RNA–Protein interactions for RNA: ENST00000636905.1

SYNGAP1-218, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-218ENST00000636905 NISCHQ9Y2I1 1504 aa12.24□□□□□ -0.45
SYNGAP1-218ENST00000636905 CCDC180Q9P1Z9 1646 aa10.67□□□□□ -0.7
SYNGAP1-218ENST00000636905 ZCCHC6Q5VYS8 1495 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-218ENST00000636905 DCAF1Q9Y4B6 1507 aa10.16□□□□□ -0.78
SYNGAP1-218ENST00000636905 DCAF8L2P0C7V8 631 aa10□□□□□ -0.81
SYNGAP1-218ENST00000636905 MYO15BQ96JP2 1530 aa10□□□□□ -0.81
SYNGAP1-218ENST00000636905 SHROOM4Q9ULL8 1493 aa9.99□□□□□ -0.81
SYNGAP1-218ENST00000636905 NACADO15069 1562 aa9.88□□□□□ -0.83
SYNGAP1-218ENST00000636905 ABCC9O60706 1549 aa9.87□□□□□ -0.83
SYNGAP1-218ENST00000636905 RB1CC1Q8TDY2 1594 aa9.75□□□□□ -0.85
SYNGAP1-218ENST00000636905 SCRIBQ14160 1630 aa9.74□□□□□ -0.85
SYNGAP1-218ENST00000636905 SUPT5HO00267 1087 aaKnown RBP9.71□□□□□ -0.86
SYNGAP1-218ENST00000636905 UNC13AQ9UPW8 1703 aa9.59□□□□□ -0.87
SYNGAP1-218ENST00000636905 RSF1Q96T23 1441 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-218ENST00000636905 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.9
SYNGAP1-218ENST00000636905 BAZ1AQ9NRL2 1556 aaPredicted RBP9.45□□□□□ -0.9
SYNGAP1-218ENST00000636905 MROH2BQ7Z745 1585 aa9.44□□□□□ -0.9
SYNGAP1-218ENST00000636905 BICRAQ9NZM4 1560 aa9.44□□□□□ -0.9
SYNGAP1-218ENST00000636905 SMARCA4P51532 1647 aa9.39□□□□□ -0.91
SYNGAP1-218ENST00000636905 CHIC1Q5VXU3 224 aa9.39□□□□□ -0.91
SYNGAP1-218ENST00000636905 WIZO95785 1651 aa9.39□□□□□ -0.91
SYNGAP1-218ENST00000636905 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
SYNGAP1-218ENST00000636905 TOP2AP11388 1531 aaKnown RBP9.3□□□□□ -0.92
SYNGAP1-218ENST00000636905 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
SYNGAP1-218ENST00000636905 SMARCA2P51531 1590 aa9.21□□□□□ -0.93
SYNGAP1-218ENST00000636905 CCDC88BA6NC98 1476 aa9.19□□□□□ -0.94
SYNGAP1-218ENST00000636905 EIF4G1Q04637 1599 aaKnown RBP9.18□□□□□ -0.94
SYNGAP1-218ENST00000636905 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
SYNGAP1-218ENST00000636905 TRIM41Q8WV44 630 aa9.15□□□□□ -0.94
SYNGAP1-218ENST00000636905 BAZ1BQ9UIG0 1483 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-218ENST00000636905 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
SYNGAP1-218ENST00000636905 NCAPD3P42695 1498 aa9.09□□□□□ -0.95
SYNGAP1-218ENST00000636905 ABCC8Q09428 1581 aa9.02□□□□□ -0.97
SYNGAP1-218ENST00000636905 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
SYNGAP1-218ENST00000636905 CC2D2AQ9P2K1 1620 aa8.98□□□□□ -0.97
SYNGAP1-218ENST00000636905 PRDM2Q13029 1718 aa8.97□□□□□ -0.97
SYNGAP1-218ENST00000636905 WRNQ14191 1432 aaPredicted RBP eCLIP8.97□□□□□ -0.97
SYNGAP1-218ENST00000636905 EEA1Q15075 1411 aa8.95□□□□□ -0.98
SYNGAP1-218ENST00000636905 FAM9AQ8IZU1 332 aaPredicted RBP8.93□□□□□ -0.98
SYNGAP1-218ENST00000636905 SYNJ1O43426 1573 aa8.92□□□□□ -0.98
SYNGAP1-218ENST00000636905 CFTRP13569 1480 aa8.92□□□□□ -0.98
SYNGAP1-218ENST00000636905 BIVM-ERCC5R4GMW8 1640 aa8.91□□□□□ -0.98
SYNGAP1-218ENST00000636905 TOP2BQ02880 1626 aa8.91□□□□□ -0.98
SYNGAP1-218ENST00000636905 SOGA1O94964 1423 aa8.87□□□□□ -0.99
SYNGAP1-218ENST00000636905 CADPSQ9ULU8 1353 aa8.86□□□□□ -0.99
SYNGAP1-218ENST00000636905 CSRNP3Q8WYN3 585 aa8.85□□□□□ -0.99
SYNGAP1-218ENST00000636905 RUSC2Q8N2Y8 1516 aa8.83□□□□□ -1
SYNGAP1-218ENST00000636905 CUX1P39880 1505 aa8.82□□□□□ -1
SYNGAP1-218ENST00000636905 KIF21BO75037 1637 aa8.82□□□□□ -1
SYNGAP1-218ENST00000636905 TNIKQ9UKE5 1360 aa8.81□□□□□ -1
SYNGAP1-218ENST00000636905 GOLGA3Q08378 1498 aa8.8□□□□□ -1
SYNGAP1-218ENST00000636905 CEP164Q9UPV0 1460 aa8.79□□□□□ -1
SYNGAP1-218ENST00000636905 LAMC3Q9Y6N6 1575 aa8.78□□□□□ -1
SYNGAP1-218ENST00000636905 TRIM26Q12899 539 aaPredicted RBP8.76□□□□□ -1.01
SYNGAP1-218ENST00000636905 EHMT2Q96KQ7 1210 aa8.76□□□□□ -1.01
SYNGAP1-218ENST00000636905 FANCD2Q9BXW9 1451 aa8.75□□□□□ -1.01
SYNGAP1-218ENST00000636905 KIF27Q86VH2 1401 aa8.74□□□□□ -1.01
SYNGAP1-218ENST00000636905 ERICH3Q5RHP9 1530 aa8.74□□□□□ -1.01
SYNGAP1-218ENST00000636905 CEP162Q5TB80 1403 aa8.73□□□□□ -1.01
SYNGAP1-218ENST00000636905 UBTFP17480 764 aaKnown RBP8.73□□□□□ -1.01
SYNGAP1-218ENST00000636905 PCGF6Q9BYE7 350 aa8.73□□□□□ -1.01
SYNGAP1-218ENST00000636905 DNMBPQ6XZF7 1577 aa8.73□□□□□ -1.01
SYNGAP1-218ENST00000636905 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
SYNGAP1-218ENST00000636905 PRXQ9BXM0 1461 aa8.7□□□□□ -1.02
SYNGAP1-218ENST00000636905 NESP48681 1621 aa8.7□□□□□ -1.02
SYNGAP1-218ENST00000636905 PDS5BQ9NTI5 1447 aa8.69□□□□□ -1.02
SYNGAP1-218ENST00000636905 RAPGEF2Q9Y4G8 1499 aa8.69□□□□□ -1.02
SYNGAP1-218ENST00000636905 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
SYNGAP1-218ENST00000636905 KIF21AQ7Z4S6 1674 aa8.66□□□□□ -1.02
SYNGAP1-218ENST00000636905 CUX2O14529 1486 aa8.66□□□□□ -1.02
SYNGAP1-218ENST00000636905 ABCA10Q8WWZ4 1543 aa8.65□□□□□ -1.02
SYNGAP1-218ENST00000636905 CLIP1P30622 1438 aa8.64□□□□□ -1.03
SYNGAP1-218ENST00000636905 URB2Q14146 1524 aaKnown RBP8.64□□□□□ -1.03
SYNGAP1-218ENST00000636905 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
SYNGAP1-218ENST00000636905 IGF1RP08069 1367 aa8.63□□□□□ -1.03
SYNGAP1-218ENST00000636905 WDR97A6NE52 1622 aa8.63□□□□□ -1.03
SYNGAP1-218ENST00000636905 HRCP23327 699 aa8.62□□□□□ -1.03
SYNGAP1-218ENST00000636905 DNAJC5BQ9UF47 199 aa8.61□□□□□ -1.03
SYNGAP1-218ENST00000636905 CUL7Q14999 1698 aa8.61□□□□□ -1.03
SYNGAP1-218ENST00000636905 CARMIL1Q5VZK9 1371 aa8.61□□□□□ -1.03
SYNGAP1-218ENST00000636905 VPS8Q8N3P4 1428 aa8.6□□□□□ -1.03
SYNGAP1-218ENST00000636905 RAD54L2Q9Y4B4 1467 aa8.59□□□□□ -1.03
SYNGAP1-218ENST00000636905 ABCA5Q8WWZ7 1642 aa8.58□□□□□ -1.04
SYNGAP1-218ENST00000636905 MRC2Q9UBG0 1479 aa8.57□□□□□ -1.04
SYNGAP1-218ENST00000636905 TARBP1Q13395 1621 aaKnown RBP8.56□□□□□ -1.04
SYNGAP1-218ENST00000636905 CTTNBP2Q8WZ74 1663 aa8.55□□□□□ -1.04
SYNGAP1-218ENST00000636905 ARAP1Q96P48 1450 aa8.54□□□□□ -1.04
SYNGAP1-218ENST00000636905 APLP2Q06481 763 aa8.54□□□□□ -1.04
SYNGAP1-218ENST00000636905 GAPVD1Q14C86 1478 aa8.53□□□□□ -1.04
SYNGAP1-218ENST00000636905 PPARGC1BQ86YN6 1023 aaKnown RBP8.53□□□□□ -1.04
SYNGAP1-218ENST00000636905 ARHGAP35Q9NRY4 1499 aa8.52□□□□□ -1.05
SYNGAP1-218ENST00000636905 ZEB1P37275 1124 aaPredicted RBP8.52□□□□□ -1.05
SYNGAP1-218ENST00000636905 WDR62O43379 1518 aa8.52□□□□□ -1.05
SYNGAP1-218ENST00000636905 PBRM1Q86U86 1689 aa8.52□□□□□ -1.05
SYNGAP1-218ENST00000636905 TDRD9Q8NDG6 1382 aaKnown RBP8.49□□□□□ -1.05
SYNGAP1-218ENST00000636905 RANGAP1P46060 587 aaPredicted RBP8.49□□□□□ -1.05
SYNGAP1-218ENST00000636905 IFT140Q96RY7 1462 aa8.49□□□□□ -1.05
SYNGAP1-218ENST00000636905 EFCAB5A4FU69 1503 aa8.49□□□□□ -1.05
SYNGAP1-218ENST00000636905 MAP3K1Q13233 1512 aa8.48□□□□□ -1.05
SYNGAP1-218ENST00000636905 THOC2Q8NI27 1593 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms