
SPHK2-213ENST00000601712 CUX2O14529 1486 aa35.37■■■■□ 3.25
SPHK2-213ENST00000601712 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
SPHK2-213ENST00000601712 ABCC8Q09428 1581 aa35.33■■■■□ 3.25
SPHK2-213ENST00000601712 DNMBPQ6XZF7 1577 aa35.27■■■■□ 3.24
SPHK2-213ENST00000601712 TOPBP1Q92547 1522 aa35.25■■■■□ 3.23
SPHK2-213ENST00000601712 CUX1P39880 1505 aa35.14■■■■□ 3.22
SPHK2-213ENST00000601712 WRNQ14191 1432 aaPredicted RBP eCLIP35.11■■■■□ 3.21
SPHK2-213ENST00000601712 TOP2BQ02880 1626 aa35■■■■□ 3.19
SPHK2-213ENST00000601712 BIVM-ERCC5R4GMW8 1640 aa35■■■■□ 3.19
SPHK2-213ENST00000601712 SYNJ1O43426 1573 aa34.98■■■■□ 3.19
SPHK2-213ENST00000601712 POLA1P09884 1462 aaPredicted RBP34.97■■■■□ 3.19
SPHK2-213ENST00000601712 FGD5Q6ZNL6 1462 aa34.96■■■■□ 3.19
SPHK2-213ENST00000601712 IFT140Q96RY7 1462 aa34.93■■■■□ 3.18
SPHK2-213ENST00000601712 SOGA1O94964 1423 aa34.85■■■■□ 3.17
SPHK2-213ENST00000601712 TARBP1Q13395 1621 aaKnown RBP34.84■■■■□ 3.17
SPHK2-213ENST00000601712 RAD54L2Q9Y4B4 1467 aa34.8■■■■□ 3.16
SPHK2-213ENST00000601712 ZNF608Q9ULD9 1512 aaPredicted RBP34.69■■■■□ 3.14
SPHK2-213ENST00000601712 WDR97A6NE52 1622 aa34.67■■■■□ 3.14
SPHK2-213ENST00000601712 ABCA10Q8WWZ4 1543 aa34.65■■■■□ 3.14
SPHK2-213ENST00000601712 EIF4G3O43432 1585 aaKnown RBP34.62■■■■□ 3.13
SPHK2-213ENST00000601712 TRIM41Q8WV44 630 aa34.61■■■■□ 3.13
SPHK2-213ENST00000601712 TDRD9Q8NDG6 1382 aaKnown RBP34.57■■■■□ 3.13
SPHK2-213ENST00000601712 AQRO60306 1485 aaKnown RBP eCLIP34.56■■■■□ 3.12
SPHK2-213ENST00000601712 ABCA5Q8WWZ7 1642 aa34.48■■■■□ 3.11
SPHK2-213ENST00000601712 GAPVD1Q14C86 1478 aa34.47■■■■□ 3.11
SPHK2-213ENST00000601712 CHIC1Q5VXU3 224 aa34.45■■■■□ 3.11
SPHK2-213ENST00000601712 GRIN2BQ13224 1484 aa34.4■■■■□ 3.1
SPHK2-213ENST00000601712 PBRM1Q86U86 1689 aa34.4■■■■□ 3.1
SPHK2-213ENST00000601712 KIF27Q86VH2 1401 aa34.36■■■■□ 3.09
SPHK2-213ENST00000601712 SNAPC4Q5SXM2 1469 aa34.27■■■■□ 3.08
SPHK2-213ENST00000601712 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
SPHK2-213ENST00000601712 ERICH3Q5RHP9 1530 aa34.27■■■■□ 3.08
SPHK2-213ENST00000601712 SYNJ2O15056 1496 aa34.12■■■■□ 3.05
SPHK2-213ENST00000601712 RUSC2Q8N2Y8 1516 aa34.12■■■■□ 3.05
SPHK2-213ENST00000601712 IGF1RP08069 1367 aa34.12■■■■□ 3.05
SPHK2-213ENST00000601712 CHD1O14646 1710 aa34.12■■■■□ 3.05
SPHK2-213ENST00000601712 ADAMTS12P58397 1594 aa34.12■■■■□ 3.05
SPHK2-213ENST00000601712 FBLN2P98095 1184 aa34.09■■■■□ 3.05
SPHK2-213ENST00000601712 CHMP7Q8WUX9 453 aaPredicted RBP34.09■■■■□ 3.05
SPHK2-213ENST00000601712 FHAD1B1AJZ9 1412 aa34.08■■■■□ 3.05
SPHK2-213ENST00000601712 CUL7Q14999 1698 aa34.08■■■■□ 3.05
SPHK2-213ENST00000601712 EEA1Q15075 1411 aa34.02■■■■□ 3.04
SPHK2-213ENST00000601712 OSCARQ8IYS5 282 aa33.99■■■■□ 3.03
SPHK2-213ENST00000601712 GRIN2AQ12879 1464 aa33.95■■■■□ 3.03
SPHK2-213ENST00000601712 CARMIL1Q5VZK9 1371 aa33.95■■■■□ 3.02
SPHK2-213ENST00000601712 CSRNP3Q8WYN3 585 aa33.88■■■■□ 3.01
SPHK2-213ENST00000601712 FAM9AQ8IZU1 332 aaPredicted RBP33.85■■■■□ 3.01
SPHK2-213ENST00000601712 RAPGEF2Q9Y4G8 1499 aa33.81■■■■□ 3
SPHK2-213ENST00000601712 PRXQ9BXM0 1461 aa33.78■■■■□ 3
SPHK2-213ENST00000601712 NUP160Q12769 1436 aa33.77■■■■□ 3
SPHK2-213ENST00000601712 CEP170Q5SW79 1584 aa33.75■■■□□ 2.99
SPHK2-213ENST00000601712 CLASP1Q7Z460 1538 aa33.72■■■□□ 2.99
SPHK2-213ENST00000601712 DNAJC5Q9H3Z4 198 aa33.72■■■□□ 2.99
SPHK2-213ENST00000601712 KIF21BO75037 1637 aa33.63■■■□□ 2.97
SPHK2-213ENST00000601712 KIAA0586Q9BVV6 1533 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms