RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 NISCHQ9Y2I1 1504 aa50.83■■■■■ 5.73
CACNB1-203ENST00000394310 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
CACNB1-203ENST00000394310 ZCCHC6Q5VYS8 1495 aaKnown RBP42.64■■■■■ 4.42
CACNB1-203ENST00000394310 ABCC9O60706 1549 aa42.21■■■■■ 4.35
CACNB1-203ENST00000394310 DCAF1Q9Y4B6 1507 aa42.16■■■■■ 4.34
CACNB1-203ENST00000394310 DCAF8L2P0C7V8 631 aa41.88■■■■■ 4.29
CACNB1-203ENST00000394310 MYO15BQ96JP2 1530 aa41.83■■■■■ 4.29
CACNB1-203ENST00000394310 NACADO15069 1562 aa41.54■■■■■ 4.24
CACNB1-203ENST00000394310 RB1CC1Q8TDY2 1594 aa41.19■■■■■ 4.18
CACNB1-203ENST00000394310 SHROOM4Q9ULL8 1493 aa40.97■■■■■ 4.15
CACNB1-203ENST00000394310 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
CACNB1-203ENST00000394310 UNC13AQ9UPW8 1703 aa40.25■■■■■ 4.03
CACNB1-203ENST00000394310 BICRAQ9NZM4 1560 aa39.93■■■■□ 3.98
CACNB1-203ENST00000394310 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.96
CACNB1-203ENST00000394310 CECR2Q9BXF3 1484 aa39.42■■■■□ 3.9
CACNB1-203ENST00000394310 SUPT5HO00267 1087 aaKnown RBP39.33■■■■□ 3.89
CACNB1-203ENST00000394310 RSF1Q96T23 1441 aaPredicted RBP39.3■■■■□ 3.88
CACNB1-203ENST00000394310 BAZ1AQ9NRL2 1556 aaPredicted RBP39.27■■■■□ 3.88
CACNB1-203ENST00000394310 MROH2BQ7Z745 1585 aa39.18■■■■□ 3.86
CACNB1-203ENST00000394310 SMARCA4P51532 1647 aa39.09■■■■□ 3.85
CACNB1-203ENST00000394310 WIZO95785 1651 aa38.8■■■■□ 3.8
CACNB1-203ENST00000394310 PEG3Q9GZU2 1588 aa38.75■■■■□ 3.79
CACNB1-203ENST00000394310 EIF4G1Q04637 1599 aaKnown RBP38.73■■■■□ 3.79
CACNB1-203ENST00000394310 SMARCA2P51531 1590 aa38.56■■■■□ 3.76
CACNB1-203ENST00000394310 ATAD2BQ9ULI0 1458 aa38.55■■■■□ 3.76
CACNB1-203ENST00000394310 TOP2AP11388 1531 aaKnown RBP38.48■■■■□ 3.75
CACNB1-203ENST00000394310 NCAPD3P42695 1498 aa38.35■■■■□ 3.73
CACNB1-203ENST00000394310 BAZ1BQ9UIG0 1483 aaKnown RBP38.27■■■■□ 3.72
CACNB1-203ENST00000394310 HMGXB3Q12766 1538 aa38.24■■■■□ 3.71
CACNB1-203ENST00000394310 CC2D2AQ9P2K1 1620 aa38.2■■■■□ 3.71
CACNB1-203ENST00000394310 CCDC88BA6NC98 1476 aa38.07■■■■□ 3.68
CACNB1-203ENST00000394310 DNAJC5BQ9UF47 199 aa37.78■■■■□ 3.64
CACNB1-203ENST00000394310 CHIC1Q5VXU3 224 aa37.64■■■■□ 3.62
CACNB1-203ENST00000394310 CFTRP13569 1480 aa37.39■■■■□ 3.58
CACNB1-203ENST00000394310 CADPSQ9ULU8 1353 aa37.3■■■■□ 3.56
CACNB1-203ENST00000394310 TRIM41Q8WV44 630 aa37.13■■■■□ 3.53
CACNB1-203ENST00000394310 PRDM2Q13029 1718 aa37.12■■■■□ 3.53
CACNB1-203ENST00000394310 ABCC8Q09428 1581 aa37.06■■■■□ 3.52
CACNB1-203ENST00000394310 LAMC3Q9Y6N6 1575 aa37.05■■■■□ 3.52
CACNB1-203ENST00000394310 WRNQ14191 1432 aaPredicted RBP eCLIP36.98■■■■□ 3.51
CACNB1-203ENST00000394310 NESP48681 1621 aa36.91■■■■□ 3.5
CACNB1-203ENST00000394310 FANCD2Q9BXW9 1451 aa36.82■■■■□ 3.48
CACNB1-203ENST00000394310 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
CACNB1-203ENST00000394310 PDS5BQ9NTI5 1447 aa36.77■■■■□ 3.48
CACNB1-203ENST00000394310 TOP2BQ02880 1626 aa36.74■■■■□ 3.47
CACNB1-203ENST00000394310 BIVM-ERCC5R4GMW8 1640 aa36.71■■■■□ 3.47
CACNB1-203ENST00000394310 CUX1P39880 1505 aa36.66■■■■□ 3.46
CACNB1-203ENST00000394310 CEP164Q9UPV0 1460 aa36.62■■■■□ 3.45
CACNB1-203ENST00000394310 KIF21AQ7Z4S6 1674 aa36.48■■■■□ 3.43
CACNB1-203ENST00000394310 DNMBPQ6XZF7 1577 aa36.47■■■■□ 3.43
CACNB1-203ENST00000394310 EEA1Q15075 1411 aa36.4■■■■□ 3.42
CACNB1-203ENST00000394310 TOPBP1Q92547 1522 aa36.4■■■■□ 3.42
CACNB1-203ENST00000394310 SOGA1O94964 1423 aa36.36■■■■□ 3.41
CACNB1-203ENST00000394310 URB2Q14146 1524 aaKnown RBP36.36■■■■□ 3.41
CACNB1-203ENST00000394310 FGD5Q6ZNL6 1462 aa36.3■■■■□ 3.4
CACNB1-203ENST00000394310 MRC2Q9UBG0 1479 aa36.26■■■■□ 3.4
CACNB1-203ENST00000394310 FAM9AQ8IZU1 332 aaPredicted RBP36.26■■■■□ 3.4
CACNB1-203ENST00000394310 ERCC6Q03468 1493 aa36.24■■■■□ 3.39
CACNB1-203ENST00000394310 RUSC2Q8N2Y8 1516 aa36.21■■■■□ 3.39
CACNB1-203ENST00000394310 POLA1P09884 1462 aaPredicted RBP36.19■■■■□ 3.38
CACNB1-203ENST00000394310 CSRNP3Q8WYN3 585 aa36.15■■■■□ 3.38
CACNB1-203ENST00000394310 WDR62O43379 1518 aa36.12■■■■□ 3.37
CACNB1-203ENST00000394310 KIF27Q86VH2 1401 aa36.1■■■■□ 3.37
CACNB1-203ENST00000394310 LOC105371045A0A1W2PR82 267 aa36.08■■■■□ 3.37
CACNB1-203ENST00000394310 ABCA10Q8WWZ4 1543 aa36.06■■■■□ 3.36
CACNB1-203ENST00000394310 THOC2Q8NI27 1593 aaKnown RBP36.02■■■■□ 3.36
CACNB1-203ENST00000394310 RAD54L2Q9Y4B4 1467 aa36.01■■■■□ 3.35
CACNB1-203ENST00000394310 CUX2O14529 1486 aa35.99■■■■□ 3.35
CACNB1-203ENST00000394310 WDR97A6NE52 1622 aa35.91■■■■□ 3.34
CACNB1-203ENST00000394310 TARBP1Q13395 1621 aaKnown RBP35.9■■■■□ 3.34
CACNB1-203ENST00000394310 KIF21BO75037 1637 aa35.87■■■■□ 3.33
CACNB1-203ENST00000394310 IGF1RP08069 1367 aa35.83■■■■□ 3.33
CACNB1-203ENST00000394310 IFT140Q96RY7 1462 aa35.81■■■■□ 3.32
CACNB1-203ENST00000394310 PRXQ9BXM0 1461 aa35.81■■■■□ 3.32
CACNB1-203ENST00000394310 GOLGA3Q08378 1498 aa35.78■■■■□ 3.32
CACNB1-203ENST00000394310 ABCA5Q8WWZ7 1642 aa35.74■■■■□ 3.31
CACNB1-203ENST00000394310 ERICH3Q5RHP9 1530 aa35.72■■■■□ 3.31
CACNB1-203ENST00000394310 TDRD9Q8NDG6 1382 aaKnown RBP35.69■■■■□ 3.3
CACNB1-203ENST00000394310 GAPVD1Q14C86 1478 aa35.68■■■■□ 3.3
CACNB1-203ENST00000394310 TNIKQ9UKE5 1360 aa35.67■■■■□ 3.3
CACNB1-203ENST00000394310 RAPGEF2Q9Y4G8 1499 aa35.65■■■■□ 3.3
CACNB1-203ENST00000394310 EHMT2Q96KQ7 1210 aa35.62■■■■□ 3.29
CACNB1-203ENST00000394310 CARMIL1Q5VZK9 1371 aa35.61■■■■□ 3.29
CACNB1-203ENST00000394310 CUL7Q14999 1698 aa35.56■■■■□ 3.28
CACNB1-203ENST00000394310 UBTFP17480 764 aaKnown RBP35.56■■■■□ 3.28
CACNB1-203ENST00000394310 AQRO60306 1485 aaKnown RBP eCLIP35.52■■■■□ 3.28
CACNB1-203ENST00000394310 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
CACNB1-203ENST00000394310 GRIN2BQ13224 1484 aa35.47■■■■□ 3.27
CACNB1-203ENST00000394310 PBRM1Q86U86 1689 aa35.44■■■■□ 3.26
CACNB1-203ENST00000394310 EIF4G3O43432 1585 aaKnown RBP35.41■■■■□ 3.26
CACNB1-203ENST00000394310 CEP162Q5TB80 1403 aa35.36■■■■□ 3.25
CACNB1-203ENST00000394310 FHAD1B1AJZ9 1412 aa35.33■■■■□ 3.25
CACNB1-203ENST00000394310 ADAMTS12P58397 1594 aa35.27■■■■□ 3.24
CACNB1-203ENST00000394310 MAGI1Q96QZ7 1491 aaPredicted RBP35.24■■■■□ 3.23
CACNB1-203ENST00000394310 SNAPC4Q5SXM2 1469 aa35.19■■■■□ 3.22
CACNB1-203ENST00000394310 CLIP1P30622 1438 aa35.17■■■■□ 3.22
CACNB1-203ENST00000394310 SYNJ2O15056 1496 aa35.08■■■■□ 3.21
CACNB1-203ENST00000394310 CTTNBP2Q8WZ74 1663 aa35.05■■■■□ 3.2
CACNB1-203ENST00000394310 GRIN2AQ12879 1464 aa35.02■■■■□ 3.2
CACNB1-203ENST00000394310 CHMP7Q8WUX9 453 aaPredicted RBP34.95■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms