RNA–Protein interactions for RNA: ENST00000395774.1

RAI1-202, Transcript of retinoic acid induced 1, humanhuman

TSL 2

Gene RAI1, Length 2,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-202ENST00000395774 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
RAI1-202ENST00000395774 CCDC180Q9P1Z9 1646 aa28.63■■■□□ 2.17
RAI1-202ENST00000395774 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
RAI1-202ENST00000395774 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
RAI1-202ENST00000395774 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
RAI1-202ENST00000395774 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
RAI1-202ENST00000395774 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
RAI1-202ENST00000395774 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
RAI1-202ENST00000395774 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
RAI1-202ENST00000395774 ABCC9O60706 1549 aa26.72■■□□□ 1.87
RAI1-202ENST00000395774 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
RAI1-202ENST00000395774 NACADO15069 1562 aa26.4■■□□□ 1.82
RAI1-202ENST00000395774 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
RAI1-202ENST00000395774 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
RAI1-202ENST00000395774 HRCP23327 699 aa26.01■■□□□ 1.75
RAI1-202ENST00000395774 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
RAI1-202ENST00000395774 CECR2Q9BXF3 1484 aa25.97■■□□□ 1.75
RAI1-202ENST00000395774 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
RAI1-202ENST00000395774 PCGF6Q9BYE7 350 aa25.92■■□□□ 1.74
RAI1-202ENST00000395774 WIZO95785 1651 aa25.81■■□□□ 1.72
RAI1-202ENST00000395774 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
RAI1-202ENST00000395774 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
RAI1-202ENST00000395774 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
RAI1-202ENST00000395774 TRIM26Q12899 539 aaPredicted RBP25.58■■□□□ 1.69
RAI1-202ENST00000395774 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
RAI1-202ENST00000395774 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
RAI1-202ENST00000395774 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
RAI1-202ENST00000395774 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
RAI1-202ENST00000395774 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
RAI1-202ENST00000395774 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
RAI1-202ENST00000395774 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
RAI1-202ENST00000395774 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
RAI1-202ENST00000395774 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
RAI1-202ENST00000395774 EHMT2Q96KQ7 1210 aa25.12■■□□□ 1.61
RAI1-202ENST00000395774 PEG3Q9GZU2 1588 aa25.09■■□□□ 1.61
RAI1-202ENST00000395774 ZEB1P37275 1124 aaPredicted RBP25.07■■□□□ 1.6
RAI1-202ENST00000395774 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
RAI1-202ENST00000395774 EEA1Q15075 1411 aa24.92■■□□□ 1.58
RAI1-202ENST00000395774 SOGA1O94964 1423 aa24.86■■□□□ 1.57
RAI1-202ENST00000395774 WRNQ14191 1432 aaPredicted RBP eCLIP24.84■■□□□ 1.57
RAI1-202ENST00000395774 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
RAI1-202ENST00000395774 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
RAI1-202ENST00000395774 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
RAI1-202ENST00000395774 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
RAI1-202ENST00000395774 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
RAI1-202ENST00000395774 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
RAI1-202ENST00000395774 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
RAI1-202ENST00000395774 GOLGA3Q08378 1498 aa24.68■■□□□ 1.54
RAI1-202ENST00000395774 KIF21BO75037 1637 aa24.6■■□□□ 1.53
RAI1-202ENST00000395774 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
RAI1-202ENST00000395774 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
RAI1-202ENST00000395774 TOP2BQ02880 1626 aa24.45■■□□□ 1.51
RAI1-202ENST00000395774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.44■■□□□ 1.5
RAI1-202ENST00000395774 HMGXB3Q12766 1538 aa24.43■■□□□ 1.5
RAI1-202ENST00000395774 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
RAI1-202ENST00000395774 CCER1Q8TC90 406 aaPredicted RBP24.42■■□□□ 1.5
RAI1-202ENST00000395774 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
RAI1-202ENST00000395774 CLIP1P30622 1438 aa24.33■■□□□ 1.49
RAI1-202ENST00000395774 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.49
RAI1-202ENST00000395774 RAPGEF2Q9Y4G8 1499 aa24.3■■□□□ 1.48
RAI1-202ENST00000395774 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
RAI1-202ENST00000395774 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
RAI1-202ENST00000395774 CUX1P39880 1505 aa24.17■■□□□ 1.46
RAI1-202ENST00000395774 PRXQ9BXM0 1461 aa24.15■■□□□ 1.46
RAI1-202ENST00000395774 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
RAI1-202ENST00000395774 CFTRP13569 1480 aa24.14■■□□□ 1.46
RAI1-202ENST00000395774 APLP2Q06481 763 aa24.04■■□□□ 1.44
RAI1-202ENST00000395774 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
RAI1-202ENST00000395774 ARAP1Q96P48 1450 aa23.99■■□□□ 1.43
RAI1-202ENST00000395774 HNRNPUL2Q1KMD3 747 aaKnown RBP23.93■■□□□ 1.42
RAI1-202ENST00000395774 DIEXFQ68CQ4 756 aaKnown RBP23.93■■□□□ 1.42
RAI1-202ENST00000395774 RANGAP1P46060 587 aaPredicted RBP23.92■■□□□ 1.42
RAI1-202ENST00000395774 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
RAI1-202ENST00000395774 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
RAI1-202ENST00000395774 ZNF316A6NFI3 1004 aaPredicted RBP23.82■■□□□ 1.4
RAI1-202ENST00000395774 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
RAI1-202ENST00000395774 CUX2O14529 1486 aa23.78■■□□□ 1.4
RAI1-202ENST00000395774 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
RAI1-202ENST00000395774 IGF1RP08069 1367 aa23.73■■□□□ 1.39
RAI1-202ENST00000395774 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
RAI1-202ENST00000395774 ACIN1Q9UKV3 1341 aaKnown RBP23.72■■□□□ 1.39
RAI1-202ENST00000395774 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
RAI1-202ENST00000395774 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
RAI1-202ENST00000395774 CLSPNQ9HAW4 1339 aa23.67■■□□□ 1.38
RAI1-202ENST00000395774 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
RAI1-202ENST00000395774 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
RAI1-202ENST00000395774 CENPBP07199 599 aaPredicted RBP23.62■■□□□ 1.37
RAI1-202ENST00000395774 MAP3K1Q13233 1512 aa23.62■■□□□ 1.37
RAI1-202ENST00000395774 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
RAI1-202ENST00000395774 DHX57Q6P158 1386 aaKnown RBP23.61■■□□□ 1.37
RAI1-202ENST00000395774 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
RAI1-202ENST00000395774 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
RAI1-202ENST00000395774 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
RAI1-202ENST00000395774 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
RAI1-202ENST00000395774 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
RAI1-202ENST00000395774 CFAP43Q8NDM7 1665 aa23.48■■□□□ 1.35
RAI1-202ENST00000395774 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
RAI1-202ENST00000395774 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
RAI1-202ENST00000395774 CUL7Q14999 1698 aa23.45■■□□□ 1.34
RAI1-202ENST00000395774 LRRC9Q6ZRR7 1453 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms