RNA–Protein interactions for RNA: ENST00000617858.4

PGR-209, Transcript of progesterone receptor, humanhuman

TSL 5 BASIC

Gene PGR, Length 2,816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGR-209ENST00000617858 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
PGR-209ENST00000617858 CCDC180Q9P1Z9 1646 aa30.7■■■□□ 2.51
PGR-209ENST00000617858 DCAF8L2P0C7V8 631 aa30.08■■■□□ 2.41
PGR-209ENST00000617858 ZCCHC6Q5VYS8 1495 aaKnown RBP30.06■■■□□ 2.4
PGR-209ENST00000617858 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
PGR-209ENST00000617858 ABCC9O60706 1549 aa29.31■■■□□ 2.28
PGR-209ENST00000617858 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PGR-209ENST00000617858 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
PGR-209ENST00000617858 SCRIBQ14160 1630 aa28.77■■■□□ 2.2
PGR-209ENST00000617858 MYO15BQ96JP2 1530 aa28.7■■■□□ 2.18
PGR-209ENST00000617858 NACADO15069 1562 aa28.61■■■□□ 2.17
PGR-209ENST00000617858 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
PGR-209ENST00000617858 RSF1Q96T23 1441 aaPredicted RBP27.99■■■□□ 2.07
PGR-209ENST00000617858 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
PGR-209ENST00000617858 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.06
PGR-209ENST00000617858 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
PGR-209ENST00000617858 MROH2BQ7Z745 1585 aa27.78■■■□□ 2.04
PGR-209ENST00000617858 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
PGR-209ENST00000617858 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
PGR-209ENST00000617858 WIZO95785 1651 aa27.58■■■□□ 2.01
PGR-209ENST00000617858 HRCP23327 699 aa27.55■■■□□ 2
PGR-209ENST00000617858 BAZ1AQ9NRL2 1556 aaPredicted RBP27.51■■□□□ 1.99
PGR-209ENST00000617858 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
PGR-209ENST00000617858 PCGF6Q9BYE7 350 aa27.12■■□□□ 1.93
PGR-209ENST00000617858 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
PGR-209ENST00000617858 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
PGR-209ENST00000617858 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
PGR-209ENST00000617858 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
PGR-209ENST00000617858 LOC105371045A0A1W2PR82 267 aa26.98■■□□□ 1.91
PGR-209ENST00000617858 SMARCA2P51531 1590 aa26.94■■□□□ 1.9
PGR-209ENST00000617858 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
PGR-209ENST00000617858 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
PGR-209ENST00000617858 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
PGR-209ENST00000617858 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
PGR-209ENST00000617858 EHMT2Q96KQ7 1210 aa26.79■■□□□ 1.88
PGR-209ENST00000617858 EIF4G1Q04637 1599 aaKnown RBP26.76■■□□□ 1.87
PGR-209ENST00000617858 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
PGR-209ENST00000617858 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
PGR-209ENST00000617858 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
PGR-209ENST00000617858 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
PGR-209ENST00000617858 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
PGR-209ENST00000617858 SOGA1O94964 1423 aa26.3■■□□□ 1.8
PGR-209ENST00000617858 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
PGR-209ENST00000617858 PELP1Q8IZL8 1130 aaKnown RBP26.23■■□□□ 1.79
PGR-209ENST00000617858 SYNJ1O43426 1573 aa26.22■■□□□ 1.79
PGR-209ENST00000617858 RUSC2Q8N2Y8 1516 aa26.22■■□□□ 1.79
PGR-209ENST00000617858 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
PGR-209ENST00000617858 CFTRP13569 1480 aa26.06■■□□□ 1.76
PGR-209ENST00000617858 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
PGR-209ENST00000617858 ZEB1P37275 1124 aaPredicted RBP25.97■■□□□ 1.75
PGR-209ENST00000617858 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
PGR-209ENST00000617858 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
PGR-209ENST00000617858 UBTFP17480 764 aaKnown RBP25.96■■□□□ 1.75
PGR-209ENST00000617858 EEA1Q15075 1411 aa25.93■■□□□ 1.74
PGR-209ENST00000617858 TOP2BQ02880 1626 aa25.93■■□□□ 1.74
PGR-209ENST00000617858 CUX1P39880 1505 aa25.9■■□□□ 1.74
PGR-209ENST00000617858 NESP48681 1621 aa25.85■■□□□ 1.73
PGR-209ENST00000617858 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
PGR-209ENST00000617858 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
PGR-209ENST00000617858 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
PGR-209ENST00000617858 CEP162Q5TB80 1403 aa25.76■■□□□ 1.71
PGR-209ENST00000617858 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
PGR-209ENST00000617858 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
PGR-209ENST00000617858 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
PGR-209ENST00000617858 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.7
PGR-209ENST00000617858 TTBK1Q5TCY1 1321 aaPredicted RBP25.69■■□□□ 1.7
PGR-209ENST00000617858 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
PGR-209ENST00000617858 KIF21BO75037 1637 aa25.6■■□□□ 1.69
PGR-209ENST00000617858 KIF27Q86VH2 1401 aa25.6■■□□□ 1.69
PGR-209ENST00000617858 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
PGR-209ENST00000617858 CUX2O14529 1486 aa25.56■■□□□ 1.68
PGR-209ENST00000617858 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
PGR-209ENST00000617858 CLIP1P30622 1438 aa25.48■■□□□ 1.67
PGR-209ENST00000617858 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
PGR-209ENST00000617858 PRXQ9BXM0 1461 aa25.47■■□□□ 1.67
PGR-209ENST00000617858 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
PGR-209ENST00000617858 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
PGR-209ENST00000617858 PDS5BQ9NTI5 1447 aa25.4■■□□□ 1.66
PGR-209ENST00000617858 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
PGR-209ENST00000617858 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
PGR-209ENST00000617858 IGF1RP08069 1367 aa25.39■■□□□ 1.66
PGR-209ENST00000617858 ACIN1Q9UKV3 1341 aaKnown RBP25.38■■□□□ 1.65
PGR-209ENST00000617858 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
PGR-209ENST00000617858 NEUROD1Q13562 356 aa25.34■■□□□ 1.65
PGR-209ENST00000617858 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
PGR-209ENST00000617858 CARMIL1Q5VZK9 1371 aa25.29■■□□□ 1.64
PGR-209ENST00000617858 TDRD9Q8NDG6 1382 aaKnown RBP25.25■■□□□ 1.63
PGR-209ENST00000617858 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
PGR-209ENST00000617858 VPS8Q8N3P4 1428 aa25.22■■□□□ 1.63
PGR-209ENST00000617858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.21■■□□□ 1.63
PGR-209ENST00000617858 GTF3C3Q9Y5Q9 886 aa25.18■■□□□ 1.62
PGR-209ENST00000617858 APLP2Q06481 763 aa25.17■■□□□ 1.62
PGR-209ENST00000617858 CCER1Q8TC90 406 aaPredicted RBP25.16■■□□□ 1.62
PGR-209ENST00000617858 ARAP1Q96P48 1450 aa25.13■■□□□ 1.61
PGR-209ENST00000617858 MYT1Q01538 1121 aa25.12■■□□□ 1.61
PGR-209ENST00000617858 CENPBP07199 599 aaPredicted RBP25.09■■□□□ 1.61
PGR-209ENST00000617858 P3H3Q8IVL6 736 aa25.09■■□□□ 1.61
PGR-209ENST00000617858 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.6
PGR-209ENST00000617858 ARHGAP35Q9NRY4 1499 aa25.07■■□□□ 1.6
PGR-209ENST00000617858 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms