RNA–Protein interactions for RNA: ENST00000509985.1

OTUD4-209, Transcript of OTU deubiquitinase 4, humanhuman

TSL 4

Gene OTUD4, Length 467 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-209ENST00000509985 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
OTUD4-209ENST00000509985 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
OTUD4-209ENST00000509985 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
OTUD4-209ENST00000509985 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
OTUD4-209ENST00000509985 FOXD1Q16676 465 aa17.99■□□□□ 0.47
OTUD4-209ENST00000509985 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
OTUD4-209ENST00000509985 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
OTUD4-209ENST00000509985 ADRA2BP18089 450 aa17.27■□□□□ 0.36
OTUD4-209ENST00000509985 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
OTUD4-209ENST00000509985 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
OTUD4-209ENST00000509985 MSH5O43196 834 aa16.48■□□□□ 0.23
OTUD4-209ENST00000509985 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
OTUD4-209ENST00000509985 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
OTUD4-209ENST00000509985 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
OTUD4-209ENST00000509985 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
OTUD4-209ENST00000509985 KCNA4P22459 653 aa15.35■□□□□ 0.05
OTUD4-209ENST00000509985 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
OTUD4-209ENST00000509985 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
OTUD4-209ENST00000509985 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
OTUD4-209ENST00000509985 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
OTUD4-209ENST00000509985 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
OTUD4-209ENST00000509985 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
OTUD4-209ENST00000509985 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
OTUD4-209ENST00000509985 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
OTUD4-209ENST00000509985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
OTUD4-209ENST00000509985 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
OTUD4-209ENST00000509985 RNF39Q9H2S5 420 aa14.18□□□□□ -0.14
OTUD4-209ENST00000509985 ZBTB22O15209 634 aa14.16□□□□□ -0.14
OTUD4-209ENST00000509985 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
OTUD4-209ENST00000509985 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
OTUD4-209ENST00000509985 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
OTUD4-209ENST00000509985 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
OTUD4-209ENST00000509985 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
OTUD4-209ENST00000509985 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
OTUD4-209ENST00000509985 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
OTUD4-209ENST00000509985 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
OTUD4-209ENST00000509985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
OTUD4-209ENST00000509985 CAPN15O75808 1086 aa13.72□□□□□ -0.21
OTUD4-209ENST00000509985 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
OTUD4-209ENST00000509985 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
OTUD4-209ENST00000509985 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
OTUD4-209ENST00000509985 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
OTUD4-209ENST00000509985 APLP2Q06481 763 aa13.57□□□□□ -0.24
OTUD4-209ENST00000509985 ABCB7O75027 752 aa13.52□□□□□ -0.25
OTUD4-209ENST00000509985 DSG3P32926 999 aa13.49□□□□□ -0.25
OTUD4-209ENST00000509985 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
OTUD4-209ENST00000509985 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
OTUD4-209ENST00000509985 POLA2Q14181 598 aa13.38□□□□□ -0.27
OTUD4-209ENST00000509985 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
OTUD4-209ENST00000509985 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
OTUD4-209ENST00000509985 FBLN2P98095 1184 aa12.95□□□□□ -0.34
OTUD4-209ENST00000509985 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
OTUD4-209ENST00000509985 POTEHQ6S545 545 aa12.94□□□□□ -0.34
OTUD4-209ENST00000509985 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
OTUD4-209ENST00000509985 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
OTUD4-209ENST00000509985 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
OTUD4-209ENST00000509985 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
OTUD4-209ENST00000509985 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
OTUD4-209ENST00000509985 SPDYE4A6NLX3 237 aa12.64□□□□□ -0.39
OTUD4-209ENST00000509985 FKBP8Q14318 412 aa12.61□□□□□ -0.39
OTUD4-209ENST00000509985 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
OTUD4-209ENST00000509985 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
OTUD4-209ENST00000509985 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
OTUD4-209ENST00000509985 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
OTUD4-209ENST00000509985 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
OTUD4-209ENST00000509985 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
OTUD4-209ENST00000509985 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
OTUD4-209ENST00000509985 PROM2Q8N271 834 aa12.35□□□□□ -0.43
OTUD4-209ENST00000509985 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
OTUD4-209ENST00000509985 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
OTUD4-209ENST00000509985 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
OTUD4-209ENST00000509985 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
OTUD4-209ENST00000509985 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
OTUD4-209ENST00000509985 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
OTUD4-209ENST00000509985 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
OTUD4-209ENST00000509985 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
OTUD4-209ENST00000509985 MIER1Q8N108 512 aa12.03□□□□□ -0.48
OTUD4-209ENST00000509985 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
OTUD4-209ENST00000509985 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
OTUD4-209ENST00000509985 VASPP50552 380 aaPredicted RBP11.96□□□□□ -0.49
OTUD4-209ENST00000509985 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
OTUD4-209ENST00000509985 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
OTUD4-209ENST00000509985 HAX1O00165 279 aa11.85□□□□□ -0.51
OTUD4-209ENST00000509985 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
OTUD4-209ENST00000509985 EVX2Q03828 476 aa11.84□□□□□ -0.51
OTUD4-209ENST00000509985 SP7Q8TDD2 431 aaPredicted RBP11.84□□□□□ -0.51
OTUD4-209ENST00000509985 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
OTUD4-209ENST00000509985 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
OTUD4-209ENST00000509985 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
OTUD4-209ENST00000509985 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
OTUD4-209ENST00000509985 CD44P16070 742 aaKnown RBP11.74□□□□□ -0.53
OTUD4-209ENST00000509985 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
OTUD4-209ENST00000509985 NUBP1P53384 320 aa11.72□□□□□ -0.53
OTUD4-209ENST00000509985 TSPYL2Q9H2G4 693 aaPredicted RBP11.72□□□□□ -0.53
OTUD4-209ENST00000509985 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
OTUD4-209ENST00000509985 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
OTUD4-209ENST00000509985 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
OTUD4-209ENST00000509985 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
OTUD4-209ENST00000509985 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
OTUD4-209ENST00000509985 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms