RNA–Protein interactions for RNA: ENST00000376292.8

KLHL35-201, Transcript of kelch like family member 35, humanhuman

TSL 1 (best) BASIC

Gene KLHL35, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL35-201ENST00000376292 NISCHQ9Y2I1 1504 aa48.45■■■■■ 5.35
KLHL35-201ENST00000376292 CCDC180Q9P1Z9 1646 aa42.82■■■■■ 4.45
KLHL35-201ENST00000376292 ABCC9O60706 1549 aa41.71■■■■■ 4.27
KLHL35-201ENST00000376292 ZCCHC6Q5VYS8 1495 aaKnown RBP40.5■■■■■ 4.07
KLHL35-201ENST00000376292 DCAF8L2P0C7V8 631 aa40.23■■■■■ 4.03
KLHL35-201ENST00000376292 NACADO15069 1562 aa40.13■■■■■ 4.01
KLHL35-201ENST00000376292 RB1CC1Q8TDY2 1594 aa40.12■■■■■ 4.01
KLHL35-201ENST00000376292 DCAF1Q9Y4B6 1507 aa40.1■■■■■ 4.01
KLHL35-201ENST00000376292 MYO15BQ96JP2 1530 aa40.07■■■■■ 4
KLHL35-201ENST00000376292 UNC13AQ9UPW8 1703 aa39.22■■■■□ 3.87
KLHL35-201ENST00000376292 SCRIBQ14160 1630 aa39.16■■■■□ 3.86
KLHL35-201ENST00000376292 PABPN1Q86U42 306 aaKnown RBP eCLIP39.01■■■■□ 3.84
KLHL35-201ENST00000376292 BICRAQ9NZM4 1560 aa38.89■■■■□ 3.82
KLHL35-201ENST00000376292 SHROOM4Q9ULL8 1493 aa38.63■■■■□ 3.77
KLHL35-201ENST00000376292 DNAJC5BQ9UF47 199 aa38.17■■■■□ 3.7
KLHL35-201ENST00000376292 EIF4G1Q04637 1599 aaKnown RBP37.87■■■■□ 3.65
KLHL35-201ENST00000376292 CC2D2AQ9P2K1 1620 aa37.71■■■■□ 3.63
KLHL35-201ENST00000376292 CECR2Q9BXF3 1484 aa37.7■■■■□ 3.63
KLHL35-201ENST00000376292 BAZ1AQ9NRL2 1556 aaPredicted RBP37.52■■■■□ 3.6
KLHL35-201ENST00000376292 SMARCA4P51532 1647 aa37.49■■■■□ 3.59
KLHL35-201ENST00000376292 MROH2BQ7Z745 1585 aa37.37■■■■□ 3.57
KLHL35-201ENST00000376292 ATAD2BQ9ULI0 1458 aa37.14■■■■□ 3.54
KLHL35-201ENST00000376292 RSF1Q96T23 1441 aaPredicted RBP37.13■■■■□ 3.53
KLHL35-201ENST00000376292 SMARCA2P51531 1590 aa37.12■■■■□ 3.53
KLHL35-201ENST00000376292 PEG3Q9GZU2 1588 aa37.1■■■■□ 3.53
KLHL35-201ENST00000376292 NCAPD3P42695 1498 aa37.02■■■■□ 3.52
KLHL35-201ENST00000376292 WIZO95785 1651 aa36.98■■■■□ 3.51
KLHL35-201ENST00000376292 HMGXB3Q12766 1538 aa36.91■■■■□ 3.5
KLHL35-201ENST00000376292 BAZ1BQ9UIG0 1483 aaKnown RBP36.87■■■■□ 3.49
KLHL35-201ENST00000376292 TOP2AP11388 1531 aaKnown RBP36.63■■■■□ 3.45
KLHL35-201ENST00000376292 SUPT5HO00267 1087 aaKnown RBP36.58■■■■□ 3.45
KLHL35-201ENST00000376292 CCDC88BA6NC98 1476 aa36.18■■■■□ 3.38
KLHL35-201ENST00000376292 NESP48681 1621 aa36.11■■■■□ 3.37
KLHL35-201ENST00000376292 LAMC3Q9Y6N6 1575 aa36.01■■■■□ 3.35
KLHL35-201ENST00000376292 CADPSQ9ULU8 1353 aa35.97■■■■□ 3.35
KLHL35-201ENST00000376292 ERCC6Q03468 1493 aa35.96■■■■□ 3.35
KLHL35-201ENST00000376292 CFTRP13569 1480 aa35.89■■■■□ 3.34
KLHL35-201ENST00000376292 PDS5BQ9NTI5 1447 aa35.78■■■■□ 3.32
KLHL35-201ENST00000376292 KIF21AQ7Z4S6 1674 aa35.68■■■■□ 3.3
KLHL35-201ENST00000376292 PRDM2Q13029 1718 aa35.64■■■■□ 3.3
KLHL35-201ENST00000376292 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
KLHL35-201ENST00000376292 THOC2Q8NI27 1593 aaKnown RBP35.51■■■■□ 3.28
KLHL35-201ENST00000376292 CEP164Q9UPV0 1460 aa35.49■■■■□ 3.27
KLHL35-201ENST00000376292 CUX2O14529 1486 aa35.48■■■■□ 3.27
KLHL35-201ENST00000376292 MRC2Q9UBG0 1479 aa35.4■■■■□ 3.26
KLHL35-201ENST00000376292 WDR62O43379 1518 aa35.26■■■■□ 3.24
KLHL35-201ENST00000376292 URB2Q14146 1524 aaKnown RBP35.19■■■■□ 3.22
KLHL35-201ENST00000376292 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
KLHL35-201ENST00000376292 TOPBP1Q92547 1522 aa35.08■■■■□ 3.21
KLHL35-201ENST00000376292 ABCC8Q09428 1581 aa35.07■■■■□ 3.2
KLHL35-201ENST00000376292 CUX1P39880 1505 aa35.02■■■■□ 3.2
KLHL35-201ENST00000376292 WRNQ14191 1432 aaPredicted RBP eCLIP34.99■■■■□ 3.19
KLHL35-201ENST00000376292 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
KLHL35-201ENST00000376292 TOP2BQ02880 1626 aa34.85■■■■□ 3.17
KLHL35-201ENST00000376292 BIVM-ERCC5R4GMW8 1640 aa34.85■■■■□ 3.17
KLHL35-201ENST00000376292 POLA1P09884 1462 aaPredicted RBP34.83■■■■□ 3.17
KLHL35-201ENST00000376292 FGD5Q6ZNL6 1462 aa34.81■■■■□ 3.16
KLHL35-201ENST00000376292 IFT140Q96RY7 1462 aa34.73■■■■□ 3.15
KLHL35-201ENST00000376292 RAD54L2Q9Y4B4 1467 aa34.66■■■■□ 3.14
KLHL35-201ENST00000376292 SOGA1O94964 1423 aa34.66■■■■□ 3.14
KLHL35-201ENST00000376292 TARBP1Q13395 1621 aaKnown RBP34.64■■■■□ 3.14
KLHL35-201ENST00000376292 ZNF608Q9ULD9 1512 aaPredicted RBP34.57■■■■□ 3.13
KLHL35-201ENST00000376292 TRIM41Q8WV44 630 aa34.51■■■■□ 3.12
KLHL35-201ENST00000376292 WDR97A6NE52 1622 aa34.51■■■■□ 3.11
KLHL35-201ENST00000376292 ABCA10Q8WWZ4 1543 aa34.5■■■■□ 3.11
KLHL35-201ENST00000376292 CHIC1Q5VXU3 224 aa34.44■■■■□ 3.1
KLHL35-201ENST00000376292 EIF4G3O43432 1585 aaKnown RBP34.44■■■■□ 3.1
KLHL35-201ENST00000376292 AQRO60306 1485 aaKnown RBP eCLIP34.41■■■■□ 3.1
KLHL35-201ENST00000376292 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
KLHL35-201ENST00000376292 ABCA5Q8WWZ7 1642 aa34.33■■■■□ 3.09
KLHL35-201ENST00000376292 DNAJC5Q9H3Z4 198 aa34.29■■■■□ 3.08
KLHL35-201ENST00000376292 GAPVD1Q14C86 1478 aa34.28■■■■□ 3.08
KLHL35-201ENST00000376292 KIF27Q86VH2 1401 aa34.21■■■■□ 3.07
KLHL35-201ENST00000376292 GRIN2BQ13224 1484 aa34.21■■■■□ 3.07
KLHL35-201ENST00000376292 PBRM1Q86U86 1689 aa34.18■■■■□ 3.06
KLHL35-201ENST00000376292 SNAPC4Q5SXM2 1469 aa34.1■■■■□ 3.05
KLHL35-201ENST00000376292 ERICH3Q5RHP9 1530 aa34.09■■■■□ 3.05
KLHL35-201ENST00000376292 RUSC2Q8N2Y8 1516 aa34.08■■■■□ 3.05
KLHL35-201ENST00000376292 OSCARQ8IYS5 282 aa34.07■■■■□ 3.04
KLHL35-201ENST00000376292 MAGI1Q96QZ7 1491 aaPredicted RBP34.06■■■■□ 3.04
KLHL35-201ENST00000376292 FBLN2P98095 1184 aa34.04■■■■□ 3.04
KLHL35-201ENST00000376292 CHD1O14646 1710 aa33.99■■■■□ 3.03
KLHL35-201ENST00000376292 IGF1RP08069 1367 aa33.99■■■■□ 3.03
KLHL35-201ENST00000376292 ADAMTS12P58397 1594 aa33.96■■■■□ 3.03
KLHL35-201ENST00000376292 CHMP7Q8WUX9 453 aaPredicted RBP33.93■■■■□ 3.02
KLHL35-201ENST00000376292 SYNJ2O15056 1496 aa33.92■■■■□ 3.02
KLHL35-201ENST00000376292 EEA1Q15075 1411 aa33.91■■■■□ 3.02
KLHL35-201ENST00000376292 FHAD1B1AJZ9 1412 aa33.9■■■■□ 3.02
KLHL35-201ENST00000376292 CUL7Q14999 1698 aa33.89■■■■□ 3.02
KLHL35-201ENST00000376292 FAM9AQ8IZU1 332 aaPredicted RBP33.8■■■■□ 3
KLHL35-201ENST00000376292 CARMIL1Q5VZK9 1371 aa33.8■■■■□ 3
KLHL35-201ENST00000376292 GRIN2AQ12879 1464 aa33.78■■■■□ 3
KLHL35-201ENST00000376292 CSRNP3Q8WYN3 585 aa33.76■■■■□ 3
KLHL35-201ENST00000376292 PRXQ9BXM0 1461 aa33.7■■■□□ 2.99
KLHL35-201ENST00000376292 RAPGEF2Q9Y4G8 1499 aa33.67■■■□□ 2.98
KLHL35-201ENST00000376292 NUP160Q12769 1436 aa33.6■■■□□ 2.97
KLHL35-201ENST00000376292 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
KLHL35-201ENST00000376292 CLASP1Q7Z460 1538 aa33.59■■■□□ 2.97
KLHL35-201ENST00000376292 KIF21BO75037 1637 aa33.53■■■□□ 2.96
KLHL35-201ENST00000376292 ARHGEF11O15085 1522 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms