RNA–Protein interactions for RNA: ENST00000602040.5

PTOV1-221, Transcript of prostate tumor overexpressed 1, humanhuman

TSL 2

Gene PTOV1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTOV1-221ENST00000602040 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
PTOV1-221ENST00000602040 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
PTOV1-221ENST00000602040 ABCC9O60706 1549 aa28.76■■■□□ 2.19
PTOV1-221ENST00000602040 DCAF8L2P0C7V8 631 aa27.66■■■□□ 2.02
PTOV1-221ENST00000602040 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
PTOV1-221ENST00000602040 NACADO15069 1562 aa27.56■■■□□ 2
PTOV1-221ENST00000602040 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
PTOV1-221ENST00000602040 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
PTOV1-221ENST00000602040 DCAF1Q9Y4B6 1507 aa27.23■■□□□ 1.95
PTOV1-221ENST00000602040 PABPN1Q86U42 306 aaKnown RBP eCLIP26.9■■□□□ 1.9
PTOV1-221ENST00000602040 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
PTOV1-221ENST00000602040 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
PTOV1-221ENST00000602040 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
PTOV1-221ENST00000602040 BICRAQ9NZM4 1560 aa26.72■■□□□ 1.87
PTOV1-221ENST00000602040 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
PTOV1-221ENST00000602040 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
PTOV1-221ENST00000602040 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
PTOV1-221ENST00000602040 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
PTOV1-221ENST00000602040 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
PTOV1-221ENST00000602040 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
PTOV1-221ENST00000602040 ATAD2BQ9ULI0 1458 aa25.46■■□□□ 1.67
PTOV1-221ENST00000602040 NCAPD3P42695 1498 aa25.45■■□□□ 1.66
PTOV1-221ENST00000602040 SMARCA2P51531 1590 aa25.41■■□□□ 1.66
PTOV1-221ENST00000602040 MROH2BQ7Z745 1585 aa25.38■■□□□ 1.65
PTOV1-221ENST00000602040 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
PTOV1-221ENST00000602040 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
PTOV1-221ENST00000602040 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
PTOV1-221ENST00000602040 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
PTOV1-221ENST00000602040 WIZO95785 1651 aa25.07■■□□□ 1.6
PTOV1-221ENST00000602040 NESP48681 1621 aa24.85■■□□□ 1.57
PTOV1-221ENST00000602040 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
PTOV1-221ENST00000602040 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
PTOV1-221ENST00000602040 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
PTOV1-221ENST00000602040 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
PTOV1-221ENST00000602040 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
PTOV1-221ENST00000602040 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
PTOV1-221ENST00000602040 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
PTOV1-221ENST00000602040 CUX2O14529 1486 aa24.54■■□□□ 1.52
PTOV1-221ENST00000602040 CFTRP13569 1480 aa24.54■■□□□ 1.52
PTOV1-221ENST00000602040 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
PTOV1-221ENST00000602040 KIF21AQ7Z4S6 1674 aa24.48■■□□□ 1.51
PTOV1-221ENST00000602040 THOC2Q8NI27 1593 aaKnown RBP24.44■■□□□ 1.5
PTOV1-221ENST00000602040 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
PTOV1-221ENST00000602040 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
PTOV1-221ENST00000602040 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
PTOV1-221ENST00000602040 WDR62O43379 1518 aa24.27■■□□□ 1.48
PTOV1-221ENST00000602040 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
PTOV1-221ENST00000602040 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
PTOV1-221ENST00000602040 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
PTOV1-221ENST00000602040 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
PTOV1-221ENST00000602040 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
PTOV1-221ENST00000602040 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
PTOV1-221ENST00000602040 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
PTOV1-221ENST00000602040 CUX1P39880 1505 aa23.8■■□□□ 1.4
PTOV1-221ENST00000602040 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
PTOV1-221ENST00000602040 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
PTOV1-221ENST00000602040 SOGA1O94964 1423 aa23.76■■□□□ 1.39
PTOV1-221ENST00000602040 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
PTOV1-221ENST00000602040 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
PTOV1-221ENST00000602040 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
PTOV1-221ENST00000602040 AQRO60306 1485 aaKnown RBP eCLIP23.67■■□□□ 1.38
PTOV1-221ENST00000602040 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
PTOV1-221ENST00000602040 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
PTOV1-221ENST00000602040 TOP2BQ02880 1626 aa23.58■■□□□ 1.36
PTOV1-221ENST00000602040 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
PTOV1-221ENST00000602040 OSCARQ8IYS5 282 aa23.56■■□□□ 1.36
PTOV1-221ENST00000602040 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
PTOV1-221ENST00000602040 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
PTOV1-221ENST00000602040 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
PTOV1-221ENST00000602040 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
PTOV1-221ENST00000602040 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
PTOV1-221ENST00000602040 SNAPC4Q5SXM2 1469 aa23.45■■□□□ 1.34
PTOV1-221ENST00000602040 FBLN2P98095 1184 aa23.45■■□□□ 1.34
PTOV1-221ENST00000602040 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
PTOV1-221ENST00000602040 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
PTOV1-221ENST00000602040 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
PTOV1-221ENST00000602040 CHMP7Q8WUX9 453 aaPredicted RBP23.37■■□□□ 1.33
PTOV1-221ENST00000602040 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
PTOV1-221ENST00000602040 CHD1O14646 1710 aa23.32■■□□□ 1.32
PTOV1-221ENST00000602040 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
PTOV1-221ENST00000602040 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
PTOV1-221ENST00000602040 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
PTOV1-221ENST00000602040 KIF27Q86VH2 1401 aa23.2■■□□□ 1.3
PTOV1-221ENST00000602040 ADAMTS12P58397 1594 aa23.19■■□□□ 1.3
PTOV1-221ENST00000602040 GRIN2AQ12879 1464 aa23.16■■□□□ 1.3
PTOV1-221ENST00000602040 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
PTOV1-221ENST00000602040 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
PTOV1-221ENST00000602040 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
PTOV1-221ENST00000602040 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
PTOV1-221ENST00000602040 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
PTOV1-221ENST00000602040 IGF1RP08069 1367 aa23.1■■□□□ 1.29
PTOV1-221ENST00000602040 NUP160Q12769 1436 aa23.05■■□□□ 1.28
PTOV1-221ENST00000602040 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
PTOV1-221ENST00000602040 CUL7Q14999 1698 aa22.99■■□□□ 1.27
PTOV1-221ENST00000602040 CARMIL1Q5VZK9 1371 aa22.98■■□□□ 1.27
PTOV1-221ENST00000602040 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
PTOV1-221ENST00000602040 ARAP1Q96P48 1450 aa22.94■■□□□ 1.26
PTOV1-221ENST00000602040 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
PTOV1-221ENST00000602040 JPH4Q96JJ6 628 aa22.86■■□□□ 1.25
PTOV1-221ENST00000602040 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms