RNA–Protein interactions for RNA: ENST00000367055.8

SOD2-203, Transcript of superoxide dismutase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD2, Length 990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-203ENST00000367055 NISCHQ9Y2I1 1504 aa25.13■■□□□ 1.61
SOD2-203ENST00000367055 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
SOD2-203ENST00000367055 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
SOD2-203ENST00000367055 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
SOD2-203ENST00000367055 ABCC9O60706 1549 aa22.09■■□□□ 1.13
SOD2-203ENST00000367055 DCAF8L2P0C7V8 631 aa21.09■□□□□ 0.97
SOD2-203ENST00000367055 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
SOD2-203ENST00000367055 NACADO15069 1562 aa21.01■□□□□ 0.95
SOD2-203ENST00000367055 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
SOD2-203ENST00000367055 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
SOD2-203ENST00000367055 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
SOD2-203ENST00000367055 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
SOD2-203ENST00000367055 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.88
SOD2-203ENST00000367055 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
SOD2-203ENST00000367055 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
SOD2-203ENST00000367055 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
SOD2-203ENST00000367055 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
SOD2-203ENST00000367055 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
SOD2-203ENST00000367055 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
SOD2-203ENST00000367055 CECR2Q9BXF3 1484 aa19.94■□□□□ 0.78
SOD2-203ENST00000367055 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
SOD2-203ENST00000367055 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
SOD2-203ENST00000367055 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
SOD2-203ENST00000367055 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
SOD2-203ENST00000367055 DNAJC5Q9H3Z4 198 aa19.52■□□□□ 0.72
SOD2-203ENST00000367055 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
SOD2-203ENST00000367055 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
SOD2-203ENST00000367055 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
SOD2-203ENST00000367055 NCAPD3P42695 1498 aa19.3■□□□□ 0.68
SOD2-203ENST00000367055 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
SOD2-203ENST00000367055 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
SOD2-203ENST00000367055 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
SOD2-203ENST00000367055 WIZO95785 1651 aa19.23■□□□□ 0.67
SOD2-203ENST00000367055 CUX2O14529 1486 aa19.16■□□□□ 0.66
SOD2-203ENST00000367055 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.65
SOD2-203ENST00000367055 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
SOD2-203ENST00000367055 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
SOD2-203ENST00000367055 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
SOD2-203ENST00000367055 NESP48681 1621 aa18.92■□□□□ 0.62
SOD2-203ENST00000367055 FOXD1Q16676 465 aa18.92■□□□□ 0.62
SOD2-203ENST00000367055 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
SOD2-203ENST00000367055 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
SOD2-203ENST00000367055 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
SOD2-203ENST00000367055 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
SOD2-203ENST00000367055 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
SOD2-203ENST00000367055 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
SOD2-203ENST00000367055 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
SOD2-203ENST00000367055 CFTRP13569 1480 aa18.67■□□□□ 0.58
SOD2-203ENST00000367055 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
SOD2-203ENST00000367055 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
SOD2-203ENST00000367055 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
SOD2-203ENST00000367055 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
SOD2-203ENST00000367055 WDR62O43379 1518 aa18.5■□□□□ 0.55
SOD2-203ENST00000367055 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
SOD2-203ENST00000367055 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
SOD2-203ENST00000367055 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
SOD2-203ENST00000367055 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
SOD2-203ENST00000367055 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
SOD2-203ENST00000367055 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
SOD2-203ENST00000367055 CUX1P39880 1505 aa18.18■□□□□ 0.5
SOD2-203ENST00000367055 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
SOD2-203ENST00000367055 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
SOD2-203ENST00000367055 WRNQ14191 1432 aaPredicted RBP eCLIP18.12■□□□□ 0.49
SOD2-203ENST00000367055 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
SOD2-203ENST00000367055 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
SOD2-203ENST00000367055 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
SOD2-203ENST00000367055 SOGA1O94964 1423 aa18.09■□□□□ 0.49
SOD2-203ENST00000367055 TOP2BQ02880 1626 aa18.08■□□□□ 0.48
SOD2-203ENST00000367055 SYNJ1O43426 1573 aa18.08■□□□□ 0.48
SOD2-203ENST00000367055 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
SOD2-203ENST00000367055 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
SOD2-203ENST00000367055 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
SOD2-203ENST00000367055 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
SOD2-203ENST00000367055 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
SOD2-203ENST00000367055 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
SOD2-203ENST00000367055 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
SOD2-203ENST00000367055 AQRO60306 1485 aaKnown RBP eCLIP17.99■□□□□ 0.471e-6■■■■■ 33.2
SOD2-203ENST00000367055 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
SOD2-203ENST00000367055 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
SOD2-203ENST00000367055 ABCA10Q8WWZ4 1543 aa17.94■□□□□ 0.46
SOD2-203ENST00000367055 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
SOD2-203ENST00000367055 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
SOD2-203ENST00000367055 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
SOD2-203ENST00000367055 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.45
SOD2-203ENST00000367055 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
SOD2-203ENST00000367055 CHD1O14646 1710 aa17.88■□□□□ 0.45
SOD2-203ENST00000367055 CYB5RLQ6IPT4 315 aa17.87■□□□□ 0.45
SOD2-203ENST00000367055 FBLN2P98095 1184 aa17.86■□□□□ 0.45
SOD2-203ENST00000367055 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
SOD2-203ENST00000367055 MSH5O43196 834 aa17.8■□□□□ 0.44
SOD2-203ENST00000367055 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
SOD2-203ENST00000367055 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.44
SOD2-203ENST00000367055 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
SOD2-203ENST00000367055 SYNJ2O15056 1496 aa17.75■□□□□ 0.43
SOD2-203ENST00000367055 ADAMTS12P58397 1594 aa17.75■□□□□ 0.43
SOD2-203ENST00000367055 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
SOD2-203ENST00000367055 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
SOD2-203ENST00000367055 PIAS4Q8N2W9 510 aaPredicted RBP17.7■□□□□ 0.42
SOD2-203ENST00000367055 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
SOD2-203ENST00000367055 CUL7Q14999 1698 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms