RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
CPSF7-206ENST00000448745 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
CPSF7-206ENST00000448745 ABCC9O60706 1549 aa15.34■□□□□ 0.05
CPSF7-206ENST00000448745 ZCCHC6Q5VYS8 1495 aaKnown RBP15.21■□□□□ 0.03
CPSF7-206ENST00000448745 DCAF1Q9Y4B6 1507 aa15.05■□□□□ -0
CPSF7-206ENST00000448745 MYO15BQ96JP2 1530 aa14.99□□□□□ -0.01
CPSF7-206ENST00000448745 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
CPSF7-206ENST00000448745 NACADO15069 1562 aa14.95□□□□□ -0.02
CPSF7-206ENST00000448745 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
CPSF7-206ENST00000448745 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
CPSF7-206ENST00000448745 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.03
CPSF7-206ENST00000448745 UNC13AQ9UPW8 1703 aa14.62□□□□□ -0.07
CPSF7-206ENST00000448745 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
CPSF7-206ENST00000448745 SHROOM4Q9ULL8 1493 aa14.51□□□□□ -0.09
CPSF7-206ENST00000448745 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
CPSF7-206ENST00000448745 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
CPSF7-206ENST00000448745 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
CPSF7-206ENST00000448745 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
CPSF7-206ENST00000448745 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
CPSF7-206ENST00000448745 EIF4G1Q04637 1599 aaKnown RBP14.04□□□□□ -0.16
CPSF7-206ENST00000448745 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
CPSF7-206ENST00000448745 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-206ENST00000448745 SMARCA4P51532 1647 aa14.03□□□□□ -0.16
CPSF7-206ENST00000448745 HRCP23327 699 aa14□□□□□ -0.17
CPSF7-206ENST00000448745 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
CPSF7-206ENST00000448745 CC2D2AQ9P2K1 1620 aa13.91□□□□□ -0.18
CPSF7-206ENST00000448745 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
CPSF7-206ENST00000448745 WIZO95785 1651 aa13.89□□□□□ -0.19
CPSF7-206ENST00000448745 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
CPSF7-206ENST00000448745 SMARCA2P51531 1590 aa13.83□□□□□ -0.19
CPSF7-206ENST00000448745 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
CPSF7-206ENST00000448745 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
CPSF7-206ENST00000448745 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
CPSF7-206ENST00000448745 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
CPSF7-206ENST00000448745 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
CPSF7-206ENST00000448745 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
CPSF7-206ENST00000448745 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.23
CPSF7-206ENST00000448745 PPARGC1BQ86YN6 1023 aaKnown RBP13.5□□□□□ -0.25
CPSF7-206ENST00000448745 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-206ENST00000448745 CFTRP13569 1480 aa13.42□□□□□ -0.26
CPSF7-206ENST00000448745 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-206ENST00000448745 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
CPSF7-206ENST00000448745 NESP48681 1621 aa13.41□□□□□ -0.26
CPSF7-206ENST00000448745 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
CPSF7-206ENST00000448745 LOC105371045A0A1W2PR82 267 aa13.36□□□□□ -0.27
CPSF7-206ENST00000448745 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
CPSF7-206ENST00000448745 PRDM2Q13029 1718 aa13.34□□□□□ -0.27
CPSF7-206ENST00000448745 FANCD2Q9BXW9 1451 aa13.25□□□□□ -0.29
CPSF7-206ENST00000448745 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
CPSF7-206ENST00000448745 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
CPSF7-206ENST00000448745 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
CPSF7-206ENST00000448745 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
CPSF7-206ENST00000448745 PHF23Q9BUL5 403 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-206ENST00000448745 CUX1P39880 1505 aa13.14□□□□□ -0.31
CPSF7-206ENST00000448745 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
CPSF7-206ENST00000448745 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
CPSF7-206ENST00000448745 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
CPSF7-206ENST00000448745 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
CPSF7-206ENST00000448745 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
CPSF7-206ENST00000448745 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
CPSF7-206ENST00000448745 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
CPSF7-206ENST00000448745 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
CPSF7-206ENST00000448745 TOP2BQ02880 1626 aa13.09□□□□□ -0.31
CPSF7-206ENST00000448745 BIVM-ERCC5R4GMW8 1640 aa13.09□□□□□ -0.31
CPSF7-206ENST00000448745 WDR62O43379 1518 aa13.09□□□□□ -0.31
CPSF7-206ENST00000448745 DNMBPQ6XZF7 1577 aa13.09□□□□□ -0.31
CPSF7-206ENST00000448745 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
CPSF7-206ENST00000448745 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
CPSF7-206ENST00000448745 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
CPSF7-206ENST00000448745 CUX2O14529 1486 aa13□□□□□ -0.33
CPSF7-206ENST00000448745 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.34
CPSF7-206ENST00000448745 RAD54L2Q9Y4B4 1467 aa12.95□□□□□ -0.34
CPSF7-206ENST00000448745 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-206ENST00000448745 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
CPSF7-206ENST00000448745 SOGA1O94964 1423 aa12.92□□□□□ -0.34
CPSF7-206ENST00000448745 ABCA10Q8WWZ4 1543 aa12.91□□□□□ -0.34
CPSF7-206ENST00000448745 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
CPSF7-206ENST00000448745 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
CPSF7-206ENST00000448745 RUSC2Q8N2Y8 1516 aa12.87□□□□□ -0.35
CPSF7-206ENST00000448745 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-206ENST00000448745 MYT1Q01538 1121 aa12.86□□□□□ -0.35
CPSF7-206ENST00000448745 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
CPSF7-206ENST00000448745 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
CPSF7-206ENST00000448745 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-206ENST00000448745 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-206ENST00000448745 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■■■■ 48.1
CPSF7-206ENST00000448745 EIF4G3O43432 1585 aaKnown RBP12.8□□□□□ -0.36
CPSF7-206ENST00000448745 KIF27Q86VH2 1401 aa12.8□□□□□ -0.36
CPSF7-206ENST00000448745 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
CPSF7-206ENST00000448745 IGF1RP08069 1367 aa12.77□□□□□ -0.37
CPSF7-206ENST00000448745 EEA1Q15075 1411 aa12.76□□□□□ -0.37
CPSF7-206ENST00000448745 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
CPSF7-206ENST00000448745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-206ENST00000448745 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
CPSF7-206ENST00000448745 NEUROD1Q13562 356 aa12.74□□□□□ -0.37
CPSF7-206ENST00000448745 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
CPSF7-206ENST00000448745 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
CPSF7-206ENST00000448745 GRIN2BQ13224 1484 aa12.73□□□□□ -0.37
CPSF7-206ENST00000448745 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
CPSF7-206ENST00000448745 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms