RNA–Protein interactions for RNA: ENST00000307526.3

CMTM8-201, Transcript of CKLF like MARVEL transmembrane domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM8, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM8-201ENST00000307526 NISCHQ9Y2I1 1504 aa47.65■■■■■ 5.22
CMTM8-201ENST00000307526 CCDC180Q9P1Z9 1646 aa42.35■■■■■ 4.37
CMTM8-201ENST00000307526 ABCC9O60706 1549 aa41.78■■■■■ 4.28
CMTM8-201ENST00000307526 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
CMTM8-201ENST00000307526 RB1CC1Q8TDY2 1594 aa40.05■■■■■ 4
CMTM8-201ENST00000307526 NACADO15069 1562 aa39.97■■■■□ 3.99
CMTM8-201ENST00000307526 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
CMTM8-201ENST00000307526 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
CMTM8-201ENST00000307526 DCAF1Q9Y4B6 1507 aa39.4■■■■□ 3.9
CMTM8-201ENST00000307526 PABPN1Q86U42 306 aaKnown RBP eCLIP39.09■■■■□ 3.85
CMTM8-201ENST00000307526 UNC13AQ9UPW8 1703 aa38.98■■■■□ 3.83
CMTM8-201ENST00000307526 BICRAQ9NZM4 1560 aa38.81■■■■□ 3.8
CMTM8-201ENST00000307526 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
CMTM8-201ENST00000307526 DNAJC5BQ9UF47 199 aa38.62■■■■□ 3.77
CMTM8-201ENST00000307526 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
CMTM8-201ENST00000307526 EIF4G1Q04637 1599 aaKnown RBP37.83■■■■□ 3.65
CMTM8-201ENST00000307526 CC2D2AQ9P2K1 1620 aa37.72■■■■□ 3.63
CMTM8-201ENST00000307526 CECR2Q9BXF3 1484 aa37.58■■■■□ 3.61
CMTM8-201ENST00000307526 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
CMTM8-201ENST00000307526 BAZ1AQ9NRL2 1556 aaPredicted RBP36.93■■■■□ 3.5
CMTM8-201ENST00000307526 NCAPD3P42695 1498 aa36.93■■■■□ 3.5
CMTM8-201ENST00000307526 ATAD2BQ9ULI0 1458 aa36.9■■■■□ 3.5
CMTM8-201ENST00000307526 SMARCA2P51531 1590 aa36.82■■■■□ 3.48
CMTM8-201ENST00000307526 MROH2BQ7Z745 1585 aa36.71■■■■□ 3.47
CMTM8-201ENST00000307526 HMGXB3Q12766 1538 aa36.65■■■■□ 3.46
CMTM8-201ENST00000307526 PEG3Q9GZU2 1588 aa36.61■■■■□ 3.45
CMTM8-201ENST00000307526 BAZ1BQ9UIG0 1483 aaKnown RBP36.57■■■■□ 3.45
CMTM8-201ENST00000307526 RSF1Q96T23 1441 aaPredicted RBP36.25■■■■□ 3.39
CMTM8-201ENST00000307526 WIZO95785 1651 aa36.25■■■■□ 3.39
CMTM8-201ENST00000307526 NESP48681 1621 aa36.07■■■■□ 3.36
CMTM8-201ENST00000307526 ERCC6Q03468 1493 aa36.05■■■■□ 3.36
CMTM8-201ENST00000307526 LAMC3Q9Y6N6 1575 aa35.92■■■■□ 3.34
CMTM8-201ENST00000307526 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
CMTM8-201ENST00000307526 CADPSQ9ULU8 1353 aa35.88■■■■□ 3.33
CMTM8-201ENST00000307526 PDS5BQ9NTI5 1447 aa35.78■■■■□ 3.32
CMTM8-201ENST00000307526 CUX2O14529 1486 aa35.72■■■■□ 3.31
CMTM8-201ENST00000307526 CFTRP13569 1480 aa35.57■■■■□ 3.28
CMTM8-201ENST00000307526 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
CMTM8-201ENST00000307526 CCDC88BA6NC98 1476 aa35.52■■■■□ 3.28
CMTM8-201ENST00000307526 THOC2Q8NI27 1593 aaKnown RBP35.49■■■■□ 3.27
CMTM8-201ENST00000307526 FANCD2Q9BXW9 1451 aa35.41■■■■□ 3.26
CMTM8-201ENST00000307526 CEP164Q9UPV0 1460 aa35.38■■■■□ 3.25
CMTM8-201ENST00000307526 MRC2Q9UBG0 1479 aa35.37■■■■□ 3.25
CMTM8-201ENST00000307526 SUPT5HO00267 1087 aaKnown RBP35.26■■■■□ 3.24
CMTM8-201ENST00000307526 WDR62O43379 1518 aa35.22■■■■□ 3.23
CMTM8-201ENST00000307526 PRDM2Q13029 1718 aa35.08■■■■□ 3.21
CMTM8-201ENST00000307526 URB2Q14146 1524 aaKnown RBP35.04■■■■□ 3.2
CMTM8-201ENST00000307526 DNAJC5Q9H3Z4 198 aa34.98■■■■□ 3.19
CMTM8-201ENST00000307526 ABCC8Q09428 1581 aa34.83■■■■□ 3.17
CMTM8-201ENST00000307526 TOPBP1Q92547 1522 aa34.81■■■■□ 3.16
CMTM8-201ENST00000307526 DNMBPQ6XZF7 1577 aa34.71■■■■□ 3.15
CMTM8-201ENST00000307526 IFT140Q96RY7 1462 aa34.67■■■■□ 3.14
CMTM8-201ENST00000307526 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
CMTM8-201ENST00000307526 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
CMTM8-201ENST00000307526 CUX1P39880 1505 aa34.45■■■■□ 3.1
CMTM8-201ENST00000307526 SOGA1O94964 1423 aa34.41■■■■□ 3.1
CMTM8-201ENST00000307526 FGD5Q6ZNL6 1462 aa34.39■■■■□ 3.1
CMTM8-201ENST00000307526 TARBP1Q13395 1621 aaKnown RBP34.38■■■■□ 3.09
CMTM8-201ENST00000307526 RAD54L2Q9Y4B4 1467 aa34.38■■■■□ 3.09
CMTM8-201ENST00000307526 AQRO60306 1485 aaKnown RBP eCLIP34.33■■■■□ 3.09
CMTM8-201ENST00000307526 OSCARQ8IYS5 282 aa34.32■■■■□ 3.08
CMTM8-201ENST00000307526 EIF4G3O43432 1585 aaKnown RBP34.28■■■■□ 3.08
CMTM8-201ENST00000307526 TDRD9Q8NDG6 1382 aaKnown RBP34.25■■■■□ 3.07
CMTM8-201ENST00000307526 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.06
CMTM8-201ENST00000307526 WDR97A6NE52 1622 aa34.11■■■■□ 3.05
CMTM8-201ENST00000307526 TOP2BQ02880 1626 aa34.06■■■■□ 3.04
CMTM8-201ENST00000307526 ABCA10Q8WWZ4 1543 aa34.04■■■■□ 3.04
CMTM8-201ENST00000307526 FBLN2P98095 1184 aa34.04■■■■□ 3.04
CMTM8-201ENST00000307526 SYNJ1O43426 1573 aa34.03■■■■□ 3.04
CMTM8-201ENST00000307526 BIVM-ERCC5R4GMW8 1640 aa34.02■■■■□ 3.04
CMTM8-201ENST00000307526 GRIN2BQ13224 1484 aa34.01■■■■□ 3.03
CMTM8-201ENST00000307526 GAPVD1Q14C86 1478 aa33.98■■■■□ 3.03
CMTM8-201ENST00000307526 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
CMTM8-201ENST00000307526 MAGI1Q96QZ7 1491 aaPredicted RBP33.92■■■■□ 3.02
CMTM8-201ENST00000307526 CHMP7Q8WUX9 453 aaPredicted RBP33.91■■■■□ 3.02
CMTM8-201ENST00000307526 CHD1O14646 1710 aa33.85■■■■□ 3.01
CMTM8-201ENST00000307526 ABCA5Q8WWZ7 1642 aa33.85■■■■□ 3.01
CMTM8-201ENST00000307526 SYNJ2O15056 1496 aa33.8■■■■□ 3
CMTM8-201ENST00000307526 PBRM1Q86U86 1689 aa33.77■■■■□ 3
CMTM8-201ENST00000307526 TRIM41Q8WV44 630 aa33.75■■■□□ 2.99
CMTM8-201ENST00000307526 ARHGEF11O15085 1522 aa33.63■■■□□ 2.97
CMTM8-201ENST00000307526 ERICH3Q5RHP9 1530 aa33.62■■■□□ 2.97
CMTM8-201ENST00000307526 RIMBP3CA6NJZ7 1639 aa33.61■■■□□ 2.97
CMTM8-201ENST00000307526 RIMBP3BA6NNM3 1639 aa33.61■■■□□ 2.97
CMTM8-201ENST00000307526 RIMBP3Q9UFD9 1639 aa33.61■■■□□ 2.97
CMTM8-201ENST00000307526 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
CMTM8-201ENST00000307526 ADAMTS12P58397 1594 aa33.55■■■□□ 2.96
CMTM8-201ENST00000307526 CLASP1Q7Z460 1538 aa33.55■■■□□ 2.96
CMTM8-201ENST00000307526 GRIN2AQ12879 1464 aa33.54■■■□□ 2.96
CMTM8-201ENST00000307526 KIF27Q86VH2 1401 aa33.53■■■□□ 2.96
CMTM8-201ENST00000307526 CYB5RLQ6IPT4 315 aa33.46■■■□□ 2.95
CMTM8-201ENST00000307526 IGF1RP08069 1367 aa33.43■■■□□ 2.94
CMTM8-201ENST00000307526 NUP160Q12769 1436 aa33.42■■■□□ 2.94
CMTM8-201ENST00000307526 ARAP1Q96P48 1450 aa33.35■■■□□ 2.93
CMTM8-201ENST00000307526 CEP170Q5SW79 1584 aa33.34■■■□□ 2.93
CMTM8-201ENST00000307526 CARMIL1Q5VZK9 1371 aa33.23■■■□□ 2.91
CMTM8-201ENST00000307526 CUL7Q14999 1698 aa33.21■■■□□ 2.91
CMTM8-201ENST00000307526 JPH4Q96JJ6 628 aa33.18■■■□□ 2.9
CMTM8-201ENST00000307526 RUSC2Q8N2Y8 1516 aa33.11■■■□□ 2.89
CMTM8-201ENST00000307526 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms