RNA–Protein interactions for RNA: ENST00000370677.4

LAMA5-202, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-202ENST00000370677 NISCHQ9Y2I1 1504 aa46.2■■■■■ 4.99
LAMA5-202ENST00000370677 CCDC180Q9P1Z9 1646 aa40.6■■■■■ 4.09
LAMA5-202ENST00000370677 ABCC9O60706 1549 aa38.76■■■■□ 3.8
LAMA5-202ENST00000370677 ZCCHC6Q5VYS8 1495 aaKnown RBP38.74■■■■□ 3.79
LAMA5-202ENST00000370677 DCAF1Q9Y4B6 1507 aa38.29■■■■□ 3.72
LAMA5-202ENST00000370677 DCAF8L2P0C7V8 631 aa38.07■■■■□ 3.69
LAMA5-202ENST00000370677 MYO15BQ96JP2 1530 aa38.03■■■■□ 3.68
LAMA5-202ENST00000370677 NACADO15069 1562 aa37.87■■■■□ 3.65
LAMA5-202ENST00000370677 RB1CC1Q8TDY2 1594 aa37.64■■■■□ 3.62
LAMA5-202ENST00000370677 SHROOM4Q9ULL8 1493 aa37.18■■■■□ 3.54
LAMA5-202ENST00000370677 SCRIBQ14160 1630 aa37.12■■■■□ 3.53
LAMA5-202ENST00000370677 UNC13AQ9UPW8 1703 aa36.86■■■■□ 3.49
LAMA5-202ENST00000370677 BICRAQ9NZM4 1560 aa36.49■■■■□ 3.43
LAMA5-202ENST00000370677 PABPN1Q86U42 306 aaKnown RBP eCLIP36.36■■■■□ 3.41
LAMA5-202ENST00000370677 CECR2Q9BXF3 1484 aa35.85■■■■□ 3.33
LAMA5-202ENST00000370677 BAZ1AQ9NRL2 1556 aaPredicted RBP35.73■■■■□ 3.31
LAMA5-202ENST00000370677 MROH2BQ7Z745 1585 aa35.63■■■■□ 3.29
LAMA5-202ENST00000370677 RSF1Q96T23 1441 aaPredicted RBP35.62■■■■□ 3.29
LAMA5-202ENST00000370677 SMARCA4P51532 1647 aa35.62■■■■□ 3.29
LAMA5-202ENST00000370677 SUPT5HO00267 1087 aaKnown RBP35.55■■■■□ 3.28
LAMA5-202ENST00000370677 EIF4G1Q04637 1599 aaKnown RBP35.41■■■■□ 3.26
LAMA5-202ENST00000370677 WIZO95785 1651 aa35.33■■■■□ 3.25
LAMA5-202ENST00000370677 PEG3Q9GZU2 1588 aa35.27■■■■□ 3.24
LAMA5-202ENST00000370677 SMARCA2P51531 1590 aa35.14■■■■□ 3.22
LAMA5-202ENST00000370677 ATAD2BQ9ULI0 1458 aa35.11■■■■□ 3.21
LAMA5-202ENST00000370677 CC2D2AQ9P2K1 1620 aa35.09■■■■□ 3.21
LAMA5-202ENST00000370677 DNAJC5BQ9UF47 199 aa35.05■■■■□ 3.2
LAMA5-202ENST00000370677 TOP2AP11388 1531 aaKnown RBP35■■■■□ 3.19
LAMA5-202ENST00000370677 NCAPD3P42695 1498 aa34.92■■■■□ 3.18
LAMA5-202ENST00000370677 BAZ1BQ9UIG0 1483 aaKnown RBP34.89■■■■□ 3.18
LAMA5-202ENST00000370677 HMGXB3Q12766 1538 aa34.88■■■■□ 3.17
LAMA5-202ENST00000370677 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
LAMA5-202ENST00000370677 CFTRP13569 1480 aa34.02■■■■□ 3.04
LAMA5-202ENST00000370677 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
LAMA5-202ENST00000370677 PRDM2Q13029 1718 aa33.91■■■■□ 3.02
LAMA5-202ENST00000370677 CHIC1Q5VXU3 224 aa33.86■■■■□ 3.01
LAMA5-202ENST00000370677 LAMC3Q9Y6N6 1575 aa33.84■■■■□ 3.01
LAMA5-202ENST00000370677 NESP48681 1621 aa33.8■■■■□ 3
LAMA5-202ENST00000370677 ABCC8Q09428 1581 aa33.68■■■□□ 2.98
LAMA5-202ENST00000370677 FANCD2Q9BXW9 1451 aa33.57■■■□□ 2.96
LAMA5-202ENST00000370677 WRNQ14191 1432 aaPredicted RBP eCLIP33.56■■■□□ 2.96
LAMA5-202ENST00000370677 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
LAMA5-202ENST00000370677 TRIM41Q8WV44 630 aa33.52■■■□□ 2.96
LAMA5-202ENST00000370677 SYNJ1O43426 1573 aa33.44■■■□□ 2.94
LAMA5-202ENST00000370677 CEP164Q9UPV0 1460 aa33.43■■■□□ 2.94
LAMA5-202ENST00000370677 KIF21AQ7Z4S6 1674 aa33.41■■■□□ 2.94
LAMA5-202ENST00000370677 TOP2BQ02880 1626 aa33.39■■■□□ 2.94
LAMA5-202ENST00000370677 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.94
LAMA5-202ENST00000370677 CUX1P39880 1505 aa33.35■■■□□ 2.93
LAMA5-202ENST00000370677 ERCC6Q03468 1493 aa33.27■■■□□ 2.92
LAMA5-202ENST00000370677 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
LAMA5-202ENST00000370677 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
LAMA5-202ENST00000370677 TOPBP1Q92547 1522 aa33.18■■■□□ 2.9
LAMA5-202ENST00000370677 MRC2Q9UBG0 1479 aa33.14■■■□□ 2.9
LAMA5-202ENST00000370677 THOC2Q8NI27 1593 aaKnown RBP33.11■■■□□ 2.89
LAMA5-202ENST00000370677 FGD5Q6ZNL6 1462 aa33.06■■■□□ 2.88
LAMA5-202ENST00000370677 WDR62O43379 1518 aa33.02■■■□□ 2.88
LAMA5-202ENST00000370677 POLA1P09884 1462 aaPredicted RBP32.98■■■□□ 2.87
LAMA5-202ENST00000370677 SOGA1O94964 1423 aa32.94■■■□□ 2.86
LAMA5-202ENST00000370677 EEA1Q15075 1411 aa32.9■■■□□ 2.86
LAMA5-202ENST00000370677 RUSC2Q8N2Y8 1516 aa32.82■■■□□ 2.84
LAMA5-202ENST00000370677 ABCA10Q8WWZ4 1543 aa32.8■■■□□ 2.84
LAMA5-202ENST00000370677 RAD54L2Q9Y4B4 1467 aa32.8■■■□□ 2.84
LAMA5-202ENST00000370677 FAM9AQ8IZU1 332 aaPredicted RBP32.8■■■□□ 2.84
LAMA5-202ENST00000370677 WDR97A6NE52 1622 aa32.78■■■□□ 2.84
LAMA5-202ENST00000370677 KIF27Q86VH2 1401 aa32.76■■■□□ 2.83
LAMA5-202ENST00000370677 CUX2O14529 1486 aa32.75■■■□□ 2.83
LAMA5-202ENST00000370677 TARBP1Q13395 1621 aaKnown RBP32.75■■■□□ 2.83
LAMA5-202ENST00000370677 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
LAMA5-202ENST00000370677 CSRNP3Q8WYN3 585 aa32.66■■■□□ 2.82
LAMA5-202ENST00000370677 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
LAMA5-202ENST00000370677 TDRD9Q8NDG6 1382 aaKnown RBP32.5■■■□□ 2.79
LAMA5-202ENST00000370677 KIF21BO75037 1637 aa32.5■■■□□ 2.79
LAMA5-202ENST00000370677 GAPVD1Q14C86 1478 aa32.49■■■□□ 2.79
LAMA5-202ENST00000370677 IGF1RP08069 1367 aa32.48■■■□□ 2.79
LAMA5-202ENST00000370677 LOC105371045A0A1W2PR82 267 aa32.46■■■□□ 2.79
LAMA5-202ENST00000370677 ZNF608Q9ULD9 1512 aaPredicted RBP32.44■■■□□ 2.78
LAMA5-202ENST00000370677 PRXQ9BXM0 1461 aa32.43■■■□□ 2.78
LAMA5-202ENST00000370677 ERICH3Q5RHP9 1530 aa32.43■■■□□ 2.78
LAMA5-202ENST00000370677 PBRM1Q86U86 1689 aa32.4■■■□□ 2.78
LAMA5-202ENST00000370677 AQRO60306 1485 aaKnown RBP eCLIP32.39■■■□□ 2.781e-7■■■■■ 38
LAMA5-202ENST00000370677 EIF4G3O43432 1585 aaKnown RBP32.39■■■□□ 2.78
LAMA5-202ENST00000370677 GOLGA3Q08378 1498 aa32.38■■■□□ 2.77
LAMA5-202ENST00000370677 CUL7Q14999 1698 aa32.37■■■□□ 2.77
LAMA5-202ENST00000370677 GRIN2BQ13224 1484 aa32.32■■■□□ 2.76
LAMA5-202ENST00000370677 RAPGEF2Q9Y4G8 1499 aa32.31■■■□□ 2.76
LAMA5-202ENST00000370677 CARMIL1Q5VZK9 1371 aa32.31■■■□□ 2.76
LAMA5-202ENST00000370677 EHMT2Q96KQ7 1210 aa32.27■■■□□ 2.76
LAMA5-202ENST00000370677 ADAMTS12P58397 1594 aa32.18■■■□□ 2.74
LAMA5-202ENST00000370677 TNIKQ9UKE5 1360 aa32.18■■■□□ 2.74
LAMA5-202ENST00000370677 UBTFP17480 764 aaKnown RBP32.15■■■□□ 2.74
LAMA5-202ENST00000370677 FHAD1B1AJZ9 1412 aa32.15■■■□□ 2.74
LAMA5-202ENST00000370677 SNAPC4Q5SXM2 1469 aa32.13■■■□□ 2.73
LAMA5-202ENST00000370677 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
LAMA5-202ENST00000370677 SYNJ2O15056 1496 aa31.99■■■□□ 2.71
LAMA5-202ENST00000370677 CEP162Q5TB80 1403 aa31.95■■■□□ 2.71
LAMA5-202ENST00000370677 CTTNBP2Q8WZ74 1663 aa31.94■■■□□ 2.7
LAMA5-202ENST00000370677 GRIN2AQ12879 1464 aa31.93■■■□□ 2.7
LAMA5-202ENST00000370677 CHMP7Q8WUX9 453 aaPredicted RBP31.85■■■□□ 2.69
LAMA5-202ENST00000370677 CLIP1P30622 1438 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms