Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.521e-10■■■□□ 16.5
DROSHAQ9NRR4 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.515e-20■■■□□ 16.5
DROSHAQ9NRR4 LZTR1-203ENST00000415354 648 ntTSL 318.13■□□□□ 0.493e-8■■■□□ 16.5
DROSHAQ9NRR4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.487e-6■■■□□ 16.5
DROSHAQ9NRR4 AGO2-204ENST00000519347 309 ntTSL 317.79■□□□□ 0.447e-6■■■□□ 16.5
DROSHAQ9NRR4 AHSA1-205ENST00000555133 1048 ntTSL 317.59■□□□□ 0.417e-6■■■□□ 16.5
DROSHAQ9NRR4 PHF19-205ENST00000439674 556 ntTSL 417.44■□□□□ 0.387e-6■■■□□ 16.5
DROSHAQ9NRR4 AGO2-206ENST00000520412 614 ntTSL 216.9■□□□□ 0.37e-6■■■□□ 16.5
DROSHAQ9NRR4 LZTR1-209ENST00000463909 3505 ntTSL 1 (best)16.72■□□□□ 0.273e-8■■■□□ 16.5
DROSHAQ9NRR4 HMBS-217ENST00000543543 1796 ntTSL 516.62■□□□□ 0.251e-10■■■□□ 16.5
DROSHAQ9NRR4 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.227e-6■■■□□ 16.5
DROSHAQ9NRR4 SOD2-203ENST00000367055 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.187e-6■■■□□ 16.5
DROSHAQ9NRR4 MRPS21-202ENST00000614145 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.147e-6■■■□□ 16.5
DROSHAQ9NRR4 SOD2-210ENST00000537657 507 ntTSL 215.9■□□□□ 0.147e-6■■■□□ 16.5
DROSHAQ9NRR4 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.137e-6■■■□□ 16.5
DROSHAQ9NRR4 RPARP-AS1-203ENST00000494270 711 ntTSL 2 BASIC15.15■□□□□ 0.027e-6■■■□□ 16.5
DROSHAQ9NRR4 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.037e-6■■■□□ 16.5
DROSHAQ9NRR4 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.047e-6■■■□□ 16.5
DROSHAQ9NRR4 EHMT1-232ENST00000636463 100 ntTSL 514.79□□□□□ -0.047e-6■■■□□ 16.5
DROSHAQ9NRR4 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.147e-6■■■□□ 16.5
DROSHAQ9NRR4 HMBS-206ENST00000535793 832 ntTSL 513.65□□□□□ -0.221e-10■■■□□ 16.5
DROSHAQ9NRR4 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.281e-10■■■□□ 16.5
DROSHAQ9NRR4 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.293e-8■■■□□ 16.5
DROSHAQ9NRR4 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC12.61□□□□□ -0.397e-6■■■□□ 16.5
DROSHAQ9NRR4 SOD2-216ENST00000546260 4302 ntTSL 512.48□□□□□ -0.417e-6■■■□□ 16.5
DROSHAQ9NRR4 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.517e-6■■■□□ 16.5
DROSHAQ9NRR4 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.555e-20■■■□□ 16.5
DROSHAQ9NRR4 HMBS-213ENST00000542345 882 ntTSL 311.25□□□□□ -0.611e-10■■■□□ 16.5
DROSHAQ9NRR4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC11.24□□□□□ -0.617e-6■■■□□ 16.5
DROSHAQ9NRR4 MFAP3-204ENST00000519325 944 ntTSL 310.88□□□□□ -0.677e-6■■■□□ 16.5
DROSHAQ9NRR4 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.877e-6■■■□□ 16.5
DROSHAQ9NRR4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC9.54□□□□□ -0.887e-6■■■□□ 16.5
DROSHAQ9NRR4 RNU1-136P-201ENST00000384181 164 ntBASIC8.6□□□□□ -1.037e-6■■■□□ 16.5
DROSHAQ9NRR4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.047e-6■■■□□ 16.5
DROSHAQ9NRR4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC8.56□□□□□ -1.041e-10■■■□□ 16.5
DROSHAQ9NRR4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.047e-6■■■□□ 16.5
DROSHAQ9NRR4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.087e-6■■■□□ 16.5
DROSHAQ9NRR4 SYNGAP1-218ENST00000636905 123 ntTSL 58.29□□□□□ -1.087e-6■■■□□ 16.5
DROSHAQ9NRR4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.17e-6■■■□□ 16.5
DROSHAQ9NRR4 TRPC1-202ENST00000460401 397 ntTSL 37.99□□□□□ -1.137e-6■■■□□ 16.5
DROSHAQ9NRR4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.167e-6■■■□□ 16.5
DROSHAQ9NRR4 OTUD4-209ENST00000509985 467 ntTSL 44.39□□□□□ -1.711e-10■■■□□ 16.5
DROSHAQ9NRR4 OTUD4-210ENST00000514973 1255 ntTSL 53.76□□□□□ -1.811e-10■■■□□ 16.5
DROSHAQ9NRR4 OTUD4-203ENST00000455611 2498 ntTSL 52.68□□□□□ -1.981e-10■■■□□ 16.5
DROSHAQ9NRR4 AP2A2-205ENST00000525796 551 ntTSL 530.89■■■□□ 2.543e-7■■■□□ 16.5
DROSHAQ9NRR4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.012e-7■■■□□ 16.4
DROSHAQ9NRR4 ALDOC-209ENST00000584086 686 ntTSL 322.27■■□□□ 1.162e-7■■■□□ 16.4
DROSHAQ9NRR4 ALDOC-208ENST00000582381 571 ntTSL 220.17■□□□□ 0.822e-7■■■□□ 16.4
DROSHAQ9NRR4 ALDOC-207ENST00000581807 580 ntTSL 319.5■□□□□ 0.712e-7■■■□□ 16.4
DROSHAQ9NRR4 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC18.74■□□□□ 0.592e-7■■■□□ 16.4
DROSHAQ9NRR4 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.442e-7■■■□□ 16.4
DROSHAQ9NRR4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC27.82■■■□□ 2.043e-7■■■□□ 16.4
DROSHAQ9NRR4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC22.66■■□□□ 1.223e-7■■■□□ 16.4
DROSHAQ9NRR4 PTBP1-210ENST00000586944 4661 ntTSL 221.89■■□□□ 1.093e-7■■■□□ 16.4
DROSHAQ9NRR4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.043e-7■■■□□ 16.4
DROSHAQ9NRR4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.923e-7■■■□□ 16.4
DROSHAQ9NRR4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC19.72■□□□□ 0.753e-7■■■□□ 16.4
DROSHAQ9NRR4 PTBP1-213ENST00000587191 357 ntTSL 517.78■□□□□ 0.443e-7■■■□□ 16.4
DROSHAQ9NRR4 TCF25-206ENST00000562193 627 ntTSL 317.96■□□□□ 0.474e-8■■■□□ 16.4
DROSHAQ9NRR4 CXXC5-214ENST00000512816 558 ntTSL 325.54■■□□□ 1.682e-6■■■□□ 16.4
DROSHAQ9NRR4 MSH6-206ENST00000455383 578 ntTSL 529.79■■■□□ 2.364e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-207ENST00000456246 846 ntTSL 327.45■■□□□ 1.984e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-208ENST00000493177 813 ntTSL 320.29■□□□□ 0.844e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC17.4■□□□□ 0.384e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC16.94■□□□□ 0.34e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC16.8■□□□□ 0.284e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC16.65■□□□□ 0.264e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-204ENST00000445503 4158 ntTSL 1 (best)15.93■□□□□ 0.144e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.484e-9■■■□□ 16.4
DROSHAQ9NRR4 MSH6-211ENST00000606499 833 ntTSL 311.76□□□□□ -0.534e-9■■■□□ 16.4
DROSHAQ9NRR4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC21.42■■□□□ 1.022e-7■■■□□ 16.4
DROSHAQ9NRR4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.793e-9■■■□□ 16.4
DROSHAQ9NRR4 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.643e-9■■■□□ 16.4
DROSHAQ9NRR4 HBP1-209ENST00000478930 563 ntTSL 49.25□□□□□ -0.933e-9■■■□□ 16.4
DROSHAQ9NRR4 HBP1-205ENST00000464009 478 ntTSL 53.57□□□□□ -1.843e-9■■■□□ 16.4
DROSHAQ9NRR4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.922e-13■■■□□ 16.4
DROSHAQ9NRR4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC33.52■■■□□ 2.962e-10■■■□□ 16.4
DROSHAQ9NRR4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.573e-10■■■□□ 16.3
DROSHAQ9NRR4 FBXO31-208ENST00000636077 660 ntTSL 533.84■■■■□ 3.014e-7■■■□□ 16.3
DROSHAQ9NRR4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC30.63■■■□□ 2.494e-7■■■□□ 16.3
DROSHAQ9NRR4 FBXO31-204ENST00000565593 2717 ntTSL 527.56■■■□□ 24e-7■■■□□ 16.3
DROSHAQ9NRR4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.214e-7■■■□□ 16.3
DROSHAQ9NRR4 RAB35-206ENST00000544304 2449 ntTSL 230.8■■■□□ 2.524e-6■■■□□ 16.3
DROSHAQ9NRR4 RAB35-204ENST00000540803 551 ntTSL 229.42■■■□□ 2.34e-6■■■□□ 16.3
DROSHAQ9NRR4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC24.29■■□□□ 1.484e-6■■■□□ 16.3
DROSHAQ9NRR4 BAIAP2-206ENST00000570913 559 ntTSL 423.45■■□□□ 1.344e-6■■■□□ 16.3
DROSHAQ9NRR4 RAB35-203ENST00000538903 643 ntTSL 322.8■■□□□ 1.244e-6■■■□□ 16.3
DROSHAQ9NRR4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.24e-6■■■□□ 16.3
DROSHAQ9NRR4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.74e-6■■■□□ 16.3
DROSHAQ9NRR4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.364e-6■■■□□ 16.3
DROSHAQ9NRR4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.824e-6■■■□□ 16.3
DROSHAQ9NRR4 GPSM2-203ENST00000435475 992 ntTSL 332.75■■■□□ 2.837e-7■■■□□ 16.3
DROSHAQ9NRR4 GPSM2-204ENST00000435987 904 ntTSL 332.1■■■□□ 2.737e-7■■■□□ 16.3
DROSHAQ9NRR4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.657e-7■■■□□ 16.3
DROSHAQ9NRR4 SUN1-218ENST00000450881 513 ntTSL 422.44■■□□□ 1.186e-8■■■□□ 16.3
DROSHAQ9NRR4 SUN1-201ENST00000340926 2128 ntTSL 520.03■□□□□ 0.86e-8■■■□□ 16.3
DROSHAQ9NRR4 SUN1-234ENST00000493681 526 ntTSL 319.13■□□□□ 0.656e-8■■■□□ 16.3
DROSHAQ9NRR4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.037e-7■■■□□ 16.3
DROSHAQ9NRR4 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.126e-8■■■□□ 16.3
DROSHAQ9NRR4 SUN1-206ENST00000413171 4488 ntTSL 513.93□□□□□ -0.186e-8■■■□□ 16.3
Retrieved 100 of 16,331 protein–RNA pairs in 70.7 ms