RNA–Protein interactions for RNA: ENST00000308660.5

MARCH3-201, Transcript of membrane associated ring-CH-type finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MARCH3, Length 4,196 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH3-201ENST00000308660 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
MARCH3-201ENST00000308660 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
MARCH3-201ENST00000308660 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
MARCH3-201ENST00000308660 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
MARCH3-201ENST00000308660 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
MARCH3-201ENST00000308660 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
MARCH3-201ENST00000308660 FAM9AQ8IZU1 332 aaPredicted RBP20.92■□□□□ 0.94
MARCH3-201ENST00000308660 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
MARCH3-201ENST00000308660 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
MARCH3-201ENST00000308660 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
MARCH3-201ENST00000308660 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
MARCH3-201ENST00000308660 HRCP23327 699 aa20.37■□□□□ 0.85
MARCH3-201ENST00000308660 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
MARCH3-201ENST00000308660 CCER1Q8TC90 406 aaPredicted RBP20.17■□□□□ 0.82
MARCH3-201ENST00000308660 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
MARCH3-201ENST00000308660 TRIM26Q12899 539 aaPredicted RBP20.1■□□□□ 0.81
MARCH3-201ENST00000308660 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
MARCH3-201ENST00000308660 APLP2Q06481 763 aa20.09■□□□□ 0.81
MARCH3-201ENST00000308660 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
MARCH3-201ENST00000308660 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
MARCH3-201ENST00000308660 CENPBP07199 599 aaPredicted RBP19.84■□□□□ 0.77
MARCH3-201ENST00000308660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
MARCH3-201ENST00000308660 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
MARCH3-201ENST00000308660 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.72
MARCH3-201ENST00000308660 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
MARCH3-201ENST00000308660 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
MARCH3-201ENST00000308660 ITGAEP38570 1179 aa19.41■□□□□ 0.7
MARCH3-201ENST00000308660 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
MARCH3-201ENST00000308660 DIEXFQ68CQ4 756 aaKnown RBP19.37■□□□□ 0.69
MARCH3-201ENST00000308660 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
MARCH3-201ENST00000308660 ABCC9O60706 1549 aa19.29■□□□□ 0.68
MARCH3-201ENST00000308660 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
MARCH3-201ENST00000308660 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
MARCH3-201ENST00000308660 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
MARCH3-201ENST00000308660 NEFLP07196 543 aa19.06■□□□□ 0.64
MARCH3-201ENST00000308660 ERICH6Q7L0X2 663 aa19■□□□□ 0.63
MARCH3-201ENST00000308660 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
MARCH3-201ENST00000308660 SCRIBQ14160 1630 aa18.94■□□□□ 0.62
MARCH3-201ENST00000308660 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
MARCH3-201ENST00000308660 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
MARCH3-201ENST00000308660 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
MARCH3-201ENST00000308660 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
MARCH3-201ENST00000308660 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
MARCH3-201ENST00000308660 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
MARCH3-201ENST00000308660 MYT1Q01538 1121 aa18.81■□□□□ 0.6
MARCH3-201ENST00000308660 POLR3GLQ9BT43 218 aa18.81■□□□□ 0.6
MARCH3-201ENST00000308660 BCANQ96GW7 911 aa18.81■□□□□ 0.6
MARCH3-201ENST00000308660 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
MARCH3-201ENST00000308660 P3H3Q8IVL6 736 aa18.65■□□□□ 0.58
MARCH3-201ENST00000308660 MIER1Q8N108 512 aa18.57■□□□□ 0.56
MARCH3-201ENST00000308660 TRIM52Q96A61 297 aa18.52■□□□□ 0.55
MARCH3-201ENST00000308660 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
MARCH3-201ENST00000308660 ANP32CO43423 234 aa18.44■□□□□ 0.54
MARCH3-201ENST00000308660 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
MARCH3-201ENST00000308660 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
MARCH3-201ENST00000308660 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
MARCH3-201ENST00000308660 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
MARCH3-201ENST00000308660 NACADO15069 1562 aa18.4■□□□□ 0.54
MARCH3-201ENST00000308660 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
MARCH3-201ENST00000308660 HIRIP3Q9BW71 556 aaPredicted RBP18.37■□□□□ 0.53
MARCH3-201ENST00000308660 FKBP8Q14318 412 aa18.33■□□□□ 0.52
MARCH3-201ENST00000308660 CLIP1P30622 1438 aa18.32■□□□□ 0.52
MARCH3-201ENST00000308660 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
MARCH3-201ENST00000308660 SOGA1O94964 1423 aa18.22■□□□□ 0.51
MARCH3-201ENST00000308660 TNIKQ9UKE5 1360 aa18.19■□□□□ 0.5
MARCH3-201ENST00000308660 CDK11AQ9UQ88 783 aaPredicted RBP18.18■□□□□ 0.5
MARCH3-201ENST00000308660 HNRNPUQ00839 825 aaKnown RBP eCLIP18.16■□□□□ 0.5
MARCH3-201ENST00000308660 GOLGA3Q08378 1498 aa18.15■□□□□ 0.5
MARCH3-201ENST00000308660 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
MARCH3-201ENST00000308660 CHIC2Q9UKJ5 165 aa18.14■□□□□ 0.49
MARCH3-201ENST00000308660 MROH2BQ7Z745 1585 aa18.14■□□□□ 0.49
MARCH3-201ENST00000308660 DAXXQ9UER7 740 aaPredicted RBP18.14■□□□□ 0.49
MARCH3-201ENST00000308660 FBLN2P98095 1184 aa18.13■□□□□ 0.49
MARCH3-201ENST00000308660 TONSLQ96HA7 1378 aa18.12■□□□□ 0.49
MARCH3-201ENST00000308660 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
MARCH3-201ENST00000308660 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.49
MARCH3-201ENST00000308660 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
MARCH3-201ENST00000308660 ZNF777Q9ULD5 760 aaPredicted RBP18.07■□□□□ 0.48
MARCH3-201ENST00000308660 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
MARCH3-201ENST00000308660 EEA1Q15075 1411 aa18.07■□□□□ 0.48
MARCH3-201ENST00000308660 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
MARCH3-201ENST00000308660 RTL5Q5HYW3 569 aaPredicted RBP18.05■□□□□ 0.48
MARCH3-201ENST00000308660 SIN3AQ96ST3 1273 aa18.03■□□□□ 0.48
MARCH3-201ENST00000308660 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
MARCH3-201ENST00000308660 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
MARCH3-201ENST00000308660 SALL2Q9Y467 1007 aaPredicted RBP17.97■□□□□ 0.47
MARCH3-201ENST00000308660 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
MARCH3-201ENST00000308660 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
MARCH3-201ENST00000308660 RRP7BPQ9NSQ0 103 aa17.94■□□□□ 0.46
MARCH3-201ENST00000308660 KANK4Q5T7N3 995 aaPredicted RBP17.94■□□□□ 0.46
MARCH3-201ENST00000308660 WIZO95785 1651 aa17.91■□□□□ 0.46
MARCH3-201ENST00000308660 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
MARCH3-201ENST00000308660 MTUS2Q5JR59 1369 aa17.9■□□□□ 0.46
MARCH3-201ENST00000308660 SUPT16HQ9Y5B9 1047 aaKnown RBP17.9■□□□□ 0.46
MARCH3-201ENST00000308660 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
MARCH3-201ENST00000308660 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
MARCH3-201ENST00000308660 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
MARCH3-201ENST00000308660 VPS8Q8N3P4 1428 aa17.8■□□□□ 0.44
MARCH3-201ENST00000308660 KIF27Q86VH2 1401 aa17.79■□□□□ 0.44
MARCH3-201ENST00000308660 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms