Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SIGMAR1Q99720 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC12.95□□□□□ -0.34
SIGMAR1Q99720 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIGMAR1Q99720 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.95□□□□□ -0.34
SIGMAR1Q99720 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SIGMAR1Q99720 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 SSSCA1-AS1-201ENST00000567594 614 ntBASIC12.94□□□□□ -0.34
SIGMAR1Q99720 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 LINC00896-202ENST00000609602 2128 ntBASIC12.94□□□□□ -0.34
SIGMAR1Q99720 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIGMAR1Q99720 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 EI24-204ENST00000527235 1625 ntTSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 SRP68-213ENST00000629930 165 ntTSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 AC012317.2-201ENST00000623305 2251 ntBASIC12.93□□□□□ -0.34
SIGMAR1Q99720 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 C17orf82-201ENST00000623772 1530 ntBASIC12.93□□□□□ -0.34
SIGMAR1Q99720 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIGMAR1Q99720 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 NKILA-202ENST00000614771 2598 ntBASIC12.92□□□□□ -0.34
SIGMAR1Q99720 STK25-205ENST00000405883 1904 ntTSL 2 BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.92□□□□□ -0.34
SIGMAR1Q99720 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms