RNA–Protein interactions for RNA: ENST00000538183.6

SOD2-211, Transcript of superoxide dismutase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD2, Length 14,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-211ENST00000538183 DCAF8L2P0C7V8 631 aa12.67□□□□□ -0.38
SOD2-211ENST00000538183 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.45
SOD2-211ENST00000538183 SHROOM4Q9ULL8 1493 aa12.05□□□□□ -0.48
SOD2-211ENST00000538183 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
SOD2-211ENST00000538183 NISCHQ9Y2I1 1504 aa11.92□□□□□ -0.5
SOD2-211ENST00000538183 PELP1Q8IZL8 1130 aaKnown RBP11.78□□□□□ -0.52
SOD2-211ENST00000538183 TTBK1Q5TCY1 1321 aaPredicted RBP11.65□□□□□ -0.54
SOD2-211ENST00000538183 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
SOD2-211ENST00000538183 FAM9AQ8IZU1 332 aaPredicted RBP11.56□□□□□ -0.56
SOD2-211ENST00000538183 APLP2Q06481 763 aa11.47□□□□□ -0.57
SOD2-211ENST00000538183 RANGAP1P46060 587 aaPredicted RBP11.38□□□□□ -0.59
SOD2-211ENST00000538183 CENPBP07199 599 aaPredicted RBP11.32□□□□□ -0.6
SOD2-211ENST00000538183 CCER1Q8TC90 406 aaPredicted RBP11.31□□□□□ -0.6
SOD2-211ENST00000538183 YTHDC1Q96MU7 727 aaKnown RBP11.3□□□□□ -0.6
SOD2-211ENST00000538183 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
SOD2-211ENST00000538183 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
SOD2-211ENST00000538183 MYT1Q01538 1121 aa11.27□□□□□ -0.61
SOD2-211ENST00000538183 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.62
SOD2-211ENST00000538183 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
SOD2-211ENST00000538183 ATP1B4Q9UN42 357 aaPredicted RBP11.16□□□□□ -0.62
SOD2-211ENST00000538183 UBTFP17480 764 aaKnown RBP11.1□□□□□ -0.63
SOD2-211ENST00000538183 NEFLP07196 543 aa11.05□□□□□ -0.64
SOD2-211ENST00000538183 HRCP23327 699 aa10.99□□□□□ -0.65
SOD2-211ENST00000538183 TRIM26Q12899 539 aaPredicted RBP10.97□□□□□ -0.65
SOD2-211ENST00000538183 LOC105371045A0A1W2PR82 267 aa10.93□□□□□ -0.66
SOD2-211ENST00000538183 ITGAEP38570 1179 aa10.88□□□□□ -0.67
SOD2-211ENST00000538183 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
SOD2-211ENST00000538183 CNGB1Q14028 1251 aaPredicted RBP10.82□□□□□ -0.68
SOD2-211ENST00000538183 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
SOD2-211ENST00000538183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
SOD2-211ENST00000538183 CHIC1Q5VXU3 224 aa10.76□□□□□ -0.69
SOD2-211ENST00000538183 DAXXQ9UER7 740 aaPredicted RBP10.75□□□□□ -0.69
SOD2-211ENST00000538183 DIEXFQ68CQ4 756 aaKnown RBP10.7□□□□□ -0.7
SOD2-211ENST00000538183 BCANQ96GW7 911 aa10.65□□□□□ -0.71
SOD2-211ENST00000538183 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
SOD2-211ENST00000538183 MYT1LQ9UL68 1186 aa10.6□□□□□ -0.71
SOD2-211ENST00000538183 RTL5Q5HYW3 569 aaPredicted RBP10.56□□□□□ -0.72
SOD2-211ENST00000538183 ZNF316A6NFI3 1004 aaPredicted RBP10.56□□□□□ -0.72
SOD2-211ENST00000538183 SLC4A1APQ9BWU0 796 aaKnown RBP10.54□□□□□ -0.72
SOD2-211ENST00000538183 NEUROD1Q13562 356 aa10.53□□□□□ -0.72
SOD2-211ENST00000538183 FAM50AQ14320 339 aaKnown RBP10.52□□□□□ -0.72
SOD2-211ENST00000538183 CLSPNQ9HAW4 1339 aa10.51□□□□□ -0.73
SOD2-211ENST00000538183 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
SOD2-211ENST00000538183 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
SOD2-211ENST00000538183 ANP32CO43423 234 aa10.39□□□□□ -0.75
SOD2-211ENST00000538183 ACIN1Q9UKV3 1341 aaKnown RBP10.38□□□□□ -0.75
SOD2-211ENST00000538183 CDK11AQ9UQ88 783 aaPredicted RBP10.37□□□□□ -0.75
SOD2-211ENST00000538183 BCL11AQ9H165 835 aa10.35□□□□□ -0.75
SOD2-211ENST00000538183 PABPN1Q86U42 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
SOD2-211ENST00000538183 NPM2Q86SE8 214 aaKnown RBP10.28□□□□□ -0.76
SOD2-211ENST00000538183 ARID3CA6NKF2 412 aa10.27□□□□□ -0.76
SOD2-211ENST00000538183 CANXP27824 592 aaKnown RBP10.25□□□□□ -0.77
SOD2-211ENST00000538183 ABCC9O60706 1549 aa10.24□□□□□ -0.77
SOD2-211ENST00000538183 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
SOD2-211ENST00000538183 FKBP8Q14318 412 aa10.22□□□□□ -0.77
SOD2-211ENST00000538183 ANP32AP39687 249 aaKnown RBP10.22□□□□□ -0.77
SOD2-211ENST00000538183 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
SOD2-211ENST00000538183 SCAF1Q9H7N4 1312 aaKnown RBP10.18□□□□□ -0.78
SOD2-211ENST00000538183 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
SOD2-211ENST00000538183 FBLN2P98095 1184 aa10.16□□□□□ -0.78
SOD2-211ENST00000538183 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
SOD2-211ENST00000538183 NBR1Q14596 966 aa10.15□□□□□ -0.78
SOD2-211ENST00000538183 DDX10Q13206 875 aaKnown RBP10.12□□□□□ -0.79
SOD2-211ENST00000538183 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
SOD2-211ENST00000538183 HNRNPUQ00839 825 aaKnown RBP eCLIP10.11□□□□□ -0.79
SOD2-211ENST00000538183 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
SOD2-211ENST00000538183 DCAF1Q9Y4B6 1507 aa10.11□□□□□ -0.79
SOD2-211ENST00000538183 FAM9BQ8IZU0 186 aa10.11□□□□□ -0.79
SOD2-211ENST00000538183 SALL2Q9Y467 1007 aaPredicted RBP10.1□□□□□ -0.79
SOD2-211ENST00000538183 CSRNP3Q8WYN3 585 aa10.09□□□□□ -0.79
SOD2-211ENST00000538183 IRX6P78412 446 aaPredicted RBP10.09□□□□□ -0.79
SOD2-211ENST00000538183 ARXQ96QS3 562 aa10.08□□□□□ -0.8
SOD2-211ENST00000538183 MIER1Q8N108 512 aa10.06□□□□□ -0.8
SOD2-211ENST00000538183 TONSLQ96HA7 1378 aa10.06□□□□□ -0.8
SOD2-211ENST00000538183 HIRIP3Q9BW71 556 aaPredicted RBP10.05□□□□□ -0.8
SOD2-211ENST00000538183 MYO15BQ96JP2 1530 aa10.05□□□□□ -0.8
SOD2-211ENST00000538183 HSP90AA1P07900 732 aaKnown RBP10.03□□□□□ -0.8
SOD2-211ENST00000538183 ANP32BQ92688 251 aaKnown RBP10.03□□□□□ -0.8
SOD2-211ENST00000538183 NEFMP07197 916 aa10.02□□□□□ -0.81
SOD2-211ENST00000538183 CCDC136Q96JN2 1154 aa10□□□□□ -0.81
SOD2-211ENST00000538183 CHIC2Q9UKJ5 165 aa9.99□□□□□ -0.81
SOD2-211ENST00000538183 GLIPR1L2Q4G1C9 344 aa9.98□□□□□ -0.81
SOD2-211ENST00000538183 SENP3-EIF4A1A0A087X0R7 540 aa9.97□□□□□ -0.81
SOD2-211ENST00000538183 UPF2Q9HAU5 1272 aaKnown RBP9.95□□□□□ -0.82
SOD2-211ENST00000538183 MRS2Q9HD23 443 aa9.95□□□□□ -0.82
SOD2-211ENST00000538183 CHGAP10645 457 aaKnown RBP9.94□□□□□ -0.82
SOD2-211ENST00000538183 TMC1Q8TDI8 760 aa9.93□□□□□ -0.82
SOD2-211ENST00000538183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.92□□□□□ -0.823e-10■□□□□ 9.2
SOD2-211ENST00000538183 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
SOD2-211ENST00000538183 PLPPR3Q6T4P5 718 aa9.91□□□□□ -0.82
SOD2-211ENST00000538183 CCDC180Q9P1Z9 1646 aa9.91□□□□□ -0.82
SOD2-211ENST00000538183 SENP3Q9H4L4 574 aaPredicted RBP9.9□□□□□ -0.82
SOD2-211ENST00000538183 ZCCHC6Q5VYS8 1495 aaKnown RBP9.87□□□□□ -0.83
SOD2-211ENST00000538183 WDR43Q15061 677 aaKnown RBP eCLIP9.86□□□□□ -0.83
SOD2-211ENST00000538183 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.86□□□□□ -0.83
SOD2-211ENST00000538183 STAG3Q9UJ98 1225 aa9.85□□□□□ -0.83
SOD2-211ENST00000538183 CLIP1P30622 1438 aa9.85□□□□□ -0.83
SOD2-211ENST00000538183 RRP7BPQ9NSQ0 103 aa9.84□□□□□ -0.83
SOD2-211ENST00000538183 ANP32EQ9BTT0 268 aa9.82□□□□□ -0.84
SOD2-211ENST00000538183 RTN4Q9NQC3 1192 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms