RNA–Protein interactions for RNA: ENST00000481985.5

RPL3-215, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-215ENST00000481985 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
RPL3-215ENST00000481985 ABCC9O60706 1549 aa30.4■■■□□ 2.46
RPL3-215ENST00000481985 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
RPL3-215ENST00000481985 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
RPL3-215ENST00000481985 NACADO15069 1562 aa28.76■■■□□ 2.19
RPL3-215ENST00000481985 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.18
RPL3-215ENST00000481985 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
RPL3-215ENST00000481985 MYO15BQ96JP2 1530 aa28.41■■■□□ 2.14
RPL3-215ENST00000481985 PABPN1Q86U42 306 aaKnown RBP eCLIP28.36■■■□□ 2.13
RPL3-215ENST00000481985 UNC13AQ9UPW8 1703 aa28.12■■■□□ 2.09
RPL3-215ENST00000481985 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
RPL3-215ENST00000481985 ZCCHC6Q5VYS8 1495 aaKnown RBP28.03■■■□□ 2.08
RPL3-215ENST00000481985 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
RPL3-215ENST00000481985 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
RPL3-215ENST00000481985 SCRIBQ14160 1630 aa27.59■■■□□ 2.01
RPL3-215ENST00000481985 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
RPL3-215ENST00000481985 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
RPL3-215ENST00000481985 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.98
RPL3-215ENST00000481985 NCAPD3P42695 1498 aa26.61■■□□□ 1.85
RPL3-215ENST00000481985 ATAD2BQ9ULI0 1458 aa26.48■■□□□ 1.83
RPL3-215ENST00000481985 DNAJC5Q9H3Z4 198 aa26.39■■□□□ 1.82
RPL3-215ENST00000481985 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
RPL3-215ENST00000481985 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
RPL3-215ENST00000481985 HMGXB3Q12766 1538 aa26.33■■□□□ 1.81
RPL3-215ENST00000481985 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
RPL3-215ENST00000481985 CUX2O14529 1486 aa26.27■■□□□ 1.8
RPL3-215ENST00000481985 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
RPL3-215ENST00000481985 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
RPL3-215ENST00000481985 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
RPL3-215ENST00000481985 NESP48681 1621 aa26.1■■□□□ 1.77
RPL3-215ENST00000481985 MROH2BQ7Z745 1585 aa26.06■■□□□ 1.76
RPL3-215ENST00000481985 LAMC3Q9Y6N6 1575 aa25.94■■□□□ 1.74
RPL3-215ENST00000481985 PDS5BQ9NTI5 1447 aa25.86■■□□□ 1.73
RPL3-215ENST00000481985 CADPSQ9ULU8 1353 aa25.8■■□□□ 1.72
RPL3-215ENST00000481985 THOC2Q8NI27 1593 aaKnown RBP25.79■■□□□ 1.72
RPL3-215ENST00000481985 WIZO95785 1651 aa25.69■■□□□ 1.7
RPL3-215ENST00000481985 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
RPL3-215ENST00000481985 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
RPL3-215ENST00000481985 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
RPL3-215ENST00000481985 WDR62O43379 1518 aa25.5■■□□□ 1.67
RPL3-215ENST00000481985 CFTRP13569 1480 aa25.47■■□□□ 1.67
RPL3-215ENST00000481985 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
RPL3-215ENST00000481985 FANCD2Q9BXW9 1451 aa25.44■■□□□ 1.66
RPL3-215ENST00000481985 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
RPL3-215ENST00000481985 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
RPL3-215ENST00000481985 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
RPL3-215ENST00000481985 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
RPL3-215ENST00000481985 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
RPL3-215ENST00000481985 PRDM2Q13029 1718 aa25.02■■□□□ 1.6
RPL3-215ENST00000481985 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
RPL3-215ENST00000481985 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
RPL3-215ENST00000481985 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
RPL3-215ENST00000481985 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
RPL3-215ENST00000481985 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
RPL3-215ENST00000481985 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
RPL3-215ENST00000481985 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.554e-12■■■■■ 63.9
RPL3-215ENST00000481985 TARBP1Q13395 1621 aaKnown RBP24.69■■□□□ 1.54
RPL3-215ENST00000481985 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
RPL3-215ENST00000481985 RIMBP3CA6NJZ7 1639 aa24.65■■□□□ 1.54
RPL3-215ENST00000481985 RIMBP3BA6NNM3 1639 aa24.65■■□□□ 1.54
RPL3-215ENST00000481985 RIMBP3Q9UFD9 1639 aa24.65■■□□□ 1.54
RPL3-215ENST00000481985 SOGA1O94964 1423 aa24.63■■□□□ 1.53
RPL3-215ENST00000481985 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
RPL3-215ENST00000481985 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
RPL3-215ENST00000481985 FBLN2P98095 1184 aa24.58■■□□□ 1.53
RPL3-215ENST00000481985 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
RPL3-215ENST00000481985 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
RPL3-215ENST00000481985 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
RPL3-215ENST00000481985 WDR97A6NE52 1622 aa24.48■■□□□ 1.51
RPL3-215ENST00000481985 CHD1O14646 1710 aa24.48■■□□□ 1.51
RPL3-215ENST00000481985 CUX1P39880 1505 aa24.48■■□□□ 1.51
RPL3-215ENST00000481985 CHMP7Q8WUX9 453 aaPredicted RBP24.44■■□□□ 1.5
RPL3-215ENST00000481985 SNAPC4Q5SXM2 1469 aa24.42■■□□□ 1.5
RPL3-215ENST00000481985 GRIN2BQ13224 1484 aa24.4■■□□□ 1.5
RPL3-215ENST00000481985 MAGI1Q96QZ7 1491 aaPredicted RBP24.4■■□□□ 1.5
RPL3-215ENST00000481985 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
RPL3-215ENST00000481985 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
RPL3-215ENST00000481985 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
RPL3-215ENST00000481985 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
RPL3-215ENST00000481985 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
RPL3-215ENST00000481985 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
RPL3-215ENST00000481985 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
RPL3-215ENST00000481985 TRHP20396 242 aaPredicted RBP24.25■■□□□ 1.47
RPL3-215ENST00000481985 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
RPL3-215ENST00000481985 ABCA5Q8WWZ7 1642 aa24.16■■□□□ 1.46
RPL3-215ENST00000481985 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
RPL3-215ENST00000481985 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
RPL3-215ENST00000481985 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
RPL3-215ENST00000481985 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
RPL3-215ENST00000481985 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
RPL3-215ENST00000481985 NUP160Q12769 1436 aa24.01■■□□□ 1.43
RPL3-215ENST00000481985 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
RPL3-215ENST00000481985 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
RPL3-215ENST00000481985 CEP170Q5SW79 1584 aa23.92■■□□□ 1.42
RPL3-215ENST00000481985 ERCC6L2Q5T890 1561 aa23.87■■□□□ 1.41
RPL3-215ENST00000481985 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
RPL3-215ENST00000481985 JPH4Q96JJ6 628 aa23.83■■□□□ 1.41
RPL3-215ENST00000481985 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
RPL3-215ENST00000481985 IGF1RP08069 1367 aa23.71■■□□□ 1.39
RPL3-215ENST00000481985 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms