RNA–Protein interactions for RNA: ENST00000454497.6

OTUD4-202, Transcript of OTU deubiquitinase 4, humanhuman

TSL 2 BASIC

Gene OTUD4, Length 7,069 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-202ENST00000454497 NISCHQ9Y2I1 1504 aa12.17□□□□□ -0.46
OTUD4-202ENST00000454497 CCDC180Q9P1Z9 1646 aa10.52□□□□□ -0.73
OTUD4-202ENST00000454497 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
OTUD4-202ENST00000454497 MYO15BQ96JP2 1530 aa10.34□□□□□ -0.75
OTUD4-202ENST00000454497 ZCCHC6Q5VYS8 1495 aaKnown RBP10.27□□□□□ -0.77
OTUD4-202ENST00000454497 NACADO15069 1562 aa9.92□□□□□ -0.82
OTUD4-202ENST00000454497 SHROOM4Q9ULL8 1493 aa9.8□□□□□ -0.84
OTUD4-202ENST00000454497 RB1CC1Q8TDY2 1594 aa9.71□□□□□ -0.85
OTUD4-202ENST00000454497 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
OTUD4-202ENST00000454497 ABCC9O60706 1549 aa9.62□□□□□ -0.87
OTUD4-202ENST00000454497 BAZ1AQ9NRL2 1556 aaPredicted RBP9.49□□□□□ -0.89
OTUD4-202ENST00000454497 RSF1Q96T23 1441 aaPredicted RBP9.48□□□□□ -0.89
OTUD4-202ENST00000454497 SUPT5HO00267 1087 aaKnown RBP9.43□□□□□ -0.9
OTUD4-202ENST00000454497 SCRIBQ14160 1630 aa9.37□□□□□ -0.91
OTUD4-202ENST00000454497 CHIC1Q5VXU3 224 aa9.31□□□□□ -0.92
OTUD4-202ENST00000454497 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
OTUD4-202ENST00000454497 EEA1Q15075 1411 aa9.28□□□□□ -0.92
OTUD4-202ENST00000454497 NCAPD3P42695 1498 aa9.25□□□□□ -0.93
OTUD4-202ENST00000454497 SMARCA2P51531 1590 aa9.25□□□□□ -0.93
OTUD4-202ENST00000454497 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
OTUD4-202ENST00000454497 TOP2AP11388 1531 aaKnown RBP9.2□□□□□ -0.94
OTUD4-202ENST00000454497 MROH2BQ7Z745 1585 aa9.2□□□□□ -0.94
OTUD4-202ENST00000454497 HMGXB3Q12766 1538 aa9.17□□□□□ -0.94
OTUD4-202ENST00000454497 ATAD2BQ9ULI0 1458 aa9.17□□□□□ -0.94
OTUD4-202ENST00000454497 BICRAQ9NZM4 1560 aa9.16□□□□□ -0.94
OTUD4-202ENST00000454497 SMARCA4P51532 1647 aa9.15□□□□□ -0.94
OTUD4-202ENST00000454497 TRIM41Q8WV44 630 aa9.1□□□□□ -0.95
OTUD4-202ENST00000454497 BAZ1BQ9UIG0 1483 aaKnown RBP9.1□□□□□ -0.95
OTUD4-202ENST00000454497 WRNQ14191 1432 aaPredicted RBP eCLIP9.01□□□□□ -0.97
OTUD4-202ENST00000454497 PABPN1Q86U42 306 aaKnown RBP eCLIP9□□□□□ -0.97
OTUD4-202ENST00000454497 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
OTUD4-202ENST00000454497 CFTRP13569 1480 aa8.98□□□□□ -0.97
OTUD4-202ENST00000454497 CADPSQ9ULU8 1353 aa8.98□□□□□ -0.97
OTUD4-202ENST00000454497 EIF4G1Q04637 1599 aaKnown RBP8.97□□□□□ -0.97
OTUD4-202ENST00000454497 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
OTUD4-202ENST00000454497 CSRNP3Q8WYN3 585 aa8.95□□□□□ -0.98
OTUD4-202ENST00000454497 TNIKQ9UKE5 1360 aa8.91□□□□□ -0.98
OTUD4-202ENST00000454497 CEP164Q9UPV0 1460 aa8.88□□□□□ -0.99
OTUD4-202ENST00000454497 WIZO95785 1651 aa8.86□□□□□ -0.99
OTUD4-202ENST00000454497 KIF27Q86VH2 1401 aa8.86□□□□□ -0.99
OTUD4-202ENST00000454497 PDS5BQ9NTI5 1447 aa8.86□□□□□ -0.99
OTUD4-202ENST00000454497 GOLGA3Q08378 1498 aa8.83□□□□□ -1
OTUD4-202ENST00000454497 ERICH3Q5RHP9 1530 aa8.78□□□□□ -1
OTUD4-202ENST00000454497 ZEB1P37275 1124 aaPredicted RBP8.77□□□□□ -1.01
OTUD4-202ENST00000454497 PRXQ9BXM0 1461 aa8.77□□□□□ -1.01
OTUD4-202ENST00000454497 ACIN1Q9UKV3 1341 aaKnown RBP8.77□□□□□ -1.01
OTUD4-202ENST00000454497 TOP2BQ02880 1626 aa8.74□□□□□ -1.01
OTUD4-202ENST00000454497 LAMC3Q9Y6N6 1575 aa8.74□□□□□ -1.01
OTUD4-202ENST00000454497 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
OTUD4-202ENST00000454497 UNC13AQ9UPW8 1703 aa8.73□□□□□ -1.01
OTUD4-202ENST00000454497 KIF21BO75037 1637 aa8.69□□□□□ -1.02
OTUD4-202ENST00000454497 ABCA10Q8WWZ4 1543 aa8.69□□□□□ -1.02
OTUD4-202ENST00000454497 FANCD2Q9BXW9 1451 aa8.68□□□□□ -1.02
OTUD4-202ENST00000454497 APLP2Q06481 763 aa8.68□□□□□ -1.02
OTUD4-202ENST00000454497 VPS8Q8N3P4 1428 aa8.68□□□□□ -1.02
OTUD4-202ENST00000454497 CLIP1P30622 1438 aa8.68□□□□□ -1.02
OTUD4-202ENST00000454497 FAM9AQ8IZU1 332 aaPredicted RBP8.68□□□□□ -1.02
OTUD4-202ENST00000454497 CEP162Q5TB80 1403 aa8.67□□□□□ -1.02
OTUD4-202ENST00000454497 FHAD1B1AJZ9 1412 aa8.65□□□□□ -1.02
OTUD4-202ENST00000454497 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
OTUD4-202ENST00000454497 BIVM-ERCC5R4GMW8 1640 aa8.65□□□□□ -1.03
OTUD4-202ENST00000454497 IGF1RP08069 1367 aa8.64□□□□□ -1.03
OTUD4-202ENST00000454497 DNMBPQ6XZF7 1577 aa8.64□□□□□ -1.03
OTUD4-202ENST00000454497 SOGA1O94964 1423 aa8.64□□□□□ -1.03
OTUD4-202ENST00000454497 CLSPNQ9HAW4 1339 aa8.63□□□□□ -1.03
OTUD4-202ENST00000454497 WDR97A6NE52 1622 aa8.63□□□□□ -1.03
OTUD4-202ENST00000454497 CC2D2AQ9P2K1 1620 aa8.63□□□□□ -1.03
OTUD4-202ENST00000454497 MAP3K1Q13233 1512 aa8.63□□□□□ -1.03
OTUD4-202ENST00000454497 RAPGEF2Q9Y4G8 1499 aa8.63□□□□□ -1.03
OTUD4-202ENST00000454497 CARMIL1Q5VZK9 1371 aa8.63□□□□□ -1.03
OTUD4-202ENST00000454497 CUX2O14529 1486 aa8.61□□□□□ -1.03
OTUD4-202ENST00000454497 TOPBP1Q92547 1522 aa8.6□□□□□ -1.03
OTUD4-202ENST00000454497 SYNJ1O43426 1573 aa8.6□□□□□ -1.03
OTUD4-202ENST00000454497 FGD5Q6ZNL6 1462 aa8.58□□□□□ -1.04
OTUD4-202ENST00000454497 CUX1P39880 1505 aa8.58□□□□□ -1.04
OTUD4-202ENST00000454497 LOC105371045A0A1W2PR82 267 aa8.58□□□□□ -1.04
OTUD4-202ENST00000454497 IFT140Q96RY7 1462 aa8.58□□□□□ -1.04
OTUD4-202ENST00000454497 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
OTUD4-202ENST00000454497 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
OTUD4-202ENST00000454497 EFCAB5A4FU69 1503 aa8.57□□□□□ -1.04
OTUD4-202ENST00000454497 AQRO60306 1485 aaKnown RBP eCLIP8.56□□□□□ -1.041e-6■■□□□ 14.5
OTUD4-202ENST00000454497 HRCP23327 699 aa8.56□□□□□ -1.04
OTUD4-202ENST00000454497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.56□□□□□ -1.041e-10■■■□□ 16.5
OTUD4-202ENST00000454497 MRC2Q9UBG0 1479 aa8.55□□□□□ -1.04
OTUD4-202ENST00000454497 GRIN2BQ13224 1484 aa8.52□□□□□ -1.05
OTUD4-202ENST00000454497 TIMELESSQ9UNS1 1208 aa8.5□□□□□ -1.05
OTUD4-202ENST00000454497 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
OTUD4-202ENST00000454497 CDK11AQ9UQ88 783 aaPredicted RBP8.47□□□□□ -1.05
OTUD4-202ENST00000454497 MAGI1Q96QZ7 1491 aaPredicted RBP8.47□□□□□ -1.05
OTUD4-202ENST00000454497 KIAA0586Q9BVV6 1533 aa8.47□□□□□ -1.05
OTUD4-202ENST00000454497 CUL7Q14999 1698 aa8.45□□□□□ -1.06
OTUD4-202ENST00000454497 URB2Q14146 1524 aaKnown RBP8.45□□□□□ -1.06
OTUD4-202ENST00000454497 CASKIN1Q8WXD9 1431 aa8.44□□□□□ -1.06
OTUD4-202ENST00000454497 THOC2Q8NI27 1593 aaKnown RBP8.44□□□□□ -1.06
OTUD4-202ENST00000454497 PCGF6Q9BYE7 350 aa8.44□□□□□ -1.06
OTUD4-202ENST00000454497 RUSC2Q8N2Y8 1516 aa8.44□□□□□ -1.06
OTUD4-202ENST00000454497 WDR62O43379 1518 aa8.43□□□□□ -1.06
OTUD4-202ENST00000454497 CARMIL2Q6F5E8 1435 aa8.42□□□□□ -1.06
OTUD4-202ENST00000454497 FYCO1Q9BQS8 1478 aa8.41□□□□□ -1.06
OTUD4-202ENST00000454497 AKNAQ7Z591 1439 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms