Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MYADM-208ENST00000439000 841 ntTSL 317.04■□□□□ 0.323e-6■■■■□ 20.8
XRN2Q9H0D6 MYADM-209ENST00000448420 777 ntTSL 215.85■□□□□ 0.133e-6■■■■□ 20.8
XRN2Q9H0D6 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.153e-6■■■■□ 20.8
XRN2Q9H0D6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.183e-6■■■■□ 20.8
XRN2Q9H0D6 ARHGEF16-207ENST00000485984 2340 ntTSL 217.36■□□□□ 0.371e-6■■■■□ 20.8
XRN2Q9H0D6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.246e-6■■■■□ 20.8
XRN2Q9H0D6 EEF1D-208ENST00000524883 828 ntTSL 222.05■■□□□ 1.122e-32■■■■□ 20.8
XRN2Q9H0D6 EEF1D-222ENST00000528519 553 ntTSL 319.42■□□□□ 0.72e-32■■■■□ 20.8
XRN2Q9H0D6 FLOT1-207ENST00000454845 629 ntTSL 318.28■□□□□ 0.522e-7■■■■□ 20.8
XRN2Q9H0D6 MACROD1-207ENST00000543422 403 ntTSL 316.6■□□□□ 0.254e-6■■■■□ 20.8
XRN2Q9H0D6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.061e-6■■■■□ 20.8
XRN2Q9H0D6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.782e-6■■■■□ 20.8
XRN2Q9H0D6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.221e-6■■■■□ 20.8
XRN2Q9H0D6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.331e-6■■■■□ 20.8
XRN2Q9H0D6 LAMA5-202ENST00000370677 1674 ntTSL 221.83■■□□□ 1.091e-6■■■■□ 20.8
XRN2Q9H0D6 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.442e-14■■■■□ 20.8
XRN2Q9H0D6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.524e-6■■■■□ 20.7
XRN2Q9H0D6 SREBF2-203ENST00000435061 770 ntTSL 320.8■□□□□ 0.921e-9■■■■□ 20.7
XRN2Q9H0D6 SREBF2-208ENST00000491541 4043 ntTSL 1 (best)9.77□□□□□ -0.851e-9■■■■□ 20.7
XRN2Q9H0D6 ZEB2-219ENST00000475115 536 ntTSL 59.12□□□□□ -0.959e-7■■■■□ 20.7
XRN2Q9H0D6 CBFA2T3-207ENST00000564416 399 ntTSL 518.37■□□□□ 0.531e-6■■■■□ 20.7
XRN2Q9H0D6 GNPTG-205ENST00000527168 1317 ntTSL 527.2■■□□□ 1.954e-6■■■■□ 20.7
XRN2Q9H0D6 GNPTG-209ENST00000534197 420 ntTSL 326.81■■□□□ 1.884e-6■■■■□ 20.7
XRN2Q9H0D6 GNPTG-208ENST00000529957 922 ntTSL 526.81■■□□□ 1.884e-6■■■■□ 20.7
XRN2Q9H0D6 GNPTG-206ENST00000527876 550 ntTSL 426.56■■□□□ 1.844e-6■■■■□ 20.7
XRN2Q9H0D6 GNPTG-207ENST00000529110 552 ntTSL 226.21■■□□□ 1.794e-6■■■■□ 20.7
XRN2Q9H0D6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.484e-6■■■■□ 20.7
XRN2Q9H0D6 GNPTG-202ENST00000526820 572 ntTSL 323.26■■□□□ 1.314e-6■■■■□ 20.7
XRN2Q9H0D6 FLOT2-208ENST00000582174 703 ntTSL 322.88■■□□□ 1.254e-12■■■■□ 20.7
XRN2Q9H0D6 AP2A2-218ENST00000529858 550 ntTSL 422.86■■□□□ 1.251e-7■■■■□ 20.7
XRN2Q9H0D6 BAIAP2-230ENST00000577097 1014 ntTSL 321.83■■□□□ 1.091e-7■■■■□ 20.7
XRN2Q9H0D6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.82■■□□□ 1.084e-12■■■■□ 20.7
XRN2Q9H0D6 FLOT2-212ENST00000593158 752 ntTSL 521.38■■□□□ 1.014e-12■■■■□ 20.7
XRN2Q9H0D6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.67■□□□□ 0.93e-7■■■■□ 20.7
XRN2Q9H0D6 SSSCA1-202ENST00000526433 739 ntTSL 318.93■□□□□ 0.621e-6■■■■□ 20.7
XRN2Q9H0D6 GAMT-204ENST00000640164 520 ntTSL 218.69■□□□□ 0.584e-12■■■■□ 20.7
XRN2Q9H0D6 BAIAP2-225ENST00000576225 2316 ntTSL 218.39■□□□□ 0.531e-7■■■■□ 20.7
XRN2Q9H0D6 ATP13A1-204ENST00000467160 2431 ntTSL 218.23■□□□□ 0.514e-12■■■■□ 20.7
XRN2Q9H0D6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.494e-12■■■■□ 20.7
XRN2Q9H0D6 BAIAP2-216ENST00000574027 604 ntTSL 418.07■□□□□ 0.481e-7■■■■□ 20.7
XRN2Q9H0D6 RPL3-215ENST00000481985 557 ntTSL 216.51■□□□□ 0.234e-12■■■■□ 20.7
XRN2Q9H0D6 FLOT2-204ENST00000577789 2503 ntTSL 516.51■□□□□ 0.234e-12■■■■□ 20.7
XRN2Q9H0D6 FLOT2-206ENST00000580805 2679 ntTSL 516.33■□□□□ 0.214e-12■■■■□ 20.7
XRN2Q9H0D6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.7■□□□□ 0.14e-12■■■■□ 20.7
XRN2Q9H0D6 FLOT2-211ENST00000586827 1069 ntTSL 514.84□□□□□ -0.034e-12■■■■□ 20.7
XRN2Q9H0D6 BAIAP2-222ENST00000575841 509 ntTSL 214.29□□□□□ -0.121e-7■■■■□ 20.7
XRN2Q9H0D6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.144e-12■■■■□ 20.7
XRN2Q9H0D6 RPL3-213ENST00000471290 481 ntTSL 213.77□□□□□ -0.214e-12■■■■□ 20.7
XRN2Q9H0D6 GAMT-203ENST00000591788 401 ntTSL 58.11□□□□□ -1.114e-12■■■■□ 20.7
XRN2Q9H0D6 RUFY3-206ENST00000503876 531 ntTSL 46.2□□□□□ -1.424e-12■■■■□ 20.7
XRN2Q9H0D6 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.245e-6■■■■□ 20.7
XRN2Q9H0D6 FASN-211ENST00000637026 100 ntTSL 513.13□□□□□ -0.317e-8■■■■□ 20.7
XRN2Q9H0D6 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.452e-6■■■■□ 20.7
XRN2Q9H0D6 AKT1-212ENST00000555380 534 ntTSL 413.8□□□□□ -0.24e-6■■■■□ 20.7
XRN2Q9H0D6 GPX4-211ENST00000614791 431 ntTSL 328.64■■■□□ 2.184e-19■■■■□ 20.7
XRN2Q9H0D6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.82■■□□□ 1.881e-7■■■■□ 20.7
XRN2Q9H0D6 ATXN2L-223ENST00000568266 1294 ntTSL 520.35■□□□□ 0.852e-8■■■■□ 20.7
XRN2Q9H0D6 ATXN2L-216ENST00000564656 552 ntTSL 417.48■□□□□ 0.392e-8■■■■□ 20.7
XRN2Q9H0D6 MARS-215ENST00000548944 294 ntTSL 316.92■□□□□ 0.35e-7■■■■□ 20.7
XRN2Q9H0D6 ANKRD11-202ENST00000330736 8342 ntTSL 513.62□□□□□ -0.231e-6■■■■□ 20.7
XRN2Q9H0D6 NME4-204ENST00000433358 966 ntTSL 327.91■■■□□ 2.069e-7■■■■□ 20.7
XRN2Q9H0D6 NME4-206ENST00000448828 1167 ntTSL 227.14■■□□□ 1.949e-7■■■■□ 20.7
XRN2Q9H0D6 NME4-209ENST00000460297 1652 ntTSL 526.77■■□□□ 1.889e-7■■■■□ 20.7
XRN2Q9H0D6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.779e-7■■■■□ 20.7
XRN2Q9H0D6 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.84■■□□□ 1.739e-7■■■■□ 20.7
XRN2Q9H0D6 NME4-205ENST00000444498 1111 ntTSL 322.17■■□□□ 1.149e-7■■■■□ 20.7
XRN2Q9H0D6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.346e-7■■■■□ 20.7
XRN2Q9H0D6 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.992e-7■■■■□ 20.7
XRN2Q9H0D6 NCL-207ENST00000461347 3967 ntTSL 214.16□□□□□ -0.143e-6■■■■□ 20.7
XRN2Q9H0D6 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.473e-6■■■■□ 20.7
XRN2Q9H0D6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.68■■■□□ 2.023e-7■■■■□ 20.7
XRN2Q9H0D6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.883e-7■■■■□ 20.7
XRN2Q9H0D6 CUL4A-208ENST00000474116 866 ntTSL 221.65■■□□□ 1.063e-7■■■■□ 20.7
XRN2Q9H0D6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.4■□□□□ 0.069e-7■■■■□ 20.7
XRN2Q9H0D6 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.439e-7■■■■□ 20.7
XRN2Q9H0D6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.282e-6■■■■□ 20.7
XRN2Q9H0D6 MAPK8IP3-213ENST00000568271 752 ntTSL 517.42■□□□□ 0.382e-7■■■■□ 20.7
XRN2Q9H0D6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.073e-7■■■■□ 20.6
XRN2Q9H0D6 ZNF444-203ENST00000587195 571 ntTSL 427.06■■□□□ 1.922e-7■■■■□ 20.6
XRN2Q9H0D6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.492e-7■■■■□ 20.6
XRN2Q9H0D6 ZNF444-206ENST00000587664 568 ntTSL 322.5■■□□□ 1.192e-7■■■■□ 20.6
XRN2Q9H0D6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.132e-7■■■■□ 20.6
XRN2Q9H0D6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.617e-7■■■■□ 20.6
XRN2Q9H0D6 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.437e-7■■■■□ 20.6
XRN2Q9H0D6 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.764e-6■■■■□ 20.6
XRN2Q9H0D6 ATXN7L3-208ENST00000590169 593 ntTSL 49.01□□□□□ -0.974e-6■■■■□ 20.6
XRN2Q9H0D6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.84■■□□□ 1.737e-7■■■■□ 20.6
XRN2Q9H0D6 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.23■□□□□ 0.997e-7■■■■□ 20.6
XRN2Q9H0D6 NME4-208ENST00000454619 719 ntTSL 517.67■□□□□ 0.427e-7■■■■□ 20.6
XRN2Q9H0D6 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.28■□□□□ 0.27e-7■■■■□ 20.6
XRN2Q9H0D6 ATXN2-204ENST00000392645 2842 ntTSL 214.43□□□□□ -0.18e-13■■■■□ 20.6
XRN2Q9H0D6 SHANK2-220ENST00000608988 1879 ntTSL 521.76■■□□□ 1.072e-6■■■■□ 20.6
XRN2Q9H0D6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.09■□□□□ 0.811e-7■■■■□ 20.6
XRN2Q9H0D6 ARHGAP5-208ENST00000555814 583 ntTSL 49.38□□□□□ -0.911e-7■■■■□ 20.6
XRN2Q9H0D6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.41e-7■■■■□ 20.6
XRN2Q9H0D6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.491e-7■■■■□ 20.6
XRN2Q9H0D6 CAMK2N1-202ENST00000489020 812 ntTSL 317.67■□□□□ 0.424e-25■■■■□ 20.6
XRN2Q9H0D6 LTBR-208ENST00000541005 583 ntTSL 215.39■□□□□ 0.054e-6■■■■□ 20.6
XRN2Q9H0D6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.9□□□□□ -0.028e-7■■■■□ 20.6
XRN2Q9H0D6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.038e-7■■■■□ 20.6
Retrieved 100 of 21,068 protein–RNA pairs in 96.8 ms