RNA–Protein interactions for RNA: ENST00000581216.5

TEFM-205, Transcript of transcription elongation factor, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TEFM, Length 1,891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-205ENST00000581216 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
TEFM-205ENST00000581216 CCDC180Q9P1Z9 1646 aa33.3■■■□□ 2.92
TEFM-205ENST00000581216 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
TEFM-205ENST00000581216 ABCC9O60706 1549 aa32.51■■■□□ 2.79
TEFM-205ENST00000581216 SHROOM4Q9ULL8 1493 aa32.26■■■□□ 2.75
TEFM-205ENST00000581216 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
TEFM-205ENST00000581216 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
TEFM-205ENST00000581216 SUPT5HO00267 1087 aaKnown RBP31.5■■■□□ 2.63
TEFM-205ENST00000581216 RB1CC1Q8TDY2 1594 aa31.27■■■□□ 2.6
TEFM-205ENST00000581216 NACADO15069 1562 aa31.26■■■□□ 2.59
TEFM-205ENST00000581216 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
TEFM-205ENST00000581216 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
TEFM-205ENST00000581216 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
TEFM-205ENST00000581216 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
TEFM-205ENST00000581216 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
TEFM-205ENST00000581216 BICRAQ9NZM4 1560 aa30.4■■■□□ 2.46
TEFM-205ENST00000581216 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
TEFM-205ENST00000581216 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
TEFM-205ENST00000581216 MROH2BQ7Z745 1585 aa29.92■■■□□ 2.38
TEFM-205ENST00000581216 DNAJC5BQ9UF47 199 aa29.77■■■□□ 2.36
TEFM-205ENST00000581216 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
TEFM-205ENST00000581216 WIZO95785 1651 aa29.75■■■□□ 2.35
TEFM-205ENST00000581216 LOC105371045A0A1W2PR82 267 aa29.55■■■□□ 2.32
TEFM-205ENST00000581216 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
TEFM-205ENST00000581216 SMARCA4P51532 1647 aa29.52■■■□□ 2.32
TEFM-205ENST00000581216 TRIM41Q8WV44 630 aa29.52■■■□□ 2.32
TEFM-205ENST00000581216 TOP2AP11388 1531 aaKnown RBP29.43■■■□□ 2.3
TEFM-205ENST00000581216 CC2D2AQ9P2K1 1620 aa29.41■■■□□ 2.3
TEFM-205ENST00000581216 PCGF6Q9BYE7 350 aa29.21■■■□□ 2.27
TEFM-205ENST00000581216 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
TEFM-205ENST00000581216 HRCP23327 699 aa29.17■■■□□ 2.26
TEFM-205ENST00000581216 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
TEFM-205ENST00000581216 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
TEFM-205ENST00000581216 FAM9AQ8IZU1 332 aaPredicted RBP29.04■■■□□ 2.24
TEFM-205ENST00000581216 TRIM26Q12899 539 aaPredicted RBP28.96■■■□□ 2.23
TEFM-205ENST00000581216 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
TEFM-205ENST00000581216 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
TEFM-205ENST00000581216 NCAPD3P42695 1498 aa28.86■■■□□ 2.21
TEFM-205ENST00000581216 HMGXB3Q12766 1538 aa28.72■■■□□ 2.19
TEFM-205ENST00000581216 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
TEFM-205ENST00000581216 EEA1Q15075 1411 aa28.63■■■□□ 2.17
TEFM-205ENST00000581216 EHMT2Q96KQ7 1210 aa28.61■■■□□ 2.17
TEFM-205ENST00000581216 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
TEFM-205ENST00000581216 SOGA1O94964 1423 aa28.52■■■□□ 2.16
TEFM-205ENST00000581216 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
TEFM-205ENST00000581216 TNIKQ9UKE5 1360 aa28.4■■■□□ 2.14
TEFM-205ENST00000581216 CSRNP3Q8WYN3 585 aa28.4■■■□□ 2.14
TEFM-205ENST00000581216 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
TEFM-205ENST00000581216 PPARGC1BQ86YN6 1023 aaKnown RBP28.35■■■□□ 2.13
TEFM-205ENST00000581216 CEP162Q5TB80 1403 aa28.33■■■□□ 2.13
TEFM-205ENST00000581216 ZEB1P37275 1124 aaPredicted RBP28.3■■■□□ 2.12
TEFM-205ENST00000581216 GOLGA3Q08378 1498 aa28.3■■■□□ 2.12
TEFM-205ENST00000581216 KIF21BO75037 1637 aa28.23■■■□□ 2.11
TEFM-205ENST00000581216 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
TEFM-205ENST00000581216 NESP48681 1621 aa28.2■■■□□ 2.11
TEFM-205ENST00000581216 CEP164Q9UPV0 1460 aa28.19■■■□□ 2.1
TEFM-205ENST00000581216 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
TEFM-205ENST00000581216 UBTFP17480 764 aaKnown RBP28.12■■■□□ 2.09
TEFM-205ENST00000581216 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
TEFM-205ENST00000581216 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
TEFM-205ENST00000581216 CFTRP13569 1480 aa28■■■□□ 2.07
TEFM-205ENST00000581216 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
TEFM-205ENST00000581216 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
TEFM-205ENST00000581216 CUX1P39880 1505 aa27.91■■■□□ 2.06
TEFM-205ENST00000581216 RAPGEF2Q9Y4G8 1499 aa27.9■■■□□ 2.06
TEFM-205ENST00000581216 CLIP1P30622 1438 aa27.88■■■□□ 2.05
TEFM-205ENST00000581216 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
TEFM-205ENST00000581216 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
TEFM-205ENST00000581216 ERICH3Q5RHP9 1530 aa27.86■■■□□ 2.05
TEFM-205ENST00000581216 PRXQ9BXM0 1461 aa27.8■■■□□ 2.04
TEFM-205ENST00000581216 VPS8Q8N3P4 1428 aa27.77■■■□□ 2.04
TEFM-205ENST00000581216 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
TEFM-205ENST00000581216 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
TEFM-205ENST00000581216 THOC2Q8NI27 1593 aaKnown RBP27.71■■■□□ 2.03
TEFM-205ENST00000581216 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
TEFM-205ENST00000581216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
TEFM-205ENST00000581216 CCER1Q8TC90 406 aaPredicted RBP27.65■■■□□ 2.02
TEFM-205ENST00000581216 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
TEFM-205ENST00000581216 CUX2O14529 1486 aa27.58■■■□□ 2.01
TEFM-205ENST00000581216 APLP2Q06481 763 aa27.51■■□□□ 1.99
TEFM-205ENST00000581216 WDR62O43379 1518 aa27.51■■□□□ 1.99
TEFM-205ENST00000581216 ARAP1Q96P48 1450 aa27.5■■□□□ 1.99
TEFM-205ENST00000581216 URB2Q14146 1524 aaKnown RBP27.47■■□□□ 1.99
TEFM-205ENST00000581216 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
TEFM-205ENST00000581216 RANGAP1P46060 587 aaPredicted RBP27.4■■□□□ 1.98
TEFM-205ENST00000581216 IGF1RP08069 1367 aa27.39■■□□□ 1.98
TEFM-205ENST00000581216 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
TEFM-205ENST00000581216 ARHGAP35Q9NRY4 1499 aa27.31■■□□□ 1.96
TEFM-205ENST00000581216 TOPBP1Q92547 1522 aa27.31■■□□□ 1.96
TEFM-205ENST00000581216 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
TEFM-205ENST00000581216 HNRNPUL2Q1KMD3 747 aaKnown RBP27.23■■□□□ 1.95
TEFM-205ENST00000581216 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
TEFM-205ENST00000581216 POLA1P09884 1462 aaPredicted RBP27.17■■□□□ 1.94
TEFM-205ENST00000581216 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
TEFM-205ENST00000581216 MAP3K1Q13233 1512 aa27.12■■□□□ 1.93
TEFM-205ENST00000581216 RRBP1Q9P2E9 1410 aaKnown RBP27.11■■□□□ 1.93
TEFM-205ENST00000581216 RAD54L2Q9Y4B4 1467 aa27.11■■□□□ 1.93
TEFM-205ENST00000581216 CUL7Q14999 1698 aa27.1■■□□□ 1.93
TEFM-205ENST00000581216 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
TEFM-205ENST00000581216 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms