Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL2P13500 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL2P13500 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCL2P13500 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCL2P13500 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL2P13500 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL2P13500 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL2P13500 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL2P13500 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
CCL2P13500 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCL2P13500 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL2P13500 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL2P13500 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CCL2P13500 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL2P13500 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCL2P13500 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCL2P13500 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL2P13500 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL2P13500 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL2P13500 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL2P13500 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL2P13500 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCL2P13500 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL2P13500 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL2P13500 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CCL2P13500 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCL2P13500 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CCL2P13500 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL2P13500 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL2P13500 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 Z82202.1-201ENST00000623446 1880 ntBASIC16.84■□□□□ 0.29
CCL2P13500 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCL2P13500 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.84■□□□□ 0.29
CCL2P13500 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 AP002982.1-201ENST00000492365 877 ntBASIC16.84■□□□□ 0.29
CCL2P13500 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.84■□□□□ 0.29
CCL2P13500 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.84■□□□□ 0.29
CCL2P13500 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL2P13500 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL2P13500 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL2P13500 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL2P13500 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCL2P13500 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL2P13500 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL2P13500 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL2P13500 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms