RNA–Protein interactions for RNA: ENST00000503876.5

RUFY3-206, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 4

Gene RUFY3, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-206ENST00000503876 AEBP2Q6ZN18 517 aaPredicted RBP29.58■■■□□ 2.33
RUFY3-206ENST00000503876 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
RUFY3-206ENST00000503876 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
RUFY3-206ENST00000503876 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
RUFY3-206ENST00000503876 PLPPR3Q6T4P5 718 aa23.67■■□□□ 1.38
RUFY3-206ENST00000503876 FOXD1Q16676 465 aa23.21■■□□□ 1.31
RUFY3-206ENST00000503876 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
RUFY3-206ENST00000503876 ADRA2BP18089 450 aa22.48■■□□□ 1.19
RUFY3-206ENST00000503876 PIAS4Q8N2W9 510 aaPredicted RBP21.86■■□□□ 1.09
RUFY3-206ENST00000503876 MSH5O43196 834 aa21.28■■□□□ 1
RUFY3-206ENST00000503876 PPP4R3CPQ6ZMV5 832 aa20.9■□□□□ 0.94
RUFY3-206ENST00000503876 KCNA4P22459 653 aa20.68■□□□□ 0.9
RUFY3-206ENST00000503876 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.87
RUFY3-206ENST00000503876 NCBP3Q53F19 620 aaKnown RBP20.37■□□□□ 0.85
RUFY3-206ENST00000503876 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
RUFY3-206ENST00000503876 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
RUFY3-206ENST00000503876 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
RUFY3-206ENST00000503876 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
RUFY3-206ENST00000503876 RNF216Q9NWF9 866 aaPredicted RBP19.84■□□□□ 0.77
RUFY3-206ENST00000503876 HOXD11P31277 338 aaPredicted RBP19.74■□□□□ 0.75
RUFY3-206ENST00000503876 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
RUFY3-206ENST00000503876 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
RUFY3-206ENST00000503876 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
RUFY3-206ENST00000503876 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
RUFY3-206ENST00000503876 ZBTB22O15209 634 aa19.08■□□□□ 0.64
RUFY3-206ENST00000503876 SLC4A2P04920 1241 aa19■□□□□ 0.63
RUFY3-206ENST00000503876 POTEDQ86YR6 584 aa18.99■□□□□ 0.63
RUFY3-206ENST00000503876 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
RUFY3-206ENST00000503876 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
RUFY3-206ENST00000503876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.58
RUFY3-206ENST00000503876 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
RUFY3-206ENST00000503876 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
RUFY3-206ENST00000503876 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
RUFY3-206ENST00000503876 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
RUFY3-206ENST00000503876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.52
RUFY3-206ENST00000503876 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.52
RUFY3-206ENST00000503876 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
RUFY3-206ENST00000503876 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
RUFY3-206ENST00000503876 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.48
RUFY3-206ENST00000503876 APLP2Q06481 763 aa18■□□□□ 0.47
RUFY3-206ENST00000503876 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
RUFY3-206ENST00000503876 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
RUFY3-206ENST00000503876 CAPN15O75808 1086 aa17.71■□□□□ 0.43
RUFY3-206ENST00000503876 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
RUFY3-206ENST00000503876 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
RUFY3-206ENST00000503876 POLA2Q14181 598 aa17.51■□□□□ 0.39
RUFY3-206ENST00000503876 DSG3P32926 999 aa17.48■□□□□ 0.39
RUFY3-206ENST00000503876 ABCB7O75027 752 aa17.4■□□□□ 0.38
RUFY3-206ENST00000503876 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
RUFY3-206ENST00000503876 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
RUFY3-206ENST00000503876 FBLN2P98095 1184 aa17.23■□□□□ 0.35
RUFY3-206ENST00000503876 FKBP8Q14318 412 aa17.18■□□□□ 0.34
RUFY3-206ENST00000503876 SPDYE4A6NLX3 237 aa16.98■□□□□ 0.31
RUFY3-206ENST00000503876 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
RUFY3-206ENST00000503876 PROM2Q8N271 834 aa16.88■□□□□ 0.29
RUFY3-206ENST00000503876 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
RUFY3-206ENST00000503876 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
RUFY3-206ENST00000503876 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
RUFY3-206ENST00000503876 SSUH2Q9Y2M2 353 aa16.76■□□□□ 0.27
RUFY3-206ENST00000503876 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
RUFY3-206ENST00000503876 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
RUFY3-206ENST00000503876 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
RUFY3-206ENST00000503876 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
RUFY3-206ENST00000503876 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
RUFY3-206ENST00000503876 VASPP50552 380 aaPredicted RBP16.33■□□□□ 0.2
RUFY3-206ENST00000503876 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
RUFY3-206ENST00000503876 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
RUFY3-206ENST00000503876 SPDYE1Q8NFV5 336 aaPredicted RBP16.24■□□□□ 0.19
RUFY3-206ENST00000503876 IFNLR1Q8IU57 520 aaPredicted RBP16.15■□□□□ 0.18
RUFY3-206ENST00000503876 PITPNM1O00562 1244 aa16.11■□□□□ 0.17
RUFY3-206ENST00000503876 AMER1Q5JTC6 1135 aaPredicted RBP16.07■□□□□ 0.16
RUFY3-206ENST00000503876 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
RUFY3-206ENST00000503876 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
RUFY3-206ENST00000503876 MIER1Q8N108 512 aa16.03■□□□□ 0.16
RUFY3-206ENST00000503876 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
RUFY3-206ENST00000503876 PRR29P0C7W0 189 aa16■□□□□ 0.15
RUFY3-206ENST00000503876 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
RUFY3-206ENST00000503876 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
RUFY3-206ENST00000503876 PLEKHG5O94827 1062 aa15.88■□□□□ 0.13
RUFY3-206ENST00000503876 SPOCK2Q92563 424 aa15.88■□□□□ 0.13
RUFY3-206ENST00000503876 MNX1P50219 401 aaPredicted RBP15.86■□□□□ 0.13
RUFY3-206ENST00000503876 ZBTB47Q9UFB7 747 aaPredicted RBP15.86■□□□□ 0.13
RUFY3-206ENST00000503876 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.12
RUFY3-206ENST00000503876 CHRDL2Q6WN34 429 aa15.82■□□□□ 0.12
RUFY3-206ENST00000503876 NUBP1P53384 320 aa15.72■□□□□ 0.11
RUFY3-206ENST00000503876 PKD2Q13563 968 aa15.72■□□□□ 0.11
RUFY3-206ENST00000503876 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
RUFY3-206ENST00000503876 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
RUFY3-206ENST00000503876 PRKAR2AP13861 404 aaKnown RBP15.67■□□□□ 0.1
RUFY3-206ENST00000503876 FARP1Q9Y4F1 1045 aaPredicted RBP15.64■□□□□ 0.09
RUFY3-206ENST00000503876 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
RUFY3-206ENST00000503876 RASEFQ8IZ41 740 aa15.56■□□□□ 0.08
RUFY3-206ENST00000503876 GSE1Q14687 1217 aa15.53■□□□□ 0.08
RUFY3-206ENST00000503876 CIZ1Q9ULV3 898 aaPredicted RBP15.51■□□□□ 0.07
RUFY3-206ENST00000503876 FAM212AQ96EL1 285 aa15.48■□□□□ 0.07
RUFY3-206ENST00000503876 ECM2O94769 699 aaPredicted RBP15.47■□□□□ 0.07
RUFY3-206ENST00000503876 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
RUFY3-206ENST00000503876 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
RUFY3-206ENST00000503876 CHRM1P11229 460 aaPredicted RBP15.39■□□□□ 0.05
RUFY3-206ENST00000503876 RGL2O15211 777 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms