RNA–Protein interactions for RNA: ENST00000542345.5

HMBS-213, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 3

Gene HMBS, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-213ENST00000542345 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
HMBS-213ENST00000542345 ABCC9O60706 1549 aa16.07■□□□□ 0.16
HMBS-213ENST00000542345 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
HMBS-213ENST00000542345 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
HMBS-213ENST00000542345 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
HMBS-213ENST00000542345 RB1CC1Q8TDY2 1594 aa15.16■□□□□ 0.02
HMBS-213ENST00000542345 NACADO15069 1562 aa15.05■□□□□ -0
HMBS-213ENST00000542345 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
HMBS-213ENST00000542345 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
HMBS-213ENST00000542345 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
HMBS-213ENST00000542345 BICRAQ9NZM4 1560 aa14.78□□□□□ -0.04
HMBS-213ENST00000542345 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
HMBS-213ENST00000542345 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
HMBS-213ENST00000542345 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
HMBS-213ENST00000542345 SHROOM4Q9ULL8 1493 aa14.44□□□□□ -0.1
HMBS-213ENST00000542345 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
HMBS-213ENST00000542345 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
HMBS-213ENST00000542345 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
HMBS-213ENST00000542345 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
HMBS-213ENST00000542345 AEBP2Q6ZN18 517 aaPredicted RBP13.94□□□□□ -0.18
HMBS-213ENST00000542345 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
HMBS-213ENST00000542345 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
HMBS-213ENST00000542345 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
HMBS-213ENST00000542345 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
HMBS-213ENST00000542345 SMARCA2P51531 1590 aa13.82□□□□□ -0.2
HMBS-213ENST00000542345 NESP48681 1621 aa13.81□□□□□ -0.2
HMBS-213ENST00000542345 HMGXB3Q12766 1538 aa13.79□□□□□ -0.2
HMBS-213ENST00000542345 BAZ1AQ9NRL2 1556 aaPredicted RBP13.79□□□□□ -0.2
HMBS-213ENST00000542345 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
HMBS-213ENST00000542345 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
HMBS-213ENST00000542345 CUX2O14529 1486 aa13.74□□□□□ -0.21
HMBS-213ENST00000542345 PEG3Q9GZU2 1588 aa13.7□□□□□ -0.22
HMBS-213ENST00000542345 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.23
HMBS-213ENST00000542345 WIZO95785 1651 aa13.58□□□□□ -0.24
HMBS-213ENST00000542345 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
HMBS-213ENST00000542345 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
HMBS-213ENST00000542345 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
HMBS-213ENST00000542345 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
HMBS-213ENST00000542345 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
HMBS-213ENST00000542345 MRC2Q9UBG0 1479 aa13.43□□□□□ -0.26
HMBS-213ENST00000542345 FANCD2Q9BXW9 1451 aa13.4□□□□□ -0.26
HMBS-213ENST00000542345 CFTRP13569 1480 aa13.38□□□□□ -0.27
HMBS-213ENST00000542345 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
HMBS-213ENST00000542345 WDR62O43379 1518 aa13.38□□□□□ -0.27
HMBS-213ENST00000542345 TOP2AP11388 1531 aaKnown RBP13.37□□□□□ -0.27
HMBS-213ENST00000542345 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
HMBS-213ENST00000542345 URB2Q14146 1524 aaKnown RBP13.3□□□□□ -0.28
HMBS-213ENST00000542345 CHIC1Q5VXU3 224 aa13.29□□□□□ -0.28
HMBS-213ENST00000542345 CCDC88BA6NC98 1476 aa13.29□□□□□ -0.28
HMBS-213ENST00000542345 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
HMBS-213ENST00000542345 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
HMBS-213ENST00000542345 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
HMBS-213ENST00000542345 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
HMBS-213ENST00000542345 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
HMBS-213ENST00000542345 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.321e-8■■■■■ 27.8
HMBS-213ENST00000542345 DNMBPQ6XZF7 1577 aa13.04□□□□□ -0.32
HMBS-213ENST00000542345 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
HMBS-213ENST00000542345 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
HMBS-213ENST00000542345 FBLN2P98095 1184 aa13.01□□□□□ -0.33
HMBS-213ENST00000542345 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
HMBS-213ENST00000542345 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
HMBS-213ENST00000542345 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
HMBS-213ENST00000542345 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
HMBS-213ENST00000542345 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
HMBS-213ENST00000542345 RIMBP3CA6NJZ7 1639 aa12.98□□□□□ -0.33
HMBS-213ENST00000542345 RIMBP3BA6NNM3 1639 aa12.98□□□□□ -0.33
HMBS-213ENST00000542345 RIMBP3Q9UFD9 1639 aa12.98□□□□□ -0.33
HMBS-213ENST00000542345 SOGA1O94964 1423 aa12.97□□□□□ -0.33
HMBS-213ENST00000542345 ARHGEF11O15085 1522 aa12.95□□□□□ -0.34
HMBS-213ENST00000542345 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
HMBS-213ENST00000542345 FGD5Q6ZNL6 1462 aa12.93□□□□□ -0.34
HMBS-213ENST00000542345 CUX1P39880 1505 aa12.93□□□□□ -0.34
HMBS-213ENST00000542345 CHD1O14646 1710 aa12.89□□□□□ -0.35
HMBS-213ENST00000542345 SNAPC4Q5SXM2 1469 aa12.88□□□□□ -0.35
HMBS-213ENST00000542345 CHMP7Q8WUX9 453 aaPredicted RBP12.87□□□□□ -0.35
HMBS-213ENST00000542345 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
HMBS-213ENST00000542345 GRIN2BQ13224 1484 aa12.82□□□□□ -0.36
HMBS-213ENST00000542345 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
HMBS-213ENST00000542345 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
HMBS-213ENST00000542345 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
HMBS-213ENST00000542345 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
HMBS-213ENST00000542345 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
HMBS-213ENST00000542345 WDR97A6NE52 1622 aa12.75□□□□□ -0.37
HMBS-213ENST00000542345 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
HMBS-213ENST00000542345 SYNJ1O43426 1573 aa12.73□□□□□ -0.37
HMBS-213ENST00000542345 WRNQ14191 1432 aaPredicted RBP eCLIP12.72□□□□□ -0.37
HMBS-213ENST00000542345 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
HMBS-213ENST00000542345 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
HMBS-213ENST00000542345 TOP2BQ02880 1626 aa12.66□□□□□ -0.38
HMBS-213ENST00000542345 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
HMBS-213ENST00000542345 ERCC6L2Q5T890 1561 aa12.65□□□□□ -0.38
HMBS-213ENST00000542345 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
HMBS-213ENST00000542345 CEP170Q5SW79 1584 aa12.62□□□□□ -0.39
HMBS-213ENST00000542345 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
HMBS-213ENST00000542345 ADAMTS12P58397 1594 aa12.61□□□□□ -0.39
HMBS-213ENST00000542345 NUP160Q12769 1436 aa12.61□□□□□ -0.39
HMBS-213ENST00000542345 ERICH3Q5RHP9 1530 aa12.56□□□□□ -0.4
HMBS-213ENST00000542345 JPH4Q96JJ6 628 aa12.55□□□□□ -0.4
HMBS-213ENST00000542345 PRG4Q92954 1404 aaPredicted RBP12.54□□□□□ -0.4
HMBS-213ENST00000542345 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms