RNA–Protein interactions for RNA: ENST00000485984.1

ARHGEF16-207, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 2

Gene ARHGEF16, Length 2,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-207ENST00000485984 NISCHQ9Y2I1 1504 aa36.05■■■■□ 3.36
ARHGEF16-207ENST00000485984 SHROOM4Q9ULL8 1493 aa30.98■■■□□ 2.55
ARHGEF16-207ENST00000485984 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
ARHGEF16-207ENST00000485984 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
ARHGEF16-207ENST00000485984 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
ARHGEF16-207ENST00000485984 DCAF8L2P0C7V8 631 aa30■■■□□ 2.39
ARHGEF16-207ENST00000485984 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
ARHGEF16-207ENST00000485984 MYO15BQ96JP2 1530 aa29.56■■■□□ 2.32
ARHGEF16-207ENST00000485984 DCAF1Q9Y4B6 1507 aa29.53■■■□□ 2.32
ARHGEF16-207ENST00000485984 HRCP23327 699 aa29.04■■■□□ 2.24
ARHGEF16-207ENST00000485984 PCGF6Q9BYE7 350 aa28.96■■■□□ 2.23
ARHGEF16-207ENST00000485984 ABCC9O60706 1549 aa28.84■■■□□ 2.21
ARHGEF16-207ENST00000485984 LOC105371045A0A1W2PR82 267 aa28.81■■■□□ 2.2
ARHGEF16-207ENST00000485984 SCRIBQ14160 1630 aa28.74■■■□□ 2.19
ARHGEF16-207ENST00000485984 RSF1Q96T23 1441 aaPredicted RBP28.61■■■□□ 2.17
ARHGEF16-207ENST00000485984 PPARGC1BQ86YN6 1023 aaKnown RBP28.43■■■□□ 2.14
ARHGEF16-207ENST00000485984 NACADO15069 1562 aa28.36■■■□□ 2.13
ARHGEF16-207ENST00000485984 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
ARHGEF16-207ENST00000485984 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
ARHGEF16-207ENST00000485984 TRIM26Q12899 539 aaPredicted RBP28.34■■■□□ 2.13
ARHGEF16-207ENST00000485984 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
ARHGEF16-207ENST00000485984 CECR2Q9BXF3 1484 aa28.13■■■□□ 2.09
ARHGEF16-207ENST00000485984 MROH2BQ7Z745 1585 aa28.05■■■□□ 2.08
ARHGEF16-207ENST00000485984 EHMT2Q96KQ7 1210 aa27.96■■■□□ 2.07
ARHGEF16-207ENST00000485984 WIZO95785 1651 aa27.93■■■□□ 2.06
ARHGEF16-207ENST00000485984 ZEB1P37275 1124 aaPredicted RBP27.8■■■□□ 2.04
ARHGEF16-207ENST00000485984 BAZ1AQ9NRL2 1556 aaPredicted RBP27.75■■■□□ 2.03
ARHGEF16-207ENST00000485984 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.01
ARHGEF16-207ENST00000485984 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
ARHGEF16-207ENST00000485984 TOP2AP11388 1531 aaKnown RBP27.47■■□□□ 1.99
ARHGEF16-207ENST00000485984 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
ARHGEF16-207ENST00000485984 ABCC8Q09428 1581 aa27.39■■□□□ 1.97
ARHGEF16-207ENST00000485984 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
ARHGEF16-207ENST00000485984 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
ARHGEF16-207ENST00000485984 BICRAQ9NZM4 1560 aa27.29■■□□□ 1.96
ARHGEF16-207ENST00000485984 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.958e-8■■■□□ 14.7
ARHGEF16-207ENST00000485984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.21■■□□□ 1.95
ARHGEF16-207ENST00000485984 CCER1Q8TC90 406 aaPredicted RBP27.17■■□□□ 1.94
ARHGEF16-207ENST00000485984 SOGA1O94964 1423 aa27.16■■□□□ 1.94
ARHGEF16-207ENST00000485984 CEP162Q5TB80 1403 aa27.13■■□□□ 1.93
ARHGEF16-207ENST00000485984 TTBK1Q5TCY1 1321 aaPredicted RBP27.11■■□□□ 1.93
ARHGEF16-207ENST00000485984 WRNQ14191 1432 aaPredicted RBP eCLIP27.09■■□□□ 1.93
ARHGEF16-207ENST00000485984 TNIKQ9UKE5 1360 aa27.05■■□□□ 1.92
ARHGEF16-207ENST00000485984 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
ARHGEF16-207ENST00000485984 EEA1Q15075 1411 aa27.03■■□□□ 1.92
ARHGEF16-207ENST00000485984 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
ARHGEF16-207ENST00000485984 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
ARHGEF16-207ENST00000485984 GOLGA3Q08378 1498 aa26.88■■□□□ 1.89
ARHGEF16-207ENST00000485984 SCAF1Q9H7N4 1312 aaKnown RBP26.86■■□□□ 1.89
ARHGEF16-207ENST00000485984 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
ARHGEF16-207ENST00000485984 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
ARHGEF16-207ENST00000485984 CEP164Q9UPV0 1460 aa26.7■■□□□ 1.87
ARHGEF16-207ENST00000485984 DIEXFQ68CQ4 756 aaKnown RBP26.7■■□□□ 1.86
ARHGEF16-207ENST00000485984 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
ARHGEF16-207ENST00000485984 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
ARHGEF16-207ENST00000485984 KIF21BO75037 1637 aa26.64■■□□□ 1.86
ARHGEF16-207ENST00000485984 CLIP1P30622 1438 aa26.59■■□□□ 1.85
ARHGEF16-207ENST00000485984 ACIN1Q9UKV3 1341 aaKnown RBP26.57■■□□□ 1.84
ARHGEF16-207ENST00000485984 NEUROD1Q13562 356 aa26.52■■□□□ 1.84
ARHGEF16-207ENST00000485984 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.84
ARHGEF16-207ENST00000485984 PELP1Q8IZL8 1130 aaKnown RBP26.49■■□□□ 1.83
ARHGEF16-207ENST00000485984 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
ARHGEF16-207ENST00000485984 VPS8Q8N3P4 1428 aa26.48■■□□□ 1.83
ARHGEF16-207ENST00000485984 RANGAP1P46060 587 aaPredicted RBP26.48■■□□□ 1.83
ARHGEF16-207ENST00000485984 APLP2Q06481 763 aa26.47■■□□□ 1.83
ARHGEF16-207ENST00000485984 ZNF316A6NFI3 1004 aaPredicted RBP26.45■■□□□ 1.82
ARHGEF16-207ENST00000485984 CENPBP07199 599 aaPredicted RBP26.44■■□□□ 1.82
ARHGEF16-207ENST00000485984 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
ARHGEF16-207ENST00000485984 GTF3C3Q9Y5Q9 886 aa26.29■■□□□ 1.8
ARHGEF16-207ENST00000485984 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
ARHGEF16-207ENST00000485984 NCAPD3P42695 1498 aa26.22■■□□□ 1.79
ARHGEF16-207ENST00000485984 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
ARHGEF16-207ENST00000485984 ERICH3Q5RHP9 1530 aa26.18■■□□□ 1.78
ARHGEF16-207ENST00000485984 PRXQ9BXM0 1461 aa26.17■■□□□ 1.78
ARHGEF16-207ENST00000485984 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.77
ARHGEF16-207ENST00000485984 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
ARHGEF16-207ENST00000485984 CUX1P39880 1505 aa26.1■■□□□ 1.77
ARHGEF16-207ENST00000485984 MIER1Q8N108 512 aa26.09■■□□□ 1.77
ARHGEF16-207ENST00000485984 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
ARHGEF16-207ENST00000485984 KANK4Q5T7N3 995 aaPredicted RBP26.03■■□□□ 1.76
ARHGEF16-207ENST00000485984 CFTRP13569 1480 aa25.96■■□□□ 1.75
ARHGEF16-207ENST00000485984 DHX57Q6P158 1386 aaKnown RBP25.95■■□□□ 1.74
ARHGEF16-207ENST00000485984 CLSPNQ9HAW4 1339 aa25.93■■□□□ 1.74
ARHGEF16-207ENST00000485984 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
ARHGEF16-207ENST00000485984 RRBP1Q9P2E9 1410 aaKnown RBP25.86■■□□□ 1.73
ARHGEF16-207ENST00000485984 ARHGAP35Q9NRY4 1499 aa25.86■■□□□ 1.73
ARHGEF16-207ENST00000485984 CCNB3Q8WWL7 1395 aa25.79■■□□□ 1.72
ARHGEF16-207ENST00000485984 CUX2O14529 1486 aa25.78■■□□□ 1.72
ARHGEF16-207ENST00000485984 ITGAEP38570 1179 aa25.77■■□□□ 1.72
ARHGEF16-207ENST00000485984 PRDM2Q13029 1718 aa25.75■■□□□ 1.71
ARHGEF16-207ENST00000485984 IGF1RP08069 1367 aa25.74■■□□□ 1.71
ARHGEF16-207ENST00000485984 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
ARHGEF16-207ENST00000485984 CARMIL1Q5VZK9 1371 aa25.65■■□□□ 1.7
ARHGEF16-207ENST00000485984 FGD5Q6ZNL6 1462 aa25.63■■□□□ 1.69
ARHGEF16-207ENST00000485984 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
ARHGEF16-207ENST00000485984 RAB3GAP2Q9H2M9 1393 aa25.58■■□□□ 1.69
ARHGEF16-207ENST00000485984 MAP3K1Q13233 1512 aa25.56■■□□□ 1.68
ARHGEF16-207ENST00000485984 LRRC9Q6ZRR7 1453 aa25.52■■□□□ 1.68
ARHGEF16-207ENST00000485984 P3H3Q8IVL6 736 aa25.51■■□□□ 1.67
ARHGEF16-207ENST00000485984 ATP1B4Q9UN42 357 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms