RNA–Protein interactions for RNA: ENST00000531942.1

SCRIB-207, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 2

Gene SCRIB, Length 421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-207ENST00000531942 NISCHQ9Y2I1 1504 aa54.67■■■■■ 6.34
SCRIB-207ENST00000531942 CCDC180Q9P1Z9 1646 aa49.02■■■■■ 5.44
SCRIB-207ENST00000531942 ABCC9O60706 1549 aa48.98■■■■■ 5.43
SCRIB-207ENST00000531942 RB1CC1Q8TDY2 1594 aa46.64■■■■■ 5.06
SCRIB-207ENST00000531942 NACADO15069 1562 aa46.32■■■■■ 5.01
SCRIB-207ENST00000531942 DCAF8L2P0C7V8 631 aa46.15■■■■■ 4.98
SCRIB-207ENST00000531942 DNAJC5BQ9UF47 199 aa45.86■■■■■ 4.93
SCRIB-207ENST00000531942 MYO15BQ96JP2 1530 aa45.69■■■■■ 4.9
SCRIB-207ENST00000531942 PABPN1Q86U42 306 aaKnown RBP eCLIP45.61■■■■■ 4.89
SCRIB-207ENST00000531942 UNC13AQ9UPW8 1703 aa45.59■■■■■ 4.89
SCRIB-207ENST00000531942 ZCCHC6Q5VYS8 1495 aaKnown RBP45.32■■■■■ 4.85
SCRIB-207ENST00000531942 BICRAQ9NZM4 1560 aa45.28■■■■■ 4.84
SCRIB-207ENST00000531942 DCAF1Q9Y4B6 1507 aa45.14■■■■■ 4.82
SCRIB-207ENST00000531942 SCRIBQ14160 1630 aa44.71■■■■■ 4.75
SCRIB-207ENST00000531942 SHROOM4Q9ULL8 1493 aa44.65■■■■■ 4.74
SCRIB-207ENST00000531942 CC2D2AQ9P2K1 1620 aa44.23■■■■■ 4.67
SCRIB-207ENST00000531942 EIF4G1Q04637 1599 aaKnown RBP44.16■■■■■ 4.66
SCRIB-207ENST00000531942 CECR2Q9BXF3 1484 aa44.1■■■■■ 4.65
SCRIB-207ENST00000531942 NCAPD3P42695 1498 aa42.76■■■■■ 4.44
SCRIB-207ENST00000531942 ATAD2BQ9ULI0 1458 aa42.65■■■■■ 4.42
SCRIB-207ENST00000531942 SMARCA4P51532 1647 aa42.64■■■■■ 4.42
SCRIB-207ENST00000531942 SMARCA2P51531 1590 aa42.54■■■■■ 4.4
SCRIB-207ENST00000531942 HMGXB3Q12766 1538 aa42.46■■■■■ 4.39
SCRIB-207ENST00000531942 BAZ1AQ9NRL2 1556 aaPredicted RBP42.44■■■■■ 4.38
SCRIB-207ENST00000531942 ERCC6Q03468 1493 aa42.29■■■■■ 4.36
SCRIB-207ENST00000531942 BAZ1BQ9UIG0 1483 aaKnown RBP42.25■■■■■ 4.35
SCRIB-207ENST00000531942 PEG3Q9GZU2 1588 aa42.2■■■■■ 4.35
SCRIB-207ENST00000531942 CUX2O14529 1486 aa42.15■■■■■ 4.34
SCRIB-207ENST00000531942 MROH2BQ7Z745 1585 aa42.14■■■■■ 4.34
SCRIB-207ENST00000531942 NESP48681 1621 aa42.09■■■■■ 4.33
SCRIB-207ENST00000531942 DNAJC5Q9H3Z4 198 aa42.04■■■■■ 4.32
SCRIB-207ENST00000531942 LAMC3Q9Y6N6 1575 aa41.8■■■■■ 4.28
SCRIB-207ENST00000531942 WIZO95785 1651 aa41.64■■■■■ 4.26
SCRIB-207ENST00000531942 THOC2Q8NI27 1593 aaKnown RBP41.63■■■■■ 4.26
SCRIB-207ENST00000531942 KIF21AQ7Z4S6 1674 aa41.56■■■■■ 4.24
SCRIB-207ENST00000531942 PDS5BQ9NTI5 1447 aa41.55■■■■■ 4.24
SCRIB-207ENST00000531942 CADPSQ9ULU8 1353 aa41.47■■■■■ 4.23
SCRIB-207ENST00000531942 RSF1Q96T23 1441 aaPredicted RBP41.28■■■■■ 4.2
SCRIB-207ENST00000531942 MRC2Q9UBG0 1479 aa41.19■■■■■ 4.18
SCRIB-207ENST00000531942 TOP2AP11388 1531 aaKnown RBP41.11■■■■■ 4.17
SCRIB-207ENST00000531942 WDR62O43379 1518 aa41.08■■■■■ 4.17
SCRIB-207ENST00000531942 CEP164Q9UPV0 1460 aa41.05■■■■■ 4.16
SCRIB-207ENST00000531942 CFTRP13569 1480 aa41.02■■■■■ 4.16
SCRIB-207ENST00000531942 FANCD2Q9BXW9 1451 aa41.02■■■■■ 4.16
SCRIB-207ENST00000531942 URB2Q14146 1524 aaKnown RBP40.67■■■■■ 4.1
SCRIB-207ENST00000531942 CCDC88BA6NC98 1476 aa40.65■■■■■ 4.1
SCRIB-207ENST00000531942 PRDM2Q13029 1718 aa40.62■■■■■ 4.09
SCRIB-207ENST00000531942 TRIM41Q8WV44 630 aa40.27■■■■■ 4.04
SCRIB-207ENST00000531942 OSCARQ8IYS5 282 aa40.25■■■■■ 4.03
SCRIB-207ENST00000531942 TOPBP1Q92547 1522 aa40.24■■■■■ 4.03
SCRIB-207ENST00000531942 IFT140Q96RY7 1462 aa40.22■■■■■ 4.03
SCRIB-207ENST00000531942 ZNF608Q9ULD9 1512 aaPredicted RBP40.16■■■■■ 4.02
SCRIB-207ENST00000531942 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
SCRIB-207ENST00000531942 DNMBPQ6XZF7 1577 aa40.1■■■■■ 4.01
SCRIB-207ENST00000531942 EIF4G3O43432 1585 aaKnown RBP39.95■■■■□ 3.99
SCRIB-207ENST00000531942 TARBP1Q13395 1621 aaKnown RBP39.89■■■■□ 3.98
SCRIB-207ENST00000531942 POLA1P09884 1462 aaPredicted RBP39.84■■■■□ 3.97
SCRIB-207ENST00000531942 AQRO60306 1485 aaKnown RBP eCLIP39.81■■■■□ 3.968e-11■■■□□ 18.9
SCRIB-207ENST00000531942 RIMBP3CA6NJZ7 1639 aa39.73■■■■□ 3.95
SCRIB-207ENST00000531942 RIMBP3BA6NNM3 1639 aa39.73■■■■□ 3.95
SCRIB-207ENST00000531942 RIMBP3Q9UFD9 1639 aa39.73■■■■□ 3.95
SCRIB-207ENST00000531942 RAD54L2Q9Y4B4 1467 aa39.7■■■■□ 3.95
SCRIB-207ENST00000531942 SOGA1O94964 1423 aa39.66■■■■□ 3.94
SCRIB-207ENST00000531942 CHD1O14646 1710 aa39.64■■■■□ 3.94
SCRIB-207ENST00000531942 ARHGEF11O15085 1522 aa39.61■■■■□ 3.93
SCRIB-207ENST00000531942 FGD5Q6ZNL6 1462 aa39.61■■■■□ 3.93
SCRIB-207ENST00000531942 CUX1P39880 1505 aa39.59■■■■□ 3.93
SCRIB-207ENST00000531942 TDRD9Q8NDG6 1382 aaKnown RBP39.59■■■■□ 3.93
SCRIB-207ENST00000531942 SUPT5HO00267 1087 aaKnown RBP39.56■■■■□ 3.92
SCRIB-207ENST00000531942 FBLN2P98095 1184 aa39.56■■■■□ 3.92
SCRIB-207ENST00000531942 WDR97A6NE52 1622 aa39.46■■■■□ 3.91
SCRIB-207ENST00000531942 SNAPC4Q5SXM2 1469 aa39.41■■■■□ 3.9
SCRIB-207ENST00000531942 CYB5RLQ6IPT4 315 aa39.32■■■■□ 3.89
SCRIB-207ENST00000531942 GRIN2BQ13224 1484 aa39.3■■■■□ 3.88
SCRIB-207ENST00000531942 MAGI1Q96QZ7 1491 aaPredicted RBP39.3■■■■□ 3.88
SCRIB-207ENST00000531942 CHMP7Q8WUX9 453 aaPredicted RBP39.26■■■■□ 3.88
SCRIB-207ENST00000531942 ARAP1Q96P48 1450 aa39.23■■■■□ 3.87
SCRIB-207ENST00000531942 GAPVD1Q14C86 1478 aa39.18■■■■□ 3.86
SCRIB-207ENST00000531942 PBRM1Q86U86 1689 aa39.17■■■■□ 3.86
SCRIB-207ENST00000531942 CLASP1Q7Z460 1538 aa39.17■■■■□ 3.86
SCRIB-207ENST00000531942 SYNJ2O15056 1496 aa39.17■■■■□ 3.86
SCRIB-207ENST00000531942 SYNJ1O43426 1573 aa39.16■■■■□ 3.86
SCRIB-207ENST00000531942 ABCA10Q8WWZ4 1543 aa39.14■■■■□ 3.86
SCRIB-207ENST00000531942 ABCA5Q8WWZ7 1642 aa39.09■■■■□ 3.85
SCRIB-207ENST00000531942 WRNQ14191 1432 aaPredicted RBP eCLIP39.02■■■■□ 3.84
SCRIB-207ENST00000531942 TOP2BQ02880 1626 aa38.97■■■■□ 3.83
SCRIB-207ENST00000531942 BIVM-ERCC5R4GMW8 1640 aa38.97■■■■□ 3.83
SCRIB-207ENST00000531942 TRHP20396 242 aaPredicted RBP38.88■■■■□ 3.81
SCRIB-207ENST00000531942 GRIN2AQ12879 1464 aa38.8■■■■□ 3.8
SCRIB-207ENST00000531942 ADAMTS12P58397 1594 aa38.79■■■■□ 3.8
SCRIB-207ENST00000531942 FHAD1B1AJZ9 1412 aa38.69■■■■□ 3.78
SCRIB-207ENST00000531942 CEP170Q5SW79 1584 aa38.67■■■■□ 3.78
SCRIB-207ENST00000531942 ERICH3Q5RHP9 1530 aa38.66■■■■□ 3.78
SCRIB-207ENST00000531942 NUP160Q12769 1436 aa38.65■■■■□ 3.78
SCRIB-207ENST00000531942 ERCC6L2Q5T890 1561 aa38.59■■■■□ 3.77
SCRIB-207ENST00000531942 SHROOM2Q13796 1616 aa38.49■■■■□ 3.75
SCRIB-207ENST00000531942 PRG4Q92954 1404 aaPredicted RBP38.3■■■■□ 3.72
SCRIB-207ENST00000531942 JPH4Q96JJ6 628 aa38.27■■■■□ 3.72
SCRIB-207ENST00000531942 RUSC2Q8N2Y8 1516 aa38.25■■■■□ 3.71
SCRIB-207ENST00000531942 KIF27Q86VH2 1401 aa38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 246.1 ms