RNA–Protein interactions for RNA: ENST00000454845.1

FLOT1-207, Transcript of flotillin 1, humanhuman

TSL 3

Gene FLOT1, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-207ENST00000454845 NISCHQ9Y2I1 1504 aa37.43■■■■□ 3.58
FLOT1-207ENST00000454845 ABCC9O60706 1549 aa33.96■■■■□ 3.03
FLOT1-207ENST00000454845 CCDC180Q9P1Z9 1646 aa33.75■■■□□ 2.99
FLOT1-207ENST00000454845 RB1CC1Q8TDY2 1594 aa32.24■■■□□ 2.75
FLOT1-207ENST00000454845 DNAJC5BQ9UF47 199 aa32.02■■■□□ 2.72
FLOT1-207ENST00000454845 NACADO15069 1562 aa31.95■■■□□ 2.71
FLOT1-207ENST00000454845 DCAF8L2P0C7V8 631 aa31.66■■■□□ 2.66
FLOT1-207ENST00000454845 PABPN1Q86U42 306 aaKnown RBP eCLIP31.53■■■□□ 2.64
FLOT1-207ENST00000454845 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
FLOT1-207ENST00000454845 MYO15BQ96JP2 1530 aa31.43■■■□□ 2.62
FLOT1-207ENST00000454845 BICRAQ9NZM4 1560 aa31.27■■■□□ 2.6
FLOT1-207ENST00000454845 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
FLOT1-207ENST00000454845 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
FLOT1-207ENST00000454845 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
FLOT1-207ENST00000454845 SCRIBQ14160 1630 aa30.7■■■□□ 2.51
FLOT1-207ENST00000454845 CC2D2AQ9P2K1 1620 aa30.67■■■□□ 2.5
FLOT1-207ENST00000454845 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
FLOT1-207ENST00000454845 EIF4G1Q04637 1599 aaKnown RBP30.55■■■□□ 2.48
FLOT1-207ENST00000454845 DNAJC5Q9H3Z4 198 aa29.64■■■□□ 2.34
FLOT1-207ENST00000454845 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
FLOT1-207ENST00000454845 CUX2O14529 1486 aa29.42■■■□□ 2.3
FLOT1-207ENST00000454845 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
FLOT1-207ENST00000454845 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
FLOT1-207ENST00000454845 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
FLOT1-207ENST00000454845 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
FLOT1-207ENST00000454845 SMARCA4P51532 1647 aa29.27■■■□□ 2.28
FLOT1-207ENST00000454845 BAZ1AQ9NRL2 1556 aaPredicted RBP29.1■■■□□ 2.25
FLOT1-207ENST00000454845 NESP48681 1621 aa29.08■■■□□ 2.25
FLOT1-207ENST00000454845 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
FLOT1-207ENST00000454845 PEG3Q9GZU2 1588 aa29■■■□□ 2.23
FLOT1-207ENST00000454845 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
FLOT1-207ENST00000454845 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
FLOT1-207ENST00000454845 MROH2BQ7Z745 1585 aa28.82■■■□□ 2.2
FLOT1-207ENST00000454845 PDS5BQ9NTI5 1447 aa28.72■■■□□ 2.19
FLOT1-207ENST00000454845 KIF21AQ7Z4S6 1674 aa28.72■■■□□ 2.19
FLOT1-207ENST00000454845 CADPSQ9ULU8 1353 aa28.57■■■□□ 2.16
FLOT1-207ENST00000454845 MRC2Q9UBG0 1479 aa28.49■■■□□ 2.15
FLOT1-207ENST00000454845 WIZO95785 1651 aa28.46■■■□□ 2.15
FLOT1-207ENST00000454845 WDR62O43379 1518 aa28.43■■■□□ 2.14
FLOT1-207ENST00000454845 CEP164Q9UPV0 1460 aa28.33■■■□□ 2.13
FLOT1-207ENST00000454845 FANCD2Q9BXW9 1451 aa28.26■■■□□ 2.11
FLOT1-207ENST00000454845 TRIM41Q8WV44 630 aa28.24■■■□□ 2.11
FLOT1-207ENST00000454845 CFTRP13569 1480 aa28.2■■■□□ 2.1
FLOT1-207ENST00000454845 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
FLOT1-207ENST00000454845 TOP2AP11388 1531 aaKnown RBP28.12■■■□□ 2.09
FLOT1-207ENST00000454845 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
FLOT1-207ENST00000454845 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
FLOT1-207ENST00000454845 PRDM2Q13029 1718 aa27.92■■■□□ 2.06
FLOT1-207ENST00000454845 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.04
FLOT1-207ENST00000454845 IFT140Q96RY7 1462 aa27.76■■■□□ 2.04
FLOT1-207ENST00000454845 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
FLOT1-207ENST00000454845 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
FLOT1-207ENST00000454845 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
FLOT1-207ENST00000454845 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
FLOT1-207ENST00000454845 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
FLOT1-207ENST00000454845 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
FLOT1-207ENST00000454845 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
FLOT1-207ENST00000454845 DNMBPQ6XZF7 1577 aa27.58■■■□□ 2.01
FLOT1-207ENST00000454845 ARHGEF11O15085 1522 aa27.57■■■□□ 2
FLOT1-207ENST00000454845 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
FLOT1-207ENST00000454845 AQRO60306 1485 aaKnown RBP eCLIP27.43■■□□□ 1.983e-8■■■■■ 33
FLOT1-207ENST00000454845 CHD1O14646 1710 aa27.41■■□□□ 1.98
FLOT1-207ENST00000454845 POLA1P09884 1462 aaPredicted RBP27.39■■□□□ 1.98
FLOT1-207ENST00000454845 CYB5RLQ6IPT4 315 aa27.33■■□□□ 1.97
FLOT1-207ENST00000454845 FBLN2P98095 1184 aa27.3■■□□□ 1.96
FLOT1-207ENST00000454845 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
FLOT1-207ENST00000454845 RAD54L2Q9Y4B4 1467 aa27.27■■□□□ 1.96
FLOT1-207ENST00000454845 SOGA1O94964 1423 aa27.24■■□□□ 1.95
FLOT1-207ENST00000454845 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
FLOT1-207ENST00000454845 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
FLOT1-207ENST00000454845 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
FLOT1-207ENST00000454845 SNAPC4Q5SXM2 1469 aa27.17■■□□□ 1.94
FLOT1-207ENST00000454845 TRHP20396 242 aaPredicted RBP27.14■■□□□ 1.94
FLOT1-207ENST00000454845 MAGI1Q96QZ7 1491 aaPredicted RBP27.11■■□□□ 1.93
FLOT1-207ENST00000454845 CUX1P39880 1505 aa27.11■■□□□ 1.93
FLOT1-207ENST00000454845 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
FLOT1-207ENST00000454845 SYNJ1O43426 1573 aa27.08■■□□□ 1.93
FLOT1-207ENST00000454845 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
FLOT1-207ENST00000454845 CHMP7Q8WUX9 453 aaPredicted RBP27.06■■□□□ 1.92
FLOT1-207ENST00000454845 SYNJ2O15056 1496 aa27.01■■□□□ 1.91
FLOT1-207ENST00000454845 PBRM1Q86U86 1689 aa26.95■■□□□ 1.9
FLOT1-207ENST00000454845 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
FLOT1-207ENST00000454845 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
FLOT1-207ENST00000454845 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
FLOT1-207ENST00000454845 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
FLOT1-207ENST00000454845 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
FLOT1-207ENST00000454845 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
FLOT1-207ENST00000454845 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
FLOT1-207ENST00000454845 NUP160Q12769 1436 aa26.64■■□□□ 1.85
FLOT1-207ENST00000454845 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
FLOT1-207ENST00000454845 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
FLOT1-207ENST00000454845 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
FLOT1-207ENST00000454845 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
FLOT1-207ENST00000454845 FHAD1B1AJZ9 1412 aa26.57■■□□□ 1.84
FLOT1-207ENST00000454845 AEBP2Q6ZN18 517 aaPredicted RBP26.56■■□□□ 1.84
FLOT1-207ENST00000454845 SHROOM2Q13796 1616 aa26.55■■□□□ 1.84
FLOT1-207ENST00000454845 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
FLOT1-207ENST00000454845 PRG4Q92954 1404 aaPredicted RBP26.39■■□□□ 1.81
FLOT1-207ENST00000454845 KIF13AQ9H1H9 1805 aa26.32■■□□□ 1.8
FLOT1-207ENST00000454845 JPH4Q96JJ6 628 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms