RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 NISCHQ9Y2I1 1504 aa40.1■■■■■ 4.01
UBTF-203ENST00000393606 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
UBTF-203ENST00000393606 SUPT5HO00267 1087 aaKnown RBP33.97■■■■□ 3.03
UBTF-203ENST00000393606 DCAF8L2P0C7V8 631 aa33.96■■■■□ 3.03
UBTF-203ENST00000393606 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
UBTF-203ENST00000393606 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
UBTF-203ENST00000393606 CHIC1Q5VXU3 224 aa32.72■■■□□ 2.83
UBTF-203ENST00000393606 DCAF1Q9Y4B6 1507 aa32.63■■■□□ 2.81
UBTF-203ENST00000393606 MYO15BQ96JP2 1530 aa32.59■■■□□ 2.81
UBTF-203ENST00000393606 SCRIBQ14160 1630 aa32.19■■■□□ 2.74
UBTF-203ENST00000393606 ABCC9O60706 1549 aa32.02■■■□□ 2.72
UBTF-203ENST00000393606 LOC105371045A0A1W2PR82 267 aa31.99■■■□□ 2.71
UBTF-203ENST00000393606 HRCP23327 699 aa31.89■■■□□ 2.7
UBTF-203ENST00000393606 PCGF6Q9BYE7 350 aa31.83■■■□□ 2.69
UBTF-203ENST00000393606 RSF1Q96T23 1441 aaPredicted RBP31.79■■■□□ 2.68
UBTF-203ENST00000393606 RB1CC1Q8TDY2 1594 aa31.5■■■□□ 2.63
UBTF-203ENST00000393606 CECR2Q9BXF3 1484 aa31.49■■■□□ 2.63
UBTF-203ENST00000393606 FAM9AQ8IZU1 332 aaPredicted RBP31.49■■■□□ 2.63
UBTF-203ENST00000393606 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
UBTF-203ENST00000393606 NACADO15069 1562 aa31.47■■■□□ 2.63
UBTF-203ENST00000393606 EHMT2Q96KQ7 1210 aa31.46■■■□□ 2.63
UBTF-203ENST00000393606 PPARGC1BQ86YN6 1023 aaKnown RBP31.39■■■□□ 2.61
UBTF-203ENST00000393606 MROH2BQ7Z745 1585 aa31.3■■■□□ 2.6
UBTF-203ENST00000393606 WIZO95785 1651 aa31.15■■■□□ 2.58
UBTF-203ENST00000393606 TRIM26Q12899 539 aaPredicted RBP31■■■□□ 2.55
UBTF-203ENST00000393606 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.52
UBTF-203ENST00000393606 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
UBTF-203ENST00000393606 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.49
UBTF-203ENST00000393606 SMARCA4P51532 1647 aa30.56■■■□□ 2.48
UBTF-203ENST00000393606 ABCC8Q09428 1581 aa30.52■■■□□ 2.48
UBTF-203ENST00000393606 CCDC88BA6NC98 1476 aa30.51■■■□□ 2.47
UBTF-203ENST00000393606 TOP2AP11388 1531 aaKnown RBP30.48■■■□□ 2.47
UBTF-203ENST00000393606 EIF4G1Q04637 1599 aaKnown RBP30.43■■■□□ 2.46
UBTF-203ENST00000393606 PELP1Q8IZL8 1130 aaKnown RBP30.39■■■□□ 2.45
UBTF-203ENST00000393606 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
UBTF-203ENST00000393606 TTBK1Q5TCY1 1321 aaPredicted RBP30.36■■■□□ 2.45
UBTF-203ENST00000393606 ZEB1P37275 1124 aaPredicted RBP30.29■■■□□ 2.44
UBTF-203ENST00000393606 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
UBTF-203ENST00000393606 SOGA1O94964 1423 aa30.22■■■□□ 2.43
UBTF-203ENST00000393606 RUSC2Q8N2Y8 1516 aa30.11■■■□□ 2.41
UBTF-203ENST00000393606 UBTFP17480 764 aaKnown RBP30.08■■■□□ 2.41
UBTF-203ENST00000393606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.04■■■□□ 2.4
UBTF-203ENST00000393606 SCAF1Q9H7N4 1312 aaKnown RBP30.04■■■□□ 2.4
UBTF-203ENST00000393606 CSRNP3Q8WYN3 585 aa30.01■■■□□ 2.39
UBTF-203ENST00000393606 CEP162Q5TB80 1403 aa29.95■■■□□ 2.39
UBTF-203ENST00000393606 WRNQ14191 1432 aaPredicted RBP eCLIP29.89■■■□□ 2.38
UBTF-203ENST00000393606 CCER1Q8TC90 406 aaPredicted RBP29.88■■■□□ 2.37
UBTF-203ENST00000393606 ATAD2BQ9ULI0 1458 aa29.85■■■□□ 2.37
UBTF-203ENST00000393606 RANGAP1P46060 587 aaPredicted RBP29.82■■■□□ 2.36
UBTF-203ENST00000393606 BAZ1BQ9UIG0 1483 aaKnown RBP29.81■■■□□ 2.36
UBTF-203ENST00000393606 TNIKQ9UKE5 1360 aa29.8■■■□□ 2.36
UBTF-203ENST00000393606 PEG3Q9GZU2 1588 aa29.78■■■□□ 2.36
UBTF-203ENST00000393606 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
UBTF-203ENST00000393606 EEA1Q15075 1411 aa29.7■■■□□ 2.35
UBTF-203ENST00000393606 GOLGA3Q08378 1498 aa29.66■■■□□ 2.34
UBTF-203ENST00000393606 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
UBTF-203ENST00000393606 HNRNPUL2Q1KMD3 747 aaKnown RBP29.43■■■□□ 2.3
UBTF-203ENST00000393606 RAPGEF2Q9Y4G8 1499 aa29.43■■■□□ 2.3
UBTF-203ENST00000393606 CLIP1P30622 1438 aa29.42■■■□□ 2.3
UBTF-203ENST00000393606 KIF21BO75037 1637 aa29.33■■■□□ 2.29
UBTF-203ENST00000393606 APLP2Q06481 763 aa29.31■■■□□ 2.28
UBTF-203ENST00000393606 TOP2BQ02880 1626 aa29.25■■■□□ 2.27
UBTF-203ENST00000393606 NEUROD1Q13562 356 aa29.25■■■□□ 2.27
UBTF-203ENST00000393606 DIEXFQ68CQ4 756 aaKnown RBP29.25■■■□□ 2.27
UBTF-203ENST00000393606 ACIN1Q9UKV3 1341 aaKnown RBP29.23■■■□□ 2.27
UBTF-203ENST00000393606 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
UBTF-203ENST00000393606 NCAPD3P42695 1498 aa29.18■■■□□ 2.26
UBTF-203ENST00000393606 MYT1Q01538 1121 aa29.14■■■□□ 2.25
UBTF-203ENST00000393606 CUX1P39880 1505 aa29.11■■■□□ 2.25
UBTF-203ENST00000393606 HMGXB3Q12766 1538 aa29.09■■■□□ 2.25
UBTF-203ENST00000393606 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
UBTF-203ENST00000393606 GTF3C3Q9Y5Q9 886 aa28.99■■■□□ 2.23
UBTF-203ENST00000393606 PRXQ9BXM0 1461 aa28.97■■■□□ 2.23
UBTF-203ENST00000393606 CFTRP13569 1480 aa28.97■■■□□ 2.23
UBTF-203ENST00000393606 KANK4Q5T7N3 995 aaPredicted RBP28.97■■■□□ 2.23
UBTF-203ENST00000393606 CENPBP07199 599 aaPredicted RBP28.96■■■□□ 2.23
UBTF-203ENST00000393606 KIF27Q86VH2 1401 aa28.95■■■□□ 2.22
UBTF-203ENST00000393606 ZNF316A6NFI3 1004 aaPredicted RBP28.9■■■□□ 2.22
UBTF-203ENST00000393606 ARAP1Q96P48 1450 aa28.89■■■□□ 2.22
UBTF-203ENST00000393606 ERICH3Q5RHP9 1530 aa28.86■■■□□ 2.21
UBTF-203ENST00000393606 ITGAEP38570 1179 aa28.8■■■□□ 2.2
UBTF-203ENST00000393606 CUX2O14529 1486 aa28.79■■■□□ 2.2
UBTF-203ENST00000393606 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
UBTF-203ENST00000393606 YTHDC1Q96MU7 727 aaKnown RBP28.74■■■□□ 2.19
UBTF-203ENST00000393606 P3H3Q8IVL6 736 aa28.69■■■□□ 2.18
UBTF-203ENST00000393606 IGF1RP08069 1367 aa28.69■■■□□ 2.18
UBTF-203ENST00000393606 ARHGAP35Q9NRY4 1499 aa28.68■■■□□ 2.18
UBTF-203ENST00000393606 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
UBTF-203ENST00000393606 FGD5Q6ZNL6 1462 aa28.64■■■□□ 2.18
UBTF-203ENST00000393606 ATP1B4Q9UN42 357 aaPredicted RBP28.64■■■□□ 2.18
UBTF-203ENST00000393606 MIER1Q8N108 512 aa28.61■■■□□ 2.17
UBTF-203ENST00000393606 CARMIL1Q5VZK9 1371 aa28.6■■■□□ 2.17
UBTF-203ENST00000393606 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
UBTF-203ENST00000393606 DHX57Q6P158 1386 aaKnown RBP28.53■■■□□ 2.16
UBTF-203ENST00000393606 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
UBTF-203ENST00000393606 NESP48681 1621 aa28.5■■■□□ 2.15
UBTF-203ENST00000393606 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
UBTF-203ENST00000393606 CCNB3Q8WWL7 1395 aa28.46■■■□□ 2.15
UBTF-203ENST00000393606 RRBP1Q9P2E9 1410 aaKnown RBP28.43■■■□□ 2.14
UBTF-203ENST00000393606 FAM50AQ14320 339 aaKnown RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms