Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.77□□□□□ -0.28e-7■■■■□ 20.6
XRN2Q9H0D6 LTBR-212ENST00000543542 367 ntTSL 27.22□□□□□ -1.254e-6■■■■□ 20.6
XRN2Q9H0D6 MLXIPL-207ENST00000453275 690 ntTSL 523.32■■□□□ 1.322e-7■■■■□ 20.6
XRN2Q9H0D6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.942e-6■■■■□ 20.6
XRN2Q9H0D6 MACROD1-208ENST00000545464 899 ntTSL 330.29■■■□□ 2.442e-6■■■■□ 20.6
XRN2Q9H0D6 MACROD1-206ENST00000542359 459 ntTSL 318.85■□□□□ 0.612e-6■■■■□ 20.6
XRN2Q9H0D6 BHLHE40-202ENST00000460806 396 ntTSL 28.03□□□□□ -1.124e-6■■■■□ 20.5
XRN2Q9H0D6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.062e-9■■■■□ 20.5
XRN2Q9H0D6 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.27□□□□□ -0.136e-7■■■■□ 20.5
XRN2Q9H0D6 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.93□□□□□ -0.346e-7■■■■□ 20.5
XRN2Q9H0D6 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC10.66□□□□□ -0.76e-7■■■■□ 20.5
XRN2Q9H0D6 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC10.13□□□□□ -0.796e-7■■■■□ 20.5
XRN2Q9H0D6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.312e-6■■■■□ 20.5
XRN2Q9H0D6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.43■□□□□ 0.222e-6■■■■□ 20.5
XRN2Q9H0D6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.09□□□□□ -0.152e-6■■■■□ 20.5
XRN2Q9H0D6 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-6■■■■□ 20.5
XRN2Q9H0D6 QTRT1-206ENST00000587861 2034 ntTSL 218.37■□□□□ 0.532e-9■■■■□ 20.5
XRN2Q9H0D6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.191e-6■■■■□ 20.5
XRN2Q9H0D6 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)15.87■□□□□ 0.131e-6■■■■□ 20.5
XRN2Q9H0D6 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.21e-6■■■■□ 20.5
XRN2Q9H0D6 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC12.28□□□□□ -0.441e-6■■■■□ 20.5
XRN2Q9H0D6 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC12.28□□□□□ -0.441e-6■■■■□ 20.5
XRN2Q9H0D6 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC11.83□□□□□ -0.521e-6■■■■□ 20.5
XRN2Q9H0D6 GREB1-207ENST00000432985 2052 ntTSL 1 (best)12.52□□□□□ -0.414e-6■■■■□ 20.5
XRN2Q9H0D6 RPS6KA3-206ENST00000492128 553 ntTSL 413.03□□□□□ -0.328e-11■■■■□ 20.5
XRN2Q9H0D6 NCOR2-215ENST00000458234 4675 ntAPPRIS ALT2 TSL 1 (best)14.11□□□□□ -0.153e-6■■■■□ 20.5
XRN2Q9H0D6 PQLC1-201ENST00000351365 2414 ntTSL 218.01■□□□□ 0.471e-6■■■■□ 20.5
XRN2Q9H0D6 PQLC1-204ENST00000466449 2887 ntTSL 216.62■□□□□ 0.251e-6■■■■□ 20.5
XRN2Q9H0D6 PQLC1-205ENST00000469369 593 ntTSL 416.29■□□□□ 0.21e-6■■■■□ 20.5
XRN2Q9H0D6 PQLC1-209ENST00000589000 558 ntTSL 413.92□□□□□ -0.181e-6■■■■□ 20.5
XRN2Q9H0D6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.38■□□□□ 0.531e-6■■■■□ 20.5
XRN2Q9H0D6 GPI-212ENST00000589985 1516 ntTSL 321.69■■□□□ 1.062e-9■■■■□ 20.4
XRN2Q9H0D6 RIPOR3-203ENST00000462493 2698 ntTSL 215.99■□□□□ 0.155e-10■■■■□ 20.4
XRN2Q9H0D6 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.235e-10■■■■□ 20.4
XRN2Q9H0D6 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.395e-10■■■■□ 20.4
XRN2Q9H0D6 NFIC-208ENST00000589537 977 ntTSL 219.78■□□□□ 0.763e-6■■■■□ 20.4
XRN2Q9H0D6 PON2-207ENST00000469716 573 ntTSL 328.73■■■□□ 2.193e-9■■■■□ 20.4
XRN2Q9H0D6 PTPN18-213ENST00000489215 460 ntTSL 428.32■■■□□ 2.123e-9■■■■□ 20.4
XRN2Q9H0D6 RGS12-210ENST00000506631 1530 ntTSL 1 (best)27.77■■■□□ 2.044e-6■■■■□ 20.4
XRN2Q9H0D6 PON2-209ENST00000471883 451 ntTSL 326.93■■□□□ 1.93e-9■■■■□ 20.4
XRN2Q9H0D6 SCRIB-207ENST00000531942 421 ntTSL 226.57■■□□□ 1.843e-9■■■■□ 20.4
XRN2Q9H0D6 RPS6KB2-210ENST00000530623 569 ntTSL 426.37■■□□□ 1.813e-9■■■■□ 20.4
XRN2Q9H0D6 PON2-212ENST00000490778 694 ntTSL 526.36■■□□□ 1.813e-9■■■■□ 20.4
XRN2Q9H0D6 RPL13-203ENST00000399461 879 ntTSL 226.3■■□□□ 1.81e-13■■■■□ 20.4
XRN2Q9H0D6 PON2-204ENST00000455123 1515 ntTSL 1 (best)25.85■■□□□ 1.733e-9■■■■□ 20.4
XRN2Q9H0D6 PTPN18-205ENST00000428843 785 ntTSL 325.63■■□□□ 1.693e-9■■■■□ 20.4
XRN2Q9H0D6 PON2-208ENST00000469926 645 ntTSL 325.38■■□□□ 1.653e-9■■■■□ 20.4
XRN2Q9H0D6 PTOV1-211ENST00000598632 1073 ntTSL 224.94■■□□□ 1.583e-9■■■■□ 20.4
XRN2Q9H0D6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.553e-9■■■■□ 20.4
XRN2Q9H0D6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.45■■□□□ 1.53e-9■■■■□ 20.4
XRN2Q9H0D6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.05■■□□□ 1.443e-9■■■■□ 20.4
XRN2Q9H0D6 FBXO9-205ENST00000461222 435 ntTSL 523.97■■□□□ 1.433e-9■■■■□ 20.4
XRN2Q9H0D6 RPS6KB2-203ENST00000524814 550 ntTSL 322.77■■□□□ 1.243e-9■■■■□ 20.4
XRN2Q9H0D6 CTSD-206ENST00000497544 783 ntTSL 222.73■■□□□ 1.233e-9■■■■□ 20.4
XRN2Q9H0D6 CTSD-209ENST00000637158 1200 ntTSL 522.36■■□□□ 1.173e-9■■■■□ 20.4
XRN2Q9H0D6 RPS6KB2-209ENST00000528964 1806 ntTSL 522.1■■□□□ 1.133e-9■■■■□ 20.4
XRN2Q9H0D6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.66■■□□□ 1.063e-9■■■■□ 20.4
XRN2Q9H0D6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.033e-9■■■■□ 20.4
XRN2Q9H0D6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.023e-9■■■■□ 20.4
XRN2Q9H0D6 PON2-215ENST00000493469 579 ntTSL 221.09■□□□□ 0.973e-9■■■■□ 20.4
XRN2Q9H0D6 PON2-214ENST00000493290 550 ntTSL 421.09■□□□□ 0.973e-9■■■■□ 20.4
XRN2Q9H0D6 SBF1-203ENST00000399627 811 ntTSL 520.93■□□□□ 0.942e-8■■■■□ 20.4
XRN2Q9H0D6 PON2-213ENST00000491069 566 ntTSL 220.49■□□□□ 0.873e-9■■■■□ 20.4
XRN2Q9H0D6 CTSD-203ENST00000429746 690 ntTSL 320.35■□□□□ 0.853e-9■■■■□ 20.4
XRN2Q9H0D6 CTSD-214ENST00000637937 1262 ntTSL 520.2■□□□□ 0.823e-9■■■■□ 20.4
XRN2Q9H0D6 RPS6KB2-212ENST00000556575 850 ntTSL 519.97■□□□□ 0.793e-9■■■■□ 20.4
XRN2Q9H0D6 RPS6KB2-204ENST00000524934 466 ntTSL 319.39■□□□□ 0.693e-9■■■■□ 20.4
XRN2Q9H0D6 RPS6KB2-202ENST00000420069 461 ntTSL 319.11■□□□□ 0.653e-9■■■■□ 20.4
XRN2Q9H0D6 PTOV1-217ENST00000601501 564 ntTSL 218.81■□□□□ 0.63e-9■■■■□ 20.4
XRN2Q9H0D6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.423e-9■■■■□ 20.4
XRN2Q9H0D6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.33e-9■■■■□ 20.4
XRN2Q9H0D6 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.33e-9■■■■□ 20.4
XRN2Q9H0D6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.299e-6■■■■□ 20.4
XRN2Q9H0D6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.253e-9■■■■□ 20.4
XRN2Q9H0D6 KRTAP5-AS1-203ENST00000532922 519 ntTSL 416.07■□□□□ 0.164e-6■■■■□ 20.4
XRN2Q9H0D6 PTOV1-221ENST00000602040 597 ntTSL 215.91■□□□□ 0.143e-9■■■■□ 20.4
XRN2Q9H0D6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.149e-6■■■■□ 20.4
XRN2Q9H0D6 RAI1-202ENST00000395774 2928 ntTSL 215.88■□□□□ 0.132e-6■■■■□ 20.4
XRN2Q9H0D6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.19e-6■■■■□ 20.4
XRN2Q9H0D6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.023e-9■■■■□ 20.4
XRN2Q9H0D6 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.034e-10■■■■□ 20.4
XRN2Q9H0D6 PTOV1-204ENST00000594640 490 ntTSL 314.76□□□□□ -0.053e-9■■■■□ 20.4
XRN2Q9H0D6 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.113e-9■■■■□ 20.4
XRN2Q9H0D6 RPS6KB2-205ENST00000525088 5528 ntTSL 214.25□□□□□ -0.133e-9■■■■□ 20.4
XRN2Q9H0D6 RPL19-208ENST00000585199 402 ntTSL 212.87□□□□□ -0.353e-9■■■■□ 20.4
XRN2Q9H0D6 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.59□□□□□ -0.393e-9■■■■□ 20.4
XRN2Q9H0D6 RPL19-201ENST00000225430 732 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.443e-9■■■■□ 20.4
XRN2Q9H0D6 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.443e-9■■■■□ 20.4
XRN2Q9H0D6 MTA2-203ENST00000526844 627 ntTSL 312.29□□□□□ -0.443e-9■■■■□ 20.4
XRN2Q9H0D6 HNRNPL-204ENST00000595443 2122 ntTSL 211.69□□□□□ -0.544e-10■■■■□ 20.4
XRN2Q9H0D6 CPSF7-221ENST00000543545 495 ntTSL 511.48□□□□□ -0.577e-8■■■■□ 20.4
XRN2Q9H0D6 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.643e-9■■■■□ 20.4
XRN2Q9H0D6 RPL19-202ENST00000577741 1303 ntTSL 210.79□□□□□ -0.683e-9■■■■□ 20.4
XRN2Q9H0D6 KPNA3-201ENST00000261667 4474 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.83e-6■■■■□ 20.4
XRN2Q9H0D6 PON2-210ENST00000478801 555 ntTSL 49.99□□□□□ -0.813e-9■■■■□ 20.4
XRN2Q9H0D6 AC008982.1-202ENST00000602021 342 ntTSL 59.63□□□□□ -0.874e-10■■■■□ 20.4
XRN2Q9H0D6 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC9.13□□□□□ -0.953e-9■■■■□ 20.4
XRN2Q9H0D6 CPSF7-224ENST00000544990 646 ntTSL 38.64□□□□□ -1.037e-8■■■■□ 20.4
XRN2Q9H0D6 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.047e-8■■■■□ 20.4
XRN2Q9H0D6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.283e-9■■■■□ 20.4
Retrieved 100 of 21,068 protein–RNA pairs in 23.9 ms