RNA–Protein interactions for RNA: ENST00000395525.7

SPECC1-203, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-203ENST00000395525 NISCHQ9Y2I1 1504 aa35.52■■■■□ 3.28
SPECC1-203ENST00000395525 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
SPECC1-203ENST00000395525 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.42
SPECC1-203ENST00000395525 ZCCHC6Q5VYS8 1495 aaKnown RBP30.09■■■□□ 2.41
SPECC1-203ENST00000395525 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
SPECC1-203ENST00000395525 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
SPECC1-203ENST00000395525 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
SPECC1-203ENST00000395525 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
SPECC1-203ENST00000395525 DCAF1Q9Y4B6 1507 aa28.99■■■□□ 2.23
SPECC1-203ENST00000395525 HRCP23327 699 aa28.88■■■□□ 2.21
SPECC1-203ENST00000395525 PCGF6Q9BYE7 350 aa28.81■■■□□ 2.2
SPECC1-203ENST00000395525 LOC105371045A0A1W2PR82 267 aa28.66■■■□□ 2.18
SPECC1-203ENST00000395525 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.15
SPECC1-203ENST00000395525 ABCC9O60706 1549 aa28.45■■■□□ 2.14
SPECC1-203ENST00000395525 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
SPECC1-203ENST00000395525 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.12
SPECC1-203ENST00000395525 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
SPECC1-203ENST00000395525 TRIM26Q12899 539 aaPredicted RBP28.06■■■□□ 2.08
SPECC1-203ENST00000395525 TRIM41Q8WV44 630 aa28■■■□□ 2.07
SPECC1-203ENST00000395525 FAM9AQ8IZU1 332 aaPredicted RBP27.95■■■□□ 2.06
SPECC1-203ENST00000395525 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.05
SPECC1-203ENST00000395525 EHMT2Q96KQ7 1210 aa27.83■■■□□ 2.05
SPECC1-203ENST00000395525 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
SPECC1-203ENST00000395525 NACADO15069 1562 aa27.67■■■□□ 2.02
SPECC1-203ENST00000395525 WIZO95785 1651 aa27.61■■■□□ 2.01
SPECC1-203ENST00000395525 ZEB1P37275 1124 aaPredicted RBP27.42■■□□□ 1.98
SPECC1-203ENST00000395525 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
SPECC1-203ENST00000395525 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
SPECC1-203ENST00000395525 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
SPECC1-203ENST00000395525 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
SPECC1-203ENST00000395525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.05■■□□□ 1.92
SPECC1-203ENST00000395525 TOP2AP11388 1531 aaKnown RBP27.05■■□□□ 1.92
SPECC1-203ENST00000395525 SMARCA4P51532 1647 aa27.02■■□□□ 1.92
SPECC1-203ENST00000395525 TTBK1Q5TCY1 1321 aaPredicted RBP26.97■■□□□ 1.91
SPECC1-203ENST00000395525 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
SPECC1-203ENST00000395525 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
SPECC1-203ENST00000395525 SOGA1O94964 1423 aa26.9■■□□□ 1.9
SPECC1-203ENST00000395525 CCER1Q8TC90 406 aaPredicted RBP26.9■■□□□ 1.9
SPECC1-203ENST00000395525 SCAF1Q9H7N4 1312 aaKnown RBP26.86■■□□□ 1.89
SPECC1-203ENST00000395525 CEP162Q5TB80 1403 aa26.83■■□□□ 1.89
SPECC1-203ENST00000395525 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
SPECC1-203ENST00000395525 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.88
SPECC1-203ENST00000395525 PABPN1Q86U42 306 aaKnown RBP eCLIP26.72■■□□□ 1.87
SPECC1-203ENST00000395525 TNIKQ9UKE5 1360 aa26.69■■□□□ 1.86
SPECC1-203ENST00000395525 CSRNP3Q8WYN3 585 aa26.68■■□□□ 1.86
SPECC1-203ENST00000395525 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
SPECC1-203ENST00000395525 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
SPECC1-203ENST00000395525 EEA1Q15075 1411 aa26.56■■□□□ 1.84
SPECC1-203ENST00000395525 GOLGA3Q08378 1498 aa26.51■■□□□ 1.83
SPECC1-203ENST00000395525 DIEXFQ68CQ4 756 aaKnown RBP26.5■■□□□ 1.83
SPECC1-203ENST00000395525 NEUROD1Q13562 356 aa26.46■■□□□ 1.83
SPECC1-203ENST00000395525 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
SPECC1-203ENST00000395525 ACIN1Q9UKV3 1341 aaKnown RBP26.43■■□□□ 1.82
SPECC1-203ENST00000395525 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.82
SPECC1-203ENST00000395525 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
SPECC1-203ENST00000395525 HNRNPUL2Q1KMD3 747 aaKnown RBP26.29■■□□□ 1.8
SPECC1-203ENST00000395525 ATAD2BQ9ULI0 1458 aa26.27■■□□□ 1.8
SPECC1-203ENST00000395525 KIF21BO75037 1637 aa26.27■■□□□ 1.8
SPECC1-203ENST00000395525 CLIP1P30622 1438 aa26.26■■□□□ 1.79
SPECC1-203ENST00000395525 PELP1Q8IZL8 1130 aaKnown RBP26.26■■□□□ 1.79
SPECC1-203ENST00000395525 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
SPECC1-203ENST00000395525 BAZ1BQ9UIG0 1483 aaKnown RBP26.21■■□□□ 1.79
SPECC1-203ENST00000395525 RAPGEF2Q9Y4G8 1499 aa26.21■■□□□ 1.79
SPECC1-203ENST00000395525 ZNF316A6NFI3 1004 aaPredicted RBP26.2■■□□□ 1.79
SPECC1-203ENST00000395525 GTF3C3Q9Y5Q9 886 aa26.19■■□□□ 1.78
SPECC1-203ENST00000395525 VPS8Q8N3P4 1428 aa26.15■■□□□ 1.78
SPECC1-203ENST00000395525 CENPBP07199 599 aaPredicted RBP26.14■■□□□ 1.78
SPECC1-203ENST00000395525 APLP2Q06481 763 aa26.02■■□□□ 1.76
SPECC1-203ENST00000395525 YTHDC1Q96MU7 727 aaKnown RBP26.02■■□□□ 1.76
SPECC1-203ENST00000395525 TOP2BQ02880 1626 aa26■■□□□ 1.75
SPECC1-203ENST00000395525 MIER1Q8N108 512 aa25.96■■□□□ 1.75
SPECC1-203ENST00000395525 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
SPECC1-203ENST00000395525 ARAP1Q96P48 1450 aa25.84■■□□□ 1.73
SPECC1-203ENST00000395525 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
SPECC1-203ENST00000395525 KANK4Q5T7N3 995 aaPredicted RBP25.82■■□□□ 1.72
SPECC1-203ENST00000395525 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
SPECC1-203ENST00000395525 CUX1P39880 1505 aa25.77■■□□□ 1.72
SPECC1-203ENST00000395525 DHX57Q6P158 1386 aaKnown RBP25.72■■□□□ 1.71
SPECC1-203ENST00000395525 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
SPECC1-203ENST00000395525 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
SPECC1-203ENST00000395525 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
SPECC1-203ENST00000395525 ARHGAP35Q9NRY4 1499 aa25.56■■□□□ 1.68
SPECC1-203ENST00000395525 RRBP1Q9P2E9 1410 aaKnown RBP25.56■■□□□ 1.68
SPECC1-203ENST00000395525 CFTRP13569 1480 aa25.55■■□□□ 1.68
SPECC1-203ENST00000395525 CLSPNQ9HAW4 1339 aa25.54■■□□□ 1.68
SPECC1-203ENST00000395525 ITGAEP38570 1179 aa25.54■■□□□ 1.68
SPECC1-203ENST00000395525 CCNB3Q8WWL7 1395 aa25.48■■□□□ 1.67
SPECC1-203ENST00000395525 CUX2O14529 1486 aa25.42■■□□□ 1.66
SPECC1-203ENST00000395525 IGF1RP08069 1367 aa25.39■■□□□ 1.66
SPECC1-203ENST00000395525 RAB3GAP2Q9H2M9 1393 aa25.32■■□□□ 1.64
SPECC1-203ENST00000395525 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
SPECC1-203ENST00000395525 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
SPECC1-203ENST00000395525 CARMIL1Q5VZK9 1371 aa25.27■■□□□ 1.64
SPECC1-203ENST00000395525 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
SPECC1-203ENST00000395525 MAPKBP1O60336 1514 aa25.27■■□□□ 1.64
SPECC1-203ENST00000395525 P3H3Q8IVL6 736 aa25.24■■□□□ 1.63
SPECC1-203ENST00000395525 PHLDB1Q86UU1 1377 aa25.23■■□□□ 1.63
SPECC1-203ENST00000395525 CADPSQ9ULU8 1353 aa25.22■■□□□ 1.63
SPECC1-203ENST00000395525 LRRC9Q6ZRR7 1453 aa25.21■■□□□ 1.63
SPECC1-203ENST00000395525 KCNH8Q96L42 1107 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms