RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 NISCHQ9Y2I1 1504 aa51.03■■■■■ 5.76
RBM42-203ENST00000588161 CCDC180Q9P1Z9 1646 aa44.72■■■■■ 4.75
RBM42-203ENST00000588161 ZCCHC6Q5VYS8 1495 aaKnown RBP42.78■■■■■ 4.44
RBM42-203ENST00000588161 ABCC9O60706 1549 aa42.55■■■■■ 4.4
RBM42-203ENST00000588161 DCAF1Q9Y4B6 1507 aa42.27■■■■■ 4.36
RBM42-203ENST00000588161 DCAF8L2P0C7V8 631 aa42.17■■■■■ 4.34
RBM42-203ENST00000588161 MYO15BQ96JP2 1530 aa41.96■■■■■ 4.31
RBM42-203ENST00000588161 NACADO15069 1562 aa41.76■■■■■ 4.28
RBM42-203ENST00000588161 RB1CC1Q8TDY2 1594 aa41.48■■■■■ 4.23
RBM42-203ENST00000588161 SHROOM4Q9ULL8 1493 aa41.18■■■■■ 4.18
RBM42-203ENST00000588161 SCRIBQ14160 1630 aa40.95■■■■■ 4.15
RBM42-203ENST00000588161 UNC13AQ9UPW8 1703 aa40.52■■■■■ 4.08
RBM42-203ENST00000588161 BICRAQ9NZM4 1560 aa40.18■■■■■ 4.02
RBM42-203ENST00000588161 PABPN1Q86U42 306 aaKnown RBP eCLIP40.03■■■■■ 4
RBM42-203ENST00000588161 CECR2Q9BXF3 1484 aa39.62■■■■□ 3.93
RBM42-203ENST00000588161 SUPT5HO00267 1087 aaKnown RBP39.46■■■■□ 3.91
RBM42-203ENST00000588161 BAZ1AQ9NRL2 1556 aaPredicted RBP39.45■■■■□ 3.91
RBM42-203ENST00000588161 RSF1Q96T23 1441 aaPredicted RBP39.4■■■■□ 3.9
RBM42-203ENST00000588161 MROH2BQ7Z745 1585 aa39.35■■■■□ 3.89
RBM42-203ENST00000588161 SMARCA4P51532 1647 aa39.29■■■■□ 3.88
RBM42-203ENST00000588161 EIF4G1Q04637 1599 aaKnown RBP39.02■■■■□ 3.84
RBM42-203ENST00000588161 WIZO95785 1651 aa38.99■■■■□ 3.83
RBM42-203ENST00000588161 PEG3Q9GZU2 1588 aa38.89■■■■□ 3.82
RBM42-203ENST00000588161 ATAD2BQ9ULI0 1458 aa38.77■■■■□ 3.8
RBM42-203ENST00000588161 SMARCA2P51531 1590 aa38.76■■■■□ 3.8
RBM42-203ENST00000588161 TOP2AP11388 1531 aaKnown RBP38.65■■■■□ 3.78
RBM42-203ENST00000588161 NCAPD3P42695 1498 aa38.55■■■■□ 3.76
RBM42-203ENST00000588161 CC2D2AQ9P2K1 1620 aa38.53■■■■□ 3.76
RBM42-203ENST00000588161 BAZ1BQ9UIG0 1483 aaKnown RBP38.52■■■■□ 3.76
RBM42-203ENST00000588161 HMGXB3Q12766 1538 aa38.45■■■■□ 3.75
RBM42-203ENST00000588161 CCDC88BA6NC98 1476 aa38.22■■■■□ 3.71
RBM42-203ENST00000588161 DNAJC5BQ9UF47 199 aa37.89■■■■□ 3.66
RBM42-203ENST00000588161 CHIC1Q5VXU3 224 aa37.61■■■■□ 3.61
RBM42-203ENST00000588161 CFTRP13569 1480 aa37.55■■■■□ 3.6
RBM42-203ENST00000588161 CADPSQ9ULU8 1353 aa37.51■■■■□ 3.6
RBM42-203ENST00000588161 PRDM2Q13029 1718 aa37.3■■■■□ 3.56
RBM42-203ENST00000588161 LAMC3Q9Y6N6 1575 aa37.29■■■■□ 3.56
RBM42-203ENST00000588161 NESP48681 1621 aa37.21■■■■□ 3.55
RBM42-203ENST00000588161 ABCC8Q09428 1581 aa37.21■■■■□ 3.55
RBM42-203ENST00000588161 TRIM41Q8WV44 630 aa37.21■■■■□ 3.55
RBM42-203ENST00000588161 WRNQ14191 1432 aaPredicted RBP eCLIP37.12■■■■□ 3.53
RBM42-203ENST00000588161 FANCD2Q9BXW9 1451 aa37.07■■■■□ 3.52
RBM42-203ENST00000588161 PDS5BQ9NTI5 1447 aa37.02■■■■□ 3.52
RBM42-203ENST00000588161 SYNJ1O43426 1573 aa36.92■■■■□ 3.5
RBM42-203ENST00000588161 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.49
RBM42-203ENST00000588161 TOP2BQ02880 1626 aa36.86■■■■□ 3.49
RBM42-203ENST00000588161 CUX1P39880 1505 aa36.83■■■■□ 3.49
RBM42-203ENST00000588161 BIVM-ERCC5R4GMW8 1640 aa36.83■■■■□ 3.49
RBM42-203ENST00000588161 KIF21AQ7Z4S6 1674 aa36.77■■■■□ 3.48
RBM42-203ENST00000588161 DNMBPQ6XZF7 1577 aa36.67■■■■□ 3.46
RBM42-203ENST00000588161 TOPBP1Q92547 1522 aa36.62■■■■□ 3.45
RBM42-203ENST00000588161 URB2Q14146 1524 aaKnown RBP36.6■■■■□ 3.45
RBM42-203ENST00000588161 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
RBM42-203ENST00000588161 MRC2Q9UBG0 1479 aa36.54■■■■□ 3.44
RBM42-203ENST00000588161 FGD5Q6ZNL6 1462 aa36.51■■■■□ 3.44
RBM42-203ENST00000588161 SOGA1O94964 1423 aa36.46■■■■□ 3.43
RBM42-203ENST00000588161 EEA1Q15075 1411 aa36.44■■■■□ 3.42
RBM42-203ENST00000588161 FAM9AQ8IZU1 332 aaPredicted RBP36.41■■■■□ 3.42
RBM42-203ENST00000588161 POLA1P09884 1462 aaPredicted RBP36.4■■■■□ 3.42
RBM42-203ENST00000588161 WDR62O43379 1518 aa36.37■■■■□ 3.41
RBM42-203ENST00000588161 RUSC2Q8N2Y8 1516 aa36.33■■■■□ 3.41
RBM42-203ENST00000588161 THOC2Q8NI27 1593 aaKnown RBP36.32■■■■□ 3.4
RBM42-203ENST00000588161 KIF27Q86VH2 1401 aa36.24■■■■□ 3.39
RBM42-203ENST00000588161 RAD54L2Q9Y4B4 1467 aa36.24■■■■□ 3.39
RBM42-203ENST00000588161 CSRNP3Q8WYN3 585 aa36.23■■■■□ 3.39
RBM42-203ENST00000588161 ABCA10Q8WWZ4 1543 aa36.22■■■■□ 3.39
RBM42-203ENST00000588161 CUX2O14529 1486 aa36.19■■■■□ 3.38
RBM42-203ENST00000588161 TARBP1Q13395 1621 aaKnown RBP36.09■■■■□ 3.37
RBM42-203ENST00000588161 LOC105371045A0A1W2PR82 267 aa36.09■■■■□ 3.37
RBM42-203ENST00000588161 WDR97A6NE52 1622 aa36.09■■■■□ 3.37
RBM42-203ENST00000588161 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
RBM42-203ENST00000588161 IGF1RP08069 1367 aa35.95■■■■□ 3.35
RBM42-203ENST00000588161 TDRD9Q8NDG6 1382 aaKnown RBP35.94■■■■□ 3.34
RBM42-203ENST00000588161 ABCA5Q8WWZ7 1642 aa35.93■■■■□ 3.34
RBM42-203ENST00000588161 KIF21BO75037 1637 aa35.92■■■■□ 3.34
RBM42-203ENST00000588161 GAPVD1Q14C86 1478 aa35.89■■■■□ 3.34
RBM42-203ENST00000588161 PRXQ9BXM0 1461 aa35.89■■■■□ 3.34
RBM42-203ENST00000588161 GOLGA3Q08378 1498 aa35.85■■■■□ 3.33
RBM42-203ENST00000588161 EHMT2Q96KQ7 1210 aa35.83■■■■□ 3.33
RBM42-203ENST00000588161 ERICH3Q5RHP9 1530 aa35.8■■■■□ 3.32
RBM42-203ENST00000588161 ZNF608Q9ULD9 1512 aaPredicted RBP35.78■■■■□ 3.32
RBM42-203ENST00000588161 AQRO60306 1485 aaKnown RBP eCLIP35.78■■■■□ 3.322e-6■■■□□ 18.2
RBM42-203ENST00000588161 CARMIL1Q5VZK9 1371 aa35.76■■■■□ 3.32
RBM42-203ENST00000588161 RAPGEF2Q9Y4G8 1499 aa35.76■■■■□ 3.31
RBM42-203ENST00000588161 CUL7Q14999 1698 aa35.72■■■■□ 3.31
RBM42-203ENST00000588161 GRIN2BQ13224 1484 aa35.69■■■■□ 3.3
RBM42-203ENST00000588161 TNIKQ9UKE5 1360 aa35.68■■■■□ 3.3
RBM42-203ENST00000588161 EIF4G3O43432 1585 aaKnown RBP35.68■■■■□ 3.3
RBM42-203ENST00000588161 UBTFP17480 764 aaKnown RBP35.68■■■■□ 3.3
RBM42-203ENST00000588161 PBRM1Q86U86 1689 aa35.67■■■■□ 3.3
RBM42-203ENST00000588161 FHAD1B1AJZ9 1412 aa35.52■■■■□ 3.28
RBM42-203ENST00000588161 ADAMTS12P58397 1594 aa35.49■■■■□ 3.27
RBM42-203ENST00000588161 SNAPC4Q5SXM2 1469 aa35.46■■■■□ 3.27
RBM42-203ENST00000588161 MAGI1Q96QZ7 1491 aaPredicted RBP35.45■■■■□ 3.27
RBM42-203ENST00000588161 CEP162Q5TB80 1403 aa35.4■■■■□ 3.26
RBM42-203ENST00000588161 SYNJ2O15056 1496 aa35.3■■■■□ 3.24
RBM42-203ENST00000588161 CLIP1P30622 1438 aa35.25■■■■□ 3.23
RBM42-203ENST00000588161 GRIN2AQ12879 1464 aa35.23■■■■□ 3.23
RBM42-203ENST00000588161 CHMP7Q8WUX9 453 aaPredicted RBP35.22■■■■□ 3.23
RBM42-203ENST00000588161 CTTNBP2Q8WZ74 1663 aa35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms