RNA–Protein interactions for RNA: ENST00000467160.1

ATP13A1-204, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,431 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-204ENST00000467160 NISCHQ9Y2I1 1504 aa38.56■■■■□ 3.76
ATP13A1-204ENST00000467160 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
ATP13A1-204ENST00000467160 ZCCHC6Q5VYS8 1495 aaKnown RBP32.53■■■□□ 2.8
ATP13A1-204ENST00000467160 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
ATP13A1-204ENST00000467160 DCAF8L2P0C7V8 631 aa32.01■■■□□ 2.71
ATP13A1-204ENST00000467160 SUPT5HO00267 1087 aaKnown RBP31.74■■■□□ 2.67
ATP13A1-204ENST00000467160 ABCC9O60706 1549 aa31.7■■■□□ 2.66
ATP13A1-204ENST00000467160 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
ATP13A1-204ENST00000467160 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
ATP13A1-204ENST00000467160 NACADO15069 1562 aa30.79■■■□□ 2.52
ATP13A1-204ENST00000467160 SCRIBQ14160 1630 aa30.77■■■□□ 2.52
ATP13A1-204ENST00000467160 CHIC1Q5VXU3 224 aa30.74■■■□□ 2.51
ATP13A1-204ENST00000467160 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
ATP13A1-204ENST00000467160 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
ATP13A1-204ENST00000467160 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
ATP13A1-204ENST00000467160 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
ATP13A1-204ENST00000467160 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.395e-7■■■□□ 14.6
ATP13A1-204ENST00000467160 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
ATP13A1-204ENST00000467160 LOC105371045A0A1W2PR82 267 aa29.78■■■□□ 2.36
ATP13A1-204ENST00000467160 WIZO95785 1651 aa29.76■■■□□ 2.35
ATP13A1-204ENST00000467160 BICRAQ9NZM4 1560 aa29.74■■■□□ 2.35
ATP13A1-204ENST00000467160 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
ATP13A1-204ENST00000467160 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
ATP13A1-204ENST00000467160 SMARCA4P51532 1647 aa29.43■■■□□ 2.3
ATP13A1-204ENST00000467160 PCGF6Q9BYE7 350 aa29.36■■■□□ 2.29
ATP13A1-204ENST00000467160 FAM9AQ8IZU1 332 aaPredicted RBP29.32■■■□□ 2.28
ATP13A1-204ENST00000467160 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
ATP13A1-204ENST00000467160 EIF4G1Q04637 1599 aaKnown RBP29.19■■■□□ 2.26
ATP13A1-204ENST00000467160 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
ATP13A1-204ENST00000467160 HRCP23327 699 aa29.13■■■□□ 2.25
ATP13A1-204ENST00000467160 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
ATP13A1-204ENST00000467160 EHMT2Q96KQ7 1210 aa29.03■■■□□ 2.24
ATP13A1-204ENST00000467160 TRIM26Q12899 539 aaPredicted RBP28.95■■■□□ 2.22
ATP13A1-204ENST00000467160 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
ATP13A1-204ENST00000467160 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
ATP13A1-204ENST00000467160 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
ATP13A1-204ENST00000467160 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
ATP13A1-204ENST00000467160 SOGA1O94964 1423 aa28.61■■■□□ 2.17
ATP13A1-204ENST00000467160 CC2D2AQ9P2K1 1620 aa28.56■■■□□ 2.16
ATP13A1-204ENST00000467160 PPARGC1BQ86YN6 1023 aaKnown RBP28.54■■■□□ 2.16
ATP13A1-204ENST00000467160 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
ATP13A1-204ENST00000467160 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
ATP13A1-204ENST00000467160 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
ATP13A1-204ENST00000467160 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.15
ATP13A1-204ENST00000467160 EEA1Q15075 1411 aa28.45■■■□□ 2.15
ATP13A1-204ENST00000467160 SYNJ1O43426 1573 aa28.39■■■□□ 2.13
ATP13A1-204ENST00000467160 HMGXB3Q12766 1538 aa28.34■■■□□ 2.13
ATP13A1-204ENST00000467160 TNIKQ9UKE5 1360 aa28.33■■■□□ 2.13
ATP13A1-204ENST00000467160 DNAJC5BQ9UF47 199 aa28.31■■■□□ 2.12
ATP13A1-204ENST00000467160 CEP162Q5TB80 1403 aa28.3■■■□□ 2.12
ATP13A1-204ENST00000467160 UBTFP17480 764 aaKnown RBP28.28■■■□□ 2.12
ATP13A1-204ENST00000467160 GOLGA3Q08378 1498 aa28.21■■■□□ 2.11
ATP13A1-204ENST00000467160 ZEB1P37275 1124 aaPredicted RBP28.16■■■□□ 2.1
ATP13A1-204ENST00000467160 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
ATP13A1-204ENST00000467160 CEP164Q9UPV0 1460 aa28.09■■■□□ 2.09
ATP13A1-204ENST00000467160 KIF21BO75037 1637 aa28.06■■■□□ 2.08
ATP13A1-204ENST00000467160 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.08
ATP13A1-204ENST00000467160 TTBK1Q5TCY1 1321 aaPredicted RBP27.99■■■□□ 2.07
ATP13A1-204ENST00000467160 CFTRP13569 1480 aa27.96■■■□□ 2.07
ATP13A1-204ENST00000467160 RAPGEF2Q9Y4G8 1499 aa27.92■■■□□ 2.06
ATP13A1-204ENST00000467160 CUX1P39880 1505 aa27.89■■■□□ 2.06
ATP13A1-204ENST00000467160 CLIP1P30622 1438 aa27.86■■■□□ 2.05
ATP13A1-204ENST00000467160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.82■■■□□ 2.04
ATP13A1-204ENST00000467160 CADPSQ9ULU8 1353 aa27.8■■■□□ 2.04
ATP13A1-204ENST00000467160 RANGAP1P46060 587 aaPredicted RBP27.75■■■□□ 2.03
ATP13A1-204ENST00000467160 NESP48681 1621 aa27.74■■■□□ 2.03
ATP13A1-204ENST00000467160 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
ATP13A1-204ENST00000467160 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
ATP13A1-204ENST00000467160 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
ATP13A1-204ENST00000467160 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.02
ATP13A1-204ENST00000467160 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
ATP13A1-204ENST00000467160 ERICH3Q5RHP9 1530 aa27.68■■■□□ 2.02
ATP13A1-204ENST00000467160 APLP2Q06481 763 aa27.58■■■□□ 2.01
ATP13A1-204ENST00000467160 LAMC3Q9Y6N6 1575 aa27.51■■□□□ 1.99
ATP13A1-204ENST00000467160 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
ATP13A1-204ENST00000467160 CUX2O14529 1486 aa27.48■■□□□ 1.99
ATP13A1-204ENST00000467160 ARAP1Q96P48 1450 aa27.46■■□□□ 1.99
ATP13A1-204ENST00000467160 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.98
ATP13A1-204ENST00000467160 IGF1RP08069 1367 aa27.44■■□□□ 1.98
ATP13A1-204ENST00000467160 HNRNPUL2Q1KMD3 747 aaKnown RBP27.4■■□□□ 1.98
ATP13A1-204ENST00000467160 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
ATP13A1-204ENST00000467160 CARMIL1Q5VZK9 1371 aa27.31■■□□□ 1.96
ATP13A1-204ENST00000467160 PELP1Q8IZL8 1130 aaKnown RBP27.29■■□□□ 1.96
ATP13A1-204ENST00000467160 ARHGAP35Q9NRY4 1499 aa27.29■■□□□ 1.96
ATP13A1-204ENST00000467160 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
ATP13A1-204ENST00000467160 KANK4Q5T7N3 995 aaPredicted RBP27.27■■□□□ 1.96
ATP13A1-204ENST00000467160 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
ATP13A1-204ENST00000467160 TOPBP1Q92547 1522 aa27.22■■□□□ 1.95
ATP13A1-204ENST00000467160 RAD54L2Q9Y4B4 1467 aa27.21■■□□□ 1.95
ATP13A1-204ENST00000467160 ERCC6Q03468 1493 aa27.18■■□□□ 1.94
ATP13A1-204ENST00000467160 POLA1P09884 1462 aaPredicted RBP27.17■■□□□ 1.94
ATP13A1-204ENST00000467160 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
ATP13A1-204ENST00000467160 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
ATP13A1-204ENST00000467160 MRC2Q9UBG0 1479 aa27.03■■□□□ 1.92
ATP13A1-204ENST00000467160 RRBP1Q9P2E9 1410 aaKnown RBP27.01■■□□□ 1.91
ATP13A1-204ENST00000467160 DIEXFQ68CQ4 756 aaKnown RBP26.98■■□□□ 1.91
ATP13A1-204ENST00000467160 P3H3Q8IVL6 736 aa26.97■■□□□ 1.91
ATP13A1-204ENST00000467160 CUL7Q14999 1698 aa26.94■■□□□ 1.9
ATP13A1-204ENST00000467160 TIAM1Q13009 1591 aa26.93■■□□□ 1.9
ATP13A1-204ENST00000467160 MAP3K1Q13233 1512 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms