RNA–Protein interactions for RNA: ENST00000453722.6

LINC00511-201, long intergenic non-protein coding RNA 511, humanhuman

TSL 2 BASIC

Gene LINC00511, Length 1,716 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-201ENST00000453722 NISCHQ9Y2I1 1504 aa47.26■■■■■ 5.16
LINC00511-201ENST00000453722 CCDC180Q9P1Z9 1646 aa41.99■■■■■ 4.31
LINC00511-201ENST00000453722 ABCC9O60706 1549 aa41.34■■■■■ 4.21
LINC00511-201ENST00000453722 DCAF8L2P0C7V8 631 aa39.74■■■■□ 3.95
LINC00511-201ENST00000453722 RB1CC1Q8TDY2 1594 aa39.61■■■■□ 3.93
LINC00511-201ENST00000453722 NACADO15069 1562 aa39.51■■■■□ 3.92
LINC00511-201ENST00000453722 ZCCHC6Q5VYS8 1495 aaKnown RBP39.35■■■■□ 3.89
LINC00511-201ENST00000453722 MYO15BQ96JP2 1530 aa39.16■■■■□ 3.86
LINC00511-201ENST00000453722 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
LINC00511-201ENST00000453722 UNC13AQ9UPW8 1703 aa38.72■■■■□ 3.79
LINC00511-201ENST00000453722 PABPN1Q86U42 306 aaKnown RBP eCLIP38.66■■■■□ 3.78
LINC00511-201ENST00000453722 SCRIBQ14160 1630 aa38.48■■■■□ 3.75
LINC00511-201ENST00000453722 BICRAQ9NZM4 1560 aa38.41■■■■□ 3.74
LINC00511-201ENST00000453722 DNAJC5BQ9UF47 199 aa37.99■■■■□ 3.67
LINC00511-201ENST00000453722 SHROOM4Q9ULL8 1493 aa37.89■■■■□ 3.66
LINC00511-201ENST00000453722 EIF4G1Q04637 1599 aaKnown RBP37.44■■■■□ 3.58
LINC00511-201ENST00000453722 CC2D2AQ9P2K1 1620 aa37.32■■■■□ 3.57
LINC00511-201ENST00000453722 CECR2Q9BXF3 1484 aa37.11■■■■□ 3.53
LINC00511-201ENST00000453722 SMARCA4P51532 1647 aa36.7■■■■□ 3.47
LINC00511-201ENST00000453722 BAZ1AQ9NRL2 1556 aaPredicted RBP36.64■■■■□ 3.46
LINC00511-201ENST00000453722 ATAD2BQ9ULI0 1458 aa36.52■■■■□ 3.44
LINC00511-201ENST00000453722 MROH2BQ7Z745 1585 aa36.48■■■■□ 3.43
LINC00511-201ENST00000453722 NCAPD3P42695 1498 aa36.46■■■■□ 3.43
LINC00511-201ENST00000453722 SMARCA2P51531 1590 aa36.45■■■■□ 3.43
LINC00511-201ENST00000453722 HMGXB3Q12766 1538 aa36.28■■■■□ 3.4
LINC00511-201ENST00000453722 PEG3Q9GZU2 1588 aa36.26■■■■□ 3.4
LINC00511-201ENST00000453722 BAZ1BQ9UIG0 1483 aaKnown RBP36.26■■■■□ 3.39
LINC00511-201ENST00000453722 WIZO95785 1651 aa36.09■■■■□ 3.37
LINC00511-201ENST00000453722 RSF1Q96T23 1441 aaPredicted RBP36.01■■■■□ 3.36
LINC00511-201ENST00000453722 NESP48681 1621 aa35.74■■■■□ 3.31
LINC00511-201ENST00000453722 TOP2AP11388 1531 aaKnown RBP35.66■■■■□ 3.3
LINC00511-201ENST00000453722 ERCC6Q03468 1493 aa35.64■■■■□ 3.3
LINC00511-201ENST00000453722 LAMC3Q9Y6N6 1575 aa35.53■■■■□ 3.28
LINC00511-201ENST00000453722 CADPSQ9ULU8 1353 aa35.44■■■■□ 3.26
LINC00511-201ENST00000453722 PDS5BQ9NTI5 1447 aa35.33■■■■□ 3.25
LINC00511-201ENST00000453722 KIF21AQ7Z4S6 1674 aa35.28■■■■□ 3.24
LINC00511-201ENST00000453722 CCDC88BA6NC98 1476 aa35.26■■■■□ 3.24
LINC00511-201ENST00000453722 SUPT5HO00267 1087 aaKnown RBP35.21■■■■□ 3.23
LINC00511-201ENST00000453722 CFTRP13569 1480 aa35.2■■■■□ 3.23
LINC00511-201ENST00000453722 CUX2O14529 1486 aa35.16■■■■□ 3.22
LINC00511-201ENST00000453722 THOC2Q8NI27 1593 aaKnown RBP35.14■■■■□ 3.22
LINC00511-201ENST00000453722 FANCD2Q9BXW9 1451 aa35.08■■■■□ 3.21
LINC00511-201ENST00000453722 CEP164Q9UPV0 1460 aa35.04■■■■□ 3.2
LINC00511-201ENST00000453722 MRC2Q9UBG0 1479 aa34.98■■■■□ 3.19
LINC00511-201ENST00000453722 PRDM2Q13029 1718 aa34.89■■■■□ 3.18
LINC00511-201ENST00000453722 WDR62O43379 1518 aa34.84■■■■□ 3.17
LINC00511-201ENST00000453722 URB2Q14146 1524 aaKnown RBP34.72■■■■□ 3.15
LINC00511-201ENST00000453722 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
LINC00511-201ENST00000453722 DNMBPQ6XZF7 1577 aa34.42■■■■□ 3.1
LINC00511-201ENST00000453722 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
LINC00511-201ENST00000453722 IFT140Q96RY7 1462 aa34.26■■■■□ 3.08
LINC00511-201ENST00000453722 CUX1P39880 1505 aa34.22■■■■□ 3.07
LINC00511-201ENST00000453722 POLA1P09884 1462 aaPredicted RBP34.21■■■■□ 3.07
LINC00511-201ENST00000453722 DNAJC5Q9H3Z4 198 aa34.21■■■■□ 3.07
LINC00511-201ENST00000453722 ZNF608Q9ULD9 1512 aaPredicted RBP34.19■■■■□ 3.06
LINC00511-201ENST00000453722 FGD5Q6ZNL6 1462 aa34.13■■■■□ 3.05
LINC00511-201ENST00000453722 RAD54L2Q9Y4B4 1467 aa34.11■■■■□ 3.05
LINC00511-201ENST00000453722 TARBP1Q13395 1621 aaKnown RBP34.09■■■■□ 3.05
LINC00511-201ENST00000453722 SOGA1O94964 1423 aa34.07■■■■□ 3.04
LINC00511-201ENST00000453722 EIF4G3O43432 1585 aaKnown RBP34.03■■■■□ 3.04
LINC00511-201ENST00000453722 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.03
LINC00511-201ENST00000453722 WRNQ14191 1432 aaPredicted RBP eCLIP33.98■■■■□ 3.03
LINC00511-201ENST00000453722 TDRD9Q8NDG6 1382 aaKnown RBP33.94■■■■□ 3.02
LINC00511-201ENST00000453722 SYNJ1O43426 1573 aa33.91■■■■□ 3.02
LINC00511-201ENST00000453722 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
LINC00511-201ENST00000453722 BIVM-ERCC5R4GMW8 1640 aa33.84■■■■□ 3.01
LINC00511-201ENST00000453722 WDR97A6NE52 1622 aa33.78■■■■□ 3
LINC00511-201ENST00000453722 OSCARQ8IYS5 282 aa33.76■■■□□ 2.99
LINC00511-201ENST00000453722 ABCA10Q8WWZ4 1543 aa33.73■■■□□ 2.99
LINC00511-201ENST00000453722 FBLN2P98095 1184 aa33.7■■■□□ 2.99
LINC00511-201ENST00000453722 SNAPC4Q5SXM2 1469 aa33.68■■■□□ 2.98
LINC00511-201ENST00000453722 GAPVD1Q14C86 1478 aa33.67■■■□□ 2.98
LINC00511-201ENST00000453722 GRIN2BQ13224 1484 aa33.66■■■□□ 2.98
LINC00511-201ENST00000453722 ABCA5Q8WWZ7 1642 aa33.61■■■□□ 2.97
LINC00511-201ENST00000453722 CHD1O14646 1710 aa33.61■■■□□ 2.97
LINC00511-201ENST00000453722 PBRM1Q86U86 1689 aa33.59■■■□□ 2.97
LINC00511-201ENST00000453722 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
LINC00511-201ENST00000453722 CHMP7Q8WUX9 453 aaPredicted RBP33.51■■■□□ 2.96
LINC00511-201ENST00000453722 SYNJ2O15056 1496 aa33.44■■■□□ 2.94
LINC00511-201ENST00000453722 ADAMTS12P58397 1594 aa33.33■■■□□ 2.93
LINC00511-201ENST00000453722 ERICH3Q5RHP9 1530 aa33.31■■■□□ 2.92
LINC00511-201ENST00000453722 KIF27Q86VH2 1401 aa33.26■■■□□ 2.91
LINC00511-201ENST00000453722 FHAD1B1AJZ9 1412 aa33.25■■■□□ 2.91
LINC00511-201ENST00000453722 TRIM41Q8WV44 630 aa33.24■■■□□ 2.91
LINC00511-201ENST00000453722 GRIN2AQ12879 1464 aa33.24■■■□□ 2.91
LINC00511-201ENST00000453722 RIMBP3CA6NJZ7 1639 aa33.23■■■□□ 2.91
LINC00511-201ENST00000453722 RIMBP3BA6NNM3 1639 aa33.23■■■□□ 2.91
LINC00511-201ENST00000453722 RIMBP3Q9UFD9 1639 aa33.23■■■□□ 2.91
LINC00511-201ENST00000453722 ARHGEF11O15085 1522 aa33.22■■■□□ 2.91
LINC00511-201ENST00000453722 CLASP1Q7Z460 1538 aa33.2■■■□□ 2.9
LINC00511-201ENST00000453722 IGF1RP08069 1367 aa33.12■■■□□ 2.89
LINC00511-201ENST00000453722 CEP170Q5SW79 1584 aa33.09■■■□□ 2.89
LINC00511-201ENST00000453722 NUP160Q12769 1436 aa33.05■■■□□ 2.88
LINC00511-201ENST00000453722 CUL7Q14999 1698 aa33.01■■■□□ 2.87
LINC00511-201ENST00000453722 RUSC2Q8N2Y8 1516 aa33■■■□□ 2.87
LINC00511-201ENST00000453722 CYB5RLQ6IPT4 315 aa32.99■■■□□ 2.87
LINC00511-201ENST00000453722 ARAP1Q96P48 1450 aa32.95■■■□□ 2.87
LINC00511-201ENST00000453722 CARMIL1Q5VZK9 1371 aa32.94■■■□□ 2.86
LINC00511-201ENST00000453722 ERCC6L2Q5T890 1561 aa32.83■■■□□ 2.85
LINC00511-201ENST00000453722 SHROOM2Q13796 1616 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms