RNA–Protein interactions for RNA: ENST00000372525.5

C1orf50-201, Transcript of chromosome 1 open reading frame 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf50, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf50-201ENST00000372525 NISCHQ9Y2I1 1504 aa46.16■■■■■ 4.98
C1orf50-201ENST00000372525 CCDC180Q9P1Z9 1646 aa40.92■■■■■ 4.14
C1orf50-201ENST00000372525 ABCC9O60706 1549 aa39.56■■■■□ 3.92
C1orf50-201ENST00000372525 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
C1orf50-201ENST00000372525 DCAF8L2P0C7V8 631 aa38.51■■■■□ 3.76
C1orf50-201ENST00000372525 NACADO15069 1562 aa38.37■■■■□ 3.73
C1orf50-201ENST00000372525 RB1CC1Q8TDY2 1594 aa38.34■■■■□ 3.73
C1orf50-201ENST00000372525 MYO15BQ96JP2 1530 aa38.25■■■■□ 3.71
C1orf50-201ENST00000372525 DCAF1Q9Y4B6 1507 aa38.24■■■■□ 3.71
C1orf50-201ENST00000372525 UNC13AQ9UPW8 1703 aa37.33■■■■□ 3.57
C1orf50-201ENST00000372525 SCRIBQ14160 1630 aa37.33■■■■□ 3.57
C1orf50-201ENST00000372525 PABPN1Q86U42 306 aaKnown RBP eCLIP37.02■■■■□ 3.52
C1orf50-201ENST00000372525 BICRAQ9NZM4 1560 aa36.98■■■■□ 3.51
C1orf50-201ENST00000372525 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.49
C1orf50-201ENST00000372525 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
C1orf50-201ENST00000372525 CECR2Q9BXF3 1484 aa35.83■■■■□ 3.33
C1orf50-201ENST00000372525 BAZ1AQ9NRL2 1556 aaPredicted RBP35.82■■■■□ 3.32
C1orf50-201ENST00000372525 CC2D2AQ9P2K1 1620 aa35.8■■■■□ 3.32
C1orf50-201ENST00000372525 DNAJC5BQ9UF47 199 aa35.75■■■■□ 3.31
C1orf50-201ENST00000372525 SMARCA4P51532 1647 aa35.74■■■■□ 3.31
C1orf50-201ENST00000372525 MROH2BQ7Z745 1585 aa35.54■■■■□ 3.28
C1orf50-201ENST00000372525 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
C1orf50-201ENST00000372525 ATAD2BQ9ULI0 1458 aa35.41■■■■□ 3.26
C1orf50-201ENST00000372525 PEG3Q9GZU2 1588 aa35.37■■■■□ 3.25
C1orf50-201ENST00000372525 NCAPD3P42695 1498 aa35.34■■■■□ 3.25
C1orf50-201ENST00000372525 RSF1Q96T23 1441 aaPredicted RBP35.31■■■■□ 3.24
C1orf50-201ENST00000372525 HMGXB3Q12766 1538 aa35.25■■■■□ 3.23
C1orf50-201ENST00000372525 BAZ1BQ9UIG0 1483 aaKnown RBP35.23■■■■□ 3.23
C1orf50-201ENST00000372525 WIZO95785 1651 aa35.2■■■■□ 3.23
C1orf50-201ENST00000372525 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
C1orf50-201ENST00000372525 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
C1orf50-201ENST00000372525 CCDC88BA6NC98 1476 aa34.45■■■■□ 3.1
C1orf50-201ENST00000372525 LAMC3Q9Y6N6 1575 aa34.4■■■■□ 3.1
C1orf50-201ENST00000372525 CADPSQ9ULU8 1353 aa34.36■■■■□ 3.09
C1orf50-201ENST00000372525 NESP48681 1621 aa34.3■■■■□ 3.08
C1orf50-201ENST00000372525 CFTRP13569 1480 aa34.22■■■■□ 3.07
C1orf50-201ENST00000372525 PDS5BQ9NTI5 1447 aa34.21■■■■□ 3.07
C1orf50-201ENST00000372525 ERCC6Q03468 1493 aa34.2■■■■□ 3.06
C1orf50-201ENST00000372525 PRDM2Q13029 1718 aa34.07■■■■□ 3.05
C1orf50-201ENST00000372525 FANCD2Q9BXW9 1451 aa33.98■■■■□ 3.03
C1orf50-201ENST00000372525 KIF21AQ7Z4S6 1674 aa33.96■■■■□ 3.03
C1orf50-201ENST00000372525 CEP164Q9UPV0 1460 aa33.94■■■■□ 3.02
C1orf50-201ENST00000372525 MRC2Q9UBG0 1479 aa33.77■■■■□ 3
C1orf50-201ENST00000372525 THOC2Q8NI27 1593 aaKnown RBP33.72■■■□□ 2.99
C1orf50-201ENST00000372525 CUX2O14529 1486 aa33.62■■■□□ 2.97
C1orf50-201ENST00000372525 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
C1orf50-201ENST00000372525 WDR62O43379 1518 aa33.6■■■□□ 2.97
C1orf50-201ENST00000372525 URB2Q14146 1524 aaKnown RBP33.54■■■□□ 2.96
C1orf50-201ENST00000372525 DNMBPQ6XZF7 1577 aa33.5■■■□□ 2.95
C1orf50-201ENST00000372525 TOPBP1Q92547 1522 aa33.46■■■□□ 2.95
C1orf50-201ENST00000372525 WRNQ14191 1432 aaPredicted RBP eCLIP33.36■■■□□ 2.93
C1orf50-201ENST00000372525 CUX1P39880 1505 aa33.33■■■□□ 2.93
C1orf50-201ENST00000372525 TOP2BQ02880 1626 aa33.22■■■□□ 2.91
C1orf50-201ENST00000372525 IFT140Q96RY7 1462 aa33.2■■■□□ 2.91
C1orf50-201ENST00000372525 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.9
C1orf50-201ENST00000372525 POLA1P09884 1462 aaPredicted RBP33.19■■■□□ 2.9
C1orf50-201ENST00000372525 FGD5Q6ZNL6 1462 aa33.19■■■□□ 2.9
C1orf50-201ENST00000372525 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
C1orf50-201ENST00000372525 SOGA1O94964 1423 aa33.11■■■□□ 2.89
C1orf50-201ENST00000372525 TARBP1Q13395 1621 aaKnown RBP33.02■■■□□ 2.88
C1orf50-201ENST00000372525 RAD54L2Q9Y4B4 1467 aa33.01■■■□□ 2.88
C1orf50-201ENST00000372525 TRIM41Q8WV44 630 aa32.94■■■□□ 2.86
C1orf50-201ENST00000372525 WDR97A6NE52 1622 aa32.92■■■□□ 2.86
C1orf50-201ENST00000372525 ABCA10Q8WWZ4 1543 aa32.9■■■□□ 2.86
C1orf50-201ENST00000372525 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
C1orf50-201ENST00000372525 EIF4G3O43432 1585 aaKnown RBP32.86■■■□□ 2.85
C1orf50-201ENST00000372525 TDRD9Q8NDG6 1382 aaKnown RBP32.83■■■□□ 2.85
C1orf50-201ENST00000372525 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.84
C1orf50-201ENST00000372525 GAPVD1Q14C86 1478 aa32.74■■■□□ 2.83
C1orf50-201ENST00000372525 ABCA5Q8WWZ7 1642 aa32.71■■■□□ 2.83
C1orf50-201ENST00000372525 GRIN2BQ13224 1484 aa32.7■■■□□ 2.83
C1orf50-201ENST00000372525 CHIC1Q5VXU3 224 aa32.69■■■□□ 2.82
C1orf50-201ENST00000372525 KIF27Q86VH2 1401 aa32.68■■■□□ 2.82
C1orf50-201ENST00000372525 PBRM1Q86U86 1689 aa32.64■■■□□ 2.82
C1orf50-201ENST00000372525 MAGI1Q96QZ7 1491 aaPredicted RBP32.57■■■□□ 2.8
C1orf50-201ENST00000372525 ERICH3Q5RHP9 1530 aa32.56■■■□□ 2.8
C1orf50-201ENST00000372525 SNAPC4Q5SXM2 1469 aa32.55■■■□□ 2.8
C1orf50-201ENST00000372525 FBLN2P98095 1184 aa32.46■■■□□ 2.79
C1orf50-201ENST00000372525 CHMP7Q8WUX9 453 aaPredicted RBP32.44■■■□□ 2.78
C1orf50-201ENST00000372525 SYNJ2O15056 1496 aa32.42■■■□□ 2.78
C1orf50-201ENST00000372525 FHAD1B1AJZ9 1412 aa32.4■■■□□ 2.78
C1orf50-201ENST00000372525 ADAMTS12P58397 1594 aa32.39■■■□□ 2.78
C1orf50-201ENST00000372525 CUL7Q14999 1698 aa32.38■■■□□ 2.77
C1orf50-201ENST00000372525 EEA1Q15075 1411 aa32.37■■■□□ 2.77
C1orf50-201ENST00000372525 IGF1RP08069 1367 aa32.37■■■□□ 2.77
C1orf50-201ENST00000372525 CHD1O14646 1710 aa32.36■■■□□ 2.77
C1orf50-201ENST00000372525 OSCARQ8IYS5 282 aa32.33■■■□□ 2.77
C1orf50-201ENST00000372525 RUSC2Q8N2Y8 1516 aa32.32■■■□□ 2.76
C1orf50-201ENST00000372525 CARMIL1Q5VZK9 1371 aa32.26■■■□□ 2.75
C1orf50-201ENST00000372525 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
C1orf50-201ENST00000372525 CSRNP3Q8WYN3 585 aa32.2■■■□□ 2.75
C1orf50-201ENST00000372525 FAM9AQ8IZU1 332 aaPredicted RBP32.19■■■□□ 2.74
C1orf50-201ENST00000372525 RAPGEF2Q9Y4G8 1499 aa32.13■■■□□ 2.73
C1orf50-201ENST00000372525 PRXQ9BXM0 1461 aa32.05■■■□□ 2.72
C1orf50-201ENST00000372525 NUP160Q12769 1436 aa32.04■■■□□ 2.72
C1orf50-201ENST00000372525 CEP170Q5SW79 1584 aa32.02■■■□□ 2.72
C1orf50-201ENST00000372525 DNAJC5Q9H3Z4 198 aa32■■■□□ 2.71
C1orf50-201ENST00000372525 CLASP1Q7Z460 1538 aa31.98■■■□□ 2.71
C1orf50-201ENST00000372525 KIF21BO75037 1637 aa31.93■■■□□ 2.7
C1orf50-201ENST00000372525 KIAA0586Q9BVV6 1533 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms