RNA–Protein interactions for RNA: ENST00000435061.1

SREBF2-203, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 3

Gene SREBF2, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-203ENST00000435061 NISCHQ9Y2I1 1504 aa42.85■■■■■ 4.45
SREBF2-203ENST00000435061 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
SREBF2-203ENST00000435061 ABCC9O60706 1549 aa38.07■■■■□ 3.69
SREBF2-203ENST00000435061 RB1CC1Q8TDY2 1594 aa36.37■■■■□ 3.41
SREBF2-203ENST00000435061 NACADO15069 1562 aa36.21■■■■□ 3.39
SREBF2-203ENST00000435061 DCAF8L2P0C7V8 631 aa36.08■■■■□ 3.37
SREBF2-203ENST00000435061 MYO15BQ96JP2 1530 aa35.84■■■■□ 3.33
SREBF2-203ENST00000435061 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
SREBF2-203ENST00000435061 DNAJC5BQ9UF47 199 aa35.54■■■■□ 3.28
SREBF2-203ENST00000435061 PABPN1Q86U42 306 aaKnown RBP eCLIP35.53■■■■□ 3.28
SREBF2-203ENST00000435061 DCAF1Q9Y4B6 1507 aa35.44■■■■□ 3.26
SREBF2-203ENST00000435061 UNC13AQ9UPW8 1703 aa35.43■■■■□ 3.26
SREBF2-203ENST00000435061 BICRAQ9NZM4 1560 aa35.26■■■■□ 3.24
SREBF2-203ENST00000435061 SHROOM4Q9ULL8 1493 aa34.92■■■■□ 3.18
SREBF2-203ENST00000435061 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
SREBF2-203ENST00000435061 CC2D2AQ9P2K1 1620 aa34.4■■■■□ 3.1
SREBF2-203ENST00000435061 EIF4G1Q04637 1599 aaKnown RBP34.4■■■■□ 3.1
SREBF2-203ENST00000435061 CECR2Q9BXF3 1484 aa34.31■■■■□ 3.08
SREBF2-203ENST00000435061 NCAPD3P42695 1498 aa33.45■■■□□ 2.95
SREBF2-203ENST00000435061 ATAD2BQ9ULI0 1458 aa33.35■■■□□ 2.93
SREBF2-203ENST00000435061 SMARCA4P51532 1647 aa33.33■■■□□ 2.93
SREBF2-203ENST00000435061 SMARCA2P51531 1590 aa33.27■■■□□ 2.92
SREBF2-203ENST00000435061 BAZ1AQ9NRL2 1556 aaPredicted RBP33.24■■■□□ 2.91
SREBF2-203ENST00000435061 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
SREBF2-203ENST00000435061 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
SREBF2-203ENST00000435061 BAZ1BQ9UIG0 1483 aaKnown RBP33.03■■■□□ 2.88
SREBF2-203ENST00000435061 MROH2BQ7Z745 1585 aa32.98■■■□□ 2.87
SREBF2-203ENST00000435061 ERCC6Q03468 1493 aa32.89■■■□□ 2.86
SREBF2-203ENST00000435061 CUX2O14529 1486 aa32.78■■■□□ 2.84
SREBF2-203ENST00000435061 NESP48681 1621 aa32.76■■■□□ 2.83
SREBF2-203ENST00000435061 LAMC3Q9Y6N6 1575 aa32.62■■■□□ 2.81
SREBF2-203ENST00000435061 WIZO95785 1651 aa32.56■■■□□ 2.8
SREBF2-203ENST00000435061 DNAJC5Q9H3Z4 198 aa32.52■■■□□ 2.8
SREBF2-203ENST00000435061 PDS5BQ9NTI5 1447 aa32.48■■■□□ 2.79
SREBF2-203ENST00000435061 CADPSQ9ULU8 1353 aa32.45■■■□□ 2.79
SREBF2-203ENST00000435061 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
SREBF2-203ENST00000435061 THOC2Q8NI27 1593 aaKnown RBP32.36■■■□□ 2.77
SREBF2-203ENST00000435061 KIF21AQ7Z4S6 1674 aa32.28■■■□□ 2.76
SREBF2-203ENST00000435061 TOP2AP11388 1531 aaKnown RBP32.21■■■□□ 2.75
SREBF2-203ENST00000435061 MRC2Q9UBG0 1479 aa32.13■■■□□ 2.73
SREBF2-203ENST00000435061 CFTRP13569 1480 aa32.11■■■□□ 2.73
SREBF2-203ENST00000435061 FANCD2Q9BXW9 1451 aa32.04■■■□□ 2.72
SREBF2-203ENST00000435061 CEP164Q9UPV0 1460 aa32.04■■■□□ 2.72
SREBF2-203ENST00000435061 WDR62O43379 1518 aa32.03■■■□□ 2.72
SREBF2-203ENST00000435061 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
SREBF2-203ENST00000435061 URB2Q14146 1524 aaKnown RBP31.74■■■□□ 2.67
SREBF2-203ENST00000435061 PRDM2Q13029 1718 aa31.68■■■□□ 2.66
SREBF2-203ENST00000435061 ABCC8Q09428 1581 aa31.47■■■□□ 2.63
SREBF2-203ENST00000435061 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
SREBF2-203ENST00000435061 IFT140Q96RY7 1462 aa31.43■■■□□ 2.62
SREBF2-203ENST00000435061 OSCARQ8IYS5 282 aa31.37■■■□□ 2.61
SREBF2-203ENST00000435061 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
SREBF2-203ENST00000435061 ZNF608Q9ULD9 1512 aaPredicted RBP31.3■■■□□ 2.6
SREBF2-203ENST00000435061 SUPT5HO00267 1087 aaKnown RBP31.17■■■□□ 2.58
SREBF2-203ENST00000435061 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
SREBF2-203ENST00000435061 TRIM41Q8WV44 630 aa31.13■■■□□ 2.57
SREBF2-203ENST00000435061 TARBP1Q13395 1621 aaKnown RBP31.12■■■□□ 2.57
SREBF2-203ENST00000435061 EIF4G3O43432 1585 aaKnown RBP31.1■■■□□ 2.57
SREBF2-203ENST00000435061 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.577e-10■■■■■ 29.7
SREBF2-203ENST00000435061 SOGA1O94964 1423 aa31.05■■■□□ 2.56
SREBF2-203ENST00000435061 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
SREBF2-203ENST00000435061 CUX1P39880 1505 aa30.98■■■□□ 2.55
SREBF2-203ENST00000435061 FGD5Q6ZNL6 1462 aa30.97■■■□□ 2.55
SREBF2-203ENST00000435061 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
SREBF2-203ENST00000435061 WDR97A6NE52 1622 aa30.88■■■□□ 2.53
SREBF2-203ENST00000435061 FBLN2P98095 1184 aa30.85■■■□□ 2.53
SREBF2-203ENST00000435061 RIMBP3CA6NJZ7 1639 aa30.8■■■□□ 2.52
SREBF2-203ENST00000435061 RIMBP3BA6NNM3 1639 aa30.8■■■□□ 2.52
SREBF2-203ENST00000435061 RIMBP3Q9UFD9 1639 aa30.8■■■□□ 2.52
SREBF2-203ENST00000435061 CHD1O14646 1710 aa30.79■■■□□ 2.52
SREBF2-203ENST00000435061 ARHGEF11O15085 1522 aa30.77■■■□□ 2.52
SREBF2-203ENST00000435061 SNAPC4Q5SXM2 1469 aa30.75■■■□□ 2.51
SREBF2-203ENST00000435061 GRIN2BQ13224 1484 aa30.74■■■□□ 2.51
SREBF2-203ENST00000435061 MAGI1Q96QZ7 1491 aaPredicted RBP30.72■■■□□ 2.51
SREBF2-203ENST00000435061 CHMP7Q8WUX9 453 aaPredicted RBP30.7■■■□□ 2.51
SREBF2-203ENST00000435061 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
SREBF2-203ENST00000435061 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
SREBF2-203ENST00000435061 WRNQ14191 1432 aaPredicted RBP eCLIP30.63■■■□□ 2.49
SREBF2-203ENST00000435061 SYNJ2O15056 1496 aa30.61■■■□□ 2.49
SREBF2-203ENST00000435061 CYB5RLQ6IPT4 315 aa30.58■■■□□ 2.49
SREBF2-203ENST00000435061 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
SREBF2-203ENST00000435061 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
SREBF2-203ENST00000435061 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
SREBF2-203ENST00000435061 BIVM-ERCC5R4GMW8 1640 aa30.52■■■□□ 2.48
SREBF2-203ENST00000435061 CLASP1Q7Z460 1538 aa30.52■■■□□ 2.48
SREBF2-203ENST00000435061 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
SREBF2-203ENST00000435061 ARAP1Q96P48 1450 aa30.48■■■□□ 2.47
SREBF2-203ENST00000435061 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
SREBF2-203ENST00000435061 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
SREBF2-203ENST00000435061 ADAMTS12P58397 1594 aa30.3■■■□□ 2.44
SREBF2-203ENST00000435061 ERICH3Q5RHP9 1530 aa30.28■■■□□ 2.44
SREBF2-203ENST00000435061 NUP160Q12769 1436 aa30.23■■■□□ 2.43
SREBF2-203ENST00000435061 CEP170Q5SW79 1584 aa30.16■■■□□ 2.42
SREBF2-203ENST00000435061 TRHP20396 242 aaPredicted RBP30.16■■■□□ 2.42
SREBF2-203ENST00000435061 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
SREBF2-203ENST00000435061 SHROOM2Q13796 1616 aa30.02■■■□□ 2.4
SREBF2-203ENST00000435061 ERCC6L2Q5T890 1561 aa30.02■■■□□ 2.4
SREBF2-203ENST00000435061 IGF1RP08069 1367 aa30■■■□□ 2.39
SREBF2-203ENST00000435061 JPH4Q96JJ6 628 aa29.97■■■□□ 2.39
SREBF2-203ENST00000435061 PRG4Q92954 1404 aaPredicted RBP29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms