Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ZNF692-205ENST00000462037 827 ntTSL 210.88□□□□□ -0.673e-11■■□□□ 11.6
LSM11P83369 ZNF692-209ENST00000474351 867 ntTSL 29.86□□□□□ -0.833e-11■■□□□ 11.6
LSM11P83369 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.797e-8■■□□□ 11.6
LSM11P83369 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.763e-7■■□□□ 11.6
LSM11P83369 FKBP2-204ENST00000535135 639 ntTSL 321.58■■□□□ 1.052e-6■■□□□ 11.6
LSM11P83369 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.857e-8■■□□□ 11.6
LSM11P83369 MVD-208ENST00000563785 888 ntTSL 217.21■□□□□ 0.352e-6■■□□□ 11.6
LSM11P83369 MVD-213ENST00000566636 863 ntTSL 317.04■□□□□ 0.322e-6■■□□□ 11.6
LSM11P83369 FKBP2-205ENST00000536642 637 ntTSL 216.8■□□□□ 0.282e-6■■□□□ 11.6
LSM11P83369 MICALL2-211ENST00000487156 874 ntTSL 516.67■□□□□ 0.262e-6■■□□□ 11.6
LSM11P83369 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.254e-10■■□□□ 11.6
LSM11P83369 MVD-214ENST00000567064 758 ntTSL 316.47■□□□□ 0.232e-6■■□□□ 11.6
LSM11P83369 MVD-216ENST00000568709 809 ntTSL 516.35■□□□□ 0.212e-6■■□□□ 11.6
LSM11P83369 MVD-211ENST00000565720 436 ntTSL 315.69■□□□□ 0.12e-6■■□□□ 11.6
LSM11P83369 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.32■□□□□ 0.047e-8■■□□□ 11.6
LSM11P83369 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.032e-10■■□□□ 11.6
LSM11P83369 MVD-217ENST00000569177 870 ntTSL 515.02■□□□□ -02e-6■■□□□ 11.6
LSM11P83369 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.014e-10■■□□□ 11.6
LSM11P83369 MVD-215ENST00000568133 853 ntTSL 314.41□□□□□ -0.12e-6■■□□□ 11.6
LSM11P83369 MVD-206ENST00000563170 904 ntTSL 314.37□□□□□ -0.112e-6■■□□□ 11.6
LSM11P83369 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)13.75□□□□□ -0.214e-10■■□□□ 11.6
LSM11P83369 ENO1-202ENST00000464920 2266 ntTSL 1 (best)12.17□□□□□ -0.464e-10■■□□□ 11.6
LSM11P83369 TCF25-210ENST00000563484 468 ntTSL 211.92□□□□□ -0.52e-6■■□□□ 11.6
LSM11P83369 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.524e-10■■□□□ 11.6
LSM11P83369 ENO1-206ENST00000497492 647 ntTSL 210.7□□□□□ -0.74e-10■■□□□ 11.6
LSM11P83369 NBAS-208ENST00000442506 4391 ntTSL 1 (best)10.09□□□□□ -0.792e-6■■□□□ 11.6
LSM11P83369 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.884e-10■■□□□ 11.6
LSM11P83369 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.092e-6■■□□□ 11.6
LSM11P83369 SSFA2-215ENST00000495248 219 ntTSL 57.74□□□□□ -1.173e-8■■□□□ 11.6
LSM11P83369 ARID1A-216ENST00000637465 699 ntTSL 55.12□□□□□ -1.594e-10■■□□□ 11.6
LSM11P83369 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.672e-6■■□□□ 11.6
LSM11P83369 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.86■□□□□ 0.611e-6■■□□□ 11.6
LSM11P83369 SYTL1-206ENST00000490170 2681 ntTSL 218.17■□□□□ 0.51e-6■■□□□ 11.6
LSM11P83369 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.461e-6■■□□□ 11.6
LSM11P83369 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.54■□□□□ 0.41e-6■■□□□ 11.6
LSM11P83369 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.391e-6■■□□□ 11.6
LSM11P83369 SYTL1-204ENST00000483926 2525 ntTSL 217.24■□□□□ 0.351e-6■■□□□ 11.6
LSM11P83369 SYTL1-209ENST00000615284 793 ntTSL 213.76□□□□□ -0.211e-6■■□□□ 11.6
LSM11P83369 SYTL1-203ENST00000475199 2235 ntTSL 212.1□□□□□ -0.471e-6■■□□□ 11.6
LSM11P83369 HSPA9-206ENST00000506477 664 ntTSL 214.79□□□□□ -0.046e-8■■□□□ 11.6
LSM11P83369 HSPA9-205ENST00000505110 518 ntTSL 413.76□□□□□ -0.216e-8■■□□□ 11.6
LSM11P83369 HSPA9-207ENST00000507097 1796 ntTSL 212.95□□□□□ -0.346e-8■■□□□ 11.6
LSM11P83369 HSPA9-204ENST00000504902 887 ntTSL 512.86□□□□□ -0.356e-8■■□□□ 11.6
LSM11P83369 HSPA9-208ENST00000507115 663 ntTSL 311.43□□□□□ -0.586e-8■■□□□ 11.6
LSM11P83369 HSPA9-203ENST00000504810 584 ntTSL 311.4□□□□□ -0.586e-8■■□□□ 11.6
LSM11P83369 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.866e-8■■□□□ 11.6
LSM11P83369 HSPA9-209ENST00000507886 551 ntTSL 38.73□□□□□ -1.016e-8■■□□□ 11.6
LSM11P83369 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.11■□□□□ 0.172e-28■■□□□ 11.6
LSM11P83369 VEGFA-221ENST00000520265 336 ntTSL 512.34□□□□□ -0.432e-28■■□□□ 11.6
LSM11P83369 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.16□□□□□ -0.462e-28■■□□□ 11.6
LSM11P83369 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC11.69□□□□□ -0.542e-28■■□□□ 11.6
LSM11P83369 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC11.4□□□□□ -0.582e-28■■□□□ 11.6
LSM11P83369 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.652e-28■■□□□ 11.6
LSM11P83369 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC10.67□□□□□ -0.72e-28■■□□□ 11.6
LSM11P83369 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC10.67□□□□□ -0.72e-28■■□□□ 11.6
LSM11P83369 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.72e-28■■□□□ 11.6
LSM11P83369 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)8.53□□□□□ -1.048e-18■■□□□ 11.6
LSM11P83369 RHOT2-221ENST00000569358 1273 ntTSL 517.5■□□□□ 0.391e-6■■□□□ 11.6
LSM11P83369 RHOT2-213ENST00000565004 1014 ntTSL 513.81□□□□□ -0.21e-6■■□□□ 11.6
LSM11P83369 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.97■□□□□ 0.153e-9■■□□□ 11.5
LSM11P83369 EPB41-213ENST00000636666 3642 ntTSL 56.38□□□□□ -1.393e-9■■□□□ 11.5
LSM11P83369 MST1-220ENST00000497359 1917 ntTSL 521.06■□□□□ 0.962e-11■■□□□ 11.5
LSM11P83369 MST1-221ENST00000498021 854 ntTSL 213.14□□□□□ -0.312e-11■■□□□ 11.5
LSM11P83369 RBM39-235ENST00000490354 436 ntTSL 210.72□□□□□ -0.696e-15■■□□□ 11.5
LSM11P83369 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.14■□□□□ 0.174e-13■■□□□ 11.5
LSM11P83369 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.65□□□□□ -0.224e-13■■□□□ 11.5
LSM11P83369 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.654e-13■■□□□ 11.5
LSM11P83369 FARP1-221ENST00000597596 439 ntTSL 35.31□□□□□ -1.564e-13■■□□□ 11.5
LSM11P83369 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.132e-8■■□□□ 11.5
LSM11P83369 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.112e-8■■□□□ 11.5
LSM11P83369 COL18A1-201ENST00000342220 3386 ntTSL 212.16□□□□□ -0.462e-8■■□□□ 11.5
LSM11P83369 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.091e-11■■□□□ 11.5
LSM11P83369 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.55e-9■■□□□ 11.5
LSM11P83369 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.45■□□□□ 0.385e-9■■□□□ 11.5
LSM11P83369 JAK3-203ENST00000527031 2809 ntTSL 215.12■□□□□ 0.014e-6■■□□□ 11.5
LSM11P83369 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.8□□□□□ -0.045e-9■■□□□ 11.5
LSM11P83369 CACNA2D4-217ENST00000545595 1615 ntTSL 1 (best)14.52□□□□□ -0.094e-6■■□□□ 11.5
LSM11P83369 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.114e-6■■□□□ 11.5
LSM11P83369 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.314e-6■■□□□ 11.5
LSM11P83369 CLK1-209ENST00000472679 461 ntTSL 212.75□□□□□ -0.375e-9■■□□□ 11.5
LSM11P83369 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.454e-6■■□□□ 11.5
LSM11P83369 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC12.15□□□□□ -0.465e-9■■□□□ 11.5
LSM11P83369 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.494e-6■■□□□ 11.5
LSM11P83369 CACNA2D4-201ENST00000280663 5936 ntTSL 211.95□□□□□ -0.54e-6■■□□□ 11.5
LSM11P83369 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC11.49□□□□□ -0.574e-6■■□□□ 11.5
LSM11P83369 CACNA2D4-206ENST00000537784 2876 ntTSL 1 (best)11.31□□□□□ -0.64e-6■■□□□ 11.5
LSM11P83369 PAPOLA-220ENST00000556459 959 ntTSL 511.29□□□□□ -0.64e-6■■□□□ 11.5
LSM11P83369 NEK9-210ENST00000557026 5177 ntTSL 210.43□□□□□ -0.744e-6■■□□□ 11.5
LSM11P83369 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.834e-6■■□□□ 11.5
LSM11P83369 CLK1-208ENST00000464454 484 ntTSL 29.45□□□□□ -0.95e-9■■□□□ 11.5
LSM11P83369 DUSP6-201ENST00000279488 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.91e-11■■□□□ 11.5
LSM11P83369 NEK9-205ENST00000555405 3357 ntTSL 1 (best)9.39□□□□□ -0.914e-6■■□□□ 11.5
LSM11P83369 CLK1-204ENST00000432425 1682 ntTSL 1 (best)8.8□□□□□ -15e-9■■□□□ 11.5
LSM11P83369 CLK1-202ENST00000409403 1664 ntTSL 58.63□□□□□ -1.035e-9■■□□□ 11.5
LSM11P83369 CACNA2D4-203ENST00000444595 4450 ntTSL 1 (best)8.6□□□□□ -1.034e-6■■□□□ 11.5
LSM11P83369 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.095e-9■■□□□ 11.5
LSM11P83369 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.07□□□□□ -1.124e-6■■□□□ 11.5
LSM11P83369 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.124e-6■■□□□ 11.5
LSM11P83369 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.88□□□□□ -1.155e-9■■□□□ 11.5
LSM11P83369 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.184e-6■■□□□ 11.5
Retrieved 100 of 11,495 protein–RNA pairs in 55.7 ms