RNA–Protein interactions for RNA: ENST00000471290.1

RPL3-213, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 481 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-213ENST00000471290 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.08
RPL3-213ENST00000471290 ABCC9O60706 1549 aa25.92■■□□□ 1.74
RPL3-213ENST00000471290 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
RPL3-213ENST00000471290 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
RPL3-213ENST00000471290 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
RPL3-213ENST00000471290 NACADO15069 1562 aa24.17■■□□□ 1.46
RPL3-213ENST00000471290 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
RPL3-213ENST00000471290 UNC13AQ9UPW8 1703 aa23.85■■□□□ 1.41
RPL3-213ENST00000471290 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
RPL3-213ENST00000471290 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
RPL3-213ENST00000471290 MYO15BQ96JP2 1530 aa23.71■■□□□ 1.39
RPL3-213ENST00000471290 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
RPL3-213ENST00000471290 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
RPL3-213ENST00000471290 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
RPL3-213ENST00000471290 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
RPL3-213ENST00000471290 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
RPL3-213ENST00000471290 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
RPL3-213ENST00000471290 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
RPL3-213ENST00000471290 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
RPL3-213ENST00000471290 CUX2O14529 1486 aa22.6■■□□□ 1.21
RPL3-213ENST00000471290 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
RPL3-213ENST00000471290 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
RPL3-213ENST00000471290 ATAD2BQ9ULI0 1458 aa22.18■■□□□ 1.14
RPL3-213ENST00000471290 NESP48681 1621 aa22.12■■□□□ 1.13
RPL3-213ENST00000471290 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
RPL3-213ENST00000471290 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
RPL3-213ENST00000471290 THOC2Q8NI27 1593 aaKnown RBP22.01■■□□□ 1.11
RPL3-213ENST00000471290 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
RPL3-213ENST00000471290 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
RPL3-213ENST00000471290 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
RPL3-213ENST00000471290 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
RPL3-213ENST00000471290 PEG3Q9GZU2 1588 aa21.83■■□□□ 1.09
RPL3-213ENST00000471290 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
RPL3-213ENST00000471290 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
RPL3-213ENST00000471290 KIF21AQ7Z4S6 1674 aa21.78■■□□□ 1.08
RPL3-213ENST00000471290 MRC2Q9UBG0 1479 aa21.63■■□□□ 1.05
RPL3-213ENST00000471290 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
RPL3-213ENST00000471290 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
RPL3-213ENST00000471290 WDR62O43379 1518 aa21.6■■□□□ 1.05
RPL3-213ENST00000471290 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
RPL3-213ENST00000471290 CEP164Q9UPV0 1460 aa21.42■■□□□ 1.02
RPL3-213ENST00000471290 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
RPL3-213ENST00000471290 WIZO95785 1651 aa21.3■■□□□ 1
RPL3-213ENST00000471290 CFTRP13569 1480 aa21.27■■□□□ 1
RPL3-213ENST00000471290 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
RPL3-213ENST00000471290 RIMBP3BA6NNM3 1639 aa21.22■□□□□ 0.99
RPL3-213ENST00000471290 RIMBP3Q9UFD9 1639 aa21.22■□□□□ 0.99
RPL3-213ENST00000471290 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
RPL3-213ENST00000471290 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
RPL3-213ENST00000471290 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
RPL3-213ENST00000471290 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
RPL3-213ENST00000471290 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
RPL3-213ENST00000471290 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
RPL3-213ENST00000471290 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
RPL3-213ENST00000471290 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
RPL3-213ENST00000471290 TOPBP1Q92547 1522 aa20.89■□□□□ 0.94
RPL3-213ENST00000471290 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
RPL3-213ENST00000471290 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
RPL3-213ENST00000471290 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
RPL3-213ENST00000471290 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
RPL3-213ENST00000471290 CHD1O14646 1710 aa20.8■□□□□ 0.92
RPL3-213ENST00000471290 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
RPL3-213ENST00000471290 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.927e-12■■■■■ 79.4
RPL3-213ENST00000471290 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
RPL3-213ENST00000471290 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
RPL3-213ENST00000471290 FBLN2P98095 1184 aa20.7■□□□□ 0.9
RPL3-213ENST00000471290 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
RPL3-213ENST00000471290 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
RPL3-213ENST00000471290 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
RPL3-213ENST00000471290 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
RPL3-213ENST00000471290 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
RPL3-213ENST00000471290 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
RPL3-213ENST00000471290 SOGA1O94964 1423 aa20.54■□□□□ 0.88
RPL3-213ENST00000471290 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
RPL3-213ENST00000471290 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
RPL3-213ENST00000471290 CHMP7Q8WUX9 453 aaPredicted RBP20.49■□□□□ 0.87
RPL3-213ENST00000471290 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
RPL3-213ENST00000471290 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
RPL3-213ENST00000471290 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
RPL3-213ENST00000471290 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
RPL3-213ENST00000471290 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
RPL3-213ENST00000471290 CUX1P39880 1505 aa20.33■□□□□ 0.85
RPL3-213ENST00000471290 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
RPL3-213ENST00000471290 ERCC6L2Q5T890 1561 aa20.23■□□□□ 0.83
RPL3-213ENST00000471290 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
RPL3-213ENST00000471290 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
RPL3-213ENST00000471290 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
RPL3-213ENST00000471290 CEP170Q5SW79 1584 aa20.15■□□□□ 0.82
RPL3-213ENST00000471290 NUP160Q12769 1436 aa20.14■□□□□ 0.81
RPL3-213ENST00000471290 SHROOM2Q13796 1616 aa20.09■□□□□ 0.81
RPL3-213ENST00000471290 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
RPL3-213ENST00000471290 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
RPL3-213ENST00000471290 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.79
RPL3-213ENST00000471290 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
RPL3-213ENST00000471290 ABCC10Q5T3U5 1492 aa19.97■□□□□ 0.79
RPL3-213ENST00000471290 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
RPL3-213ENST00000471290 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
RPL3-213ENST00000471290 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
RPL3-213ENST00000471290 KDM4FA0A1W2PPD8 638 aa19.92■□□□□ 0.78
RPL3-213ENST00000471290 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms