RNA–Protein interactions for RNA: ENST00000543543.5

HMBS-217, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 5

Gene HMBS, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-217ENST00000543543 NISCHQ9Y2I1 1504 aa24.84■■□□□ 1.57
HMBS-217ENST00000543543 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
HMBS-217ENST00000543543 ABCC9O60706 1549 aa21.42■■□□□ 1.02
HMBS-217ENST00000543543 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
HMBS-217ENST00000543543 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
HMBS-217ENST00000543543 RB1CC1Q8TDY2 1594 aa20.47■□□□□ 0.87
HMBS-217ENST00000543543 MYO15BQ96JP2 1530 aa20.45■□□□□ 0.86
HMBS-217ENST00000543543 NACADO15069 1562 aa20.37■□□□□ 0.85
HMBS-217ENST00000543543 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
HMBS-217ENST00000543543 UNC13AQ9UPW8 1703 aa20.15■□□□□ 0.82
HMBS-217ENST00000543543 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
HMBS-217ENST00000543543 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
HMBS-217ENST00000543543 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
HMBS-217ENST00000543543 BICRAQ9NZM4 1560 aa19.93■□□□□ 0.78
HMBS-217ENST00000543543 SCRIBQ14160 1630 aa19.82■□□□□ 0.76
HMBS-217ENST00000543543 CC2D2AQ9P2K1 1620 aa19.39■□□□□ 0.7
HMBS-217ENST00000543543 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
HMBS-217ENST00000543543 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
HMBS-217ENST00000543543 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
HMBS-217ENST00000543543 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
HMBS-217ENST00000543543 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
HMBS-217ENST00000543543 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
HMBS-217ENST00000543543 SMARCA4P51532 1647 aa19.09■□□□□ 0.65
HMBS-217ENST00000543543 WIZO95785 1651 aa18.96■□□□□ 0.63
HMBS-217ENST00000543543 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
HMBS-217ENST00000543543 TOP2AP11388 1531 aaKnown RBP18.85■□□□□ 0.61
HMBS-217ENST00000543543 SMARCA2P51531 1590 aa18.83■□□□□ 0.61
HMBS-217ENST00000543543 NCAPD3P42695 1498 aa18.8■□□□□ 0.6
HMBS-217ENST00000543543 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
HMBS-217ENST00000543543 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
HMBS-217ENST00000543543 BAZ1BQ9UIG0 1483 aaKnown RBP18.67■□□□□ 0.58
HMBS-217ENST00000543543 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
HMBS-217ENST00000543543 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
HMBS-217ENST00000543543 NESP48681 1621 aa18.49■□□□□ 0.55
HMBS-217ENST00000543543 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
HMBS-217ENST00000543543 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
HMBS-217ENST00000543543 CUX2O14529 1486 aa18.36■□□□□ 0.53
HMBS-217ENST00000543543 KIF21AQ7Z4S6 1674 aa18.3■□□□□ 0.52
HMBS-217ENST00000543543 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
HMBS-217ENST00000543543 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
HMBS-217ENST00000543543 CFTRP13569 1480 aa18.22■□□□□ 0.51
HMBS-217ENST00000543543 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
HMBS-217ENST00000543543 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
HMBS-217ENST00000543543 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
HMBS-217ENST00000543543 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
HMBS-217ENST00000543543 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
HMBS-217ENST00000543543 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
HMBS-217ENST00000543543 MRC2Q9UBG0 1479 aa18.06■□□□□ 0.48
HMBS-217ENST00000543543 WDR62O43379 1518 aa18.03■□□□□ 0.48
HMBS-217ENST00000543543 FANCD2Q9BXW9 1451 aa18.03■□□□□ 0.48
HMBS-217ENST00000543543 CEP164Q9UPV0 1460 aa18.02■□□□□ 0.48
HMBS-217ENST00000543543 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
HMBS-217ENST00000543543 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
HMBS-217ENST00000543543 SYNJ1O43426 1573 aa18■□□□□ 0.47
HMBS-217ENST00000543543 EEA1Q15075 1411 aa18■□□□□ 0.47
HMBS-217ENST00000543543 CUX1P39880 1505 aa17.9■□□□□ 0.46
HMBS-217ENST00000543543 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
HMBS-217ENST00000543543 SOGA1O94964 1423 aa17.82■□□□□ 0.44
HMBS-217ENST00000543543 FAM9AQ8IZU1 332 aaPredicted RBP17.81■□□□□ 0.44
HMBS-217ENST00000543543 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
HMBS-217ENST00000543543 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
HMBS-217ENST00000543543 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
HMBS-217ENST00000543543 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
HMBS-217ENST00000543543 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
HMBS-217ENST00000543543 FGD5Q6ZNL6 1462 aa17.71■□□□□ 0.43
HMBS-217ENST00000543543 KIF27Q86VH2 1401 aa17.71■□□□□ 0.43
HMBS-217ENST00000543543 KIF21BO75037 1637 aa17.69■□□□□ 0.42
HMBS-217ENST00000543543 GOLGA3Q08378 1498 aa17.66■□□□□ 0.42
HMBS-217ENST00000543543 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
HMBS-217ENST00000543543 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.42
HMBS-217ENST00000543543 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
HMBS-217ENST00000543543 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
HMBS-217ENST00000543543 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
HMBS-217ENST00000543543 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
HMBS-217ENST00000543543 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
HMBS-217ENST00000543543 PRXQ9BXM0 1461 aa17.57■□□□□ 0.4
HMBS-217ENST00000543543 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
HMBS-217ENST00000543543 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
HMBS-217ENST00000543543 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
HMBS-217ENST00000543543 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
HMBS-217ENST00000543543 UBTFP17480 764 aaKnown RBP17.51■□□□□ 0.39
HMBS-217ENST00000543543 IGF1RP08069 1367 aa17.5■□□□□ 0.39
HMBS-217ENST00000543543 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.398e-8■■■■■ 27.7
HMBS-217ENST00000543543 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
HMBS-217ENST00000543543 CEP162Q5TB80 1403 aa17.46■□□□□ 0.38
HMBS-217ENST00000543543 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
HMBS-217ENST00000543543 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
HMBS-217ENST00000543543 CUL7Q14999 1698 aa17.45■□□□□ 0.38
HMBS-217ENST00000543543 CHD1O14646 1710 aa17.45■□□□□ 0.38
HMBS-217ENST00000543543 CARMIL1Q5VZK9 1371 aa17.43■□□□□ 0.38
HMBS-217ENST00000543543 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
HMBS-217ENST00000543543 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
HMBS-217ENST00000543543 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
HMBS-217ENST00000543543 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
HMBS-217ENST00000543543 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
HMBS-217ENST00000543543 CLIP1P30622 1438 aa17.34■□□□□ 0.37
HMBS-217ENST00000543543 PBRM1Q86U86 1689 aa17.31■□□□□ 0.36
HMBS-217ENST00000543543 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
HMBS-217ENST00000543543 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
HMBS-217ENST00000543543 GRIN2BQ13224 1484 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms