RNA–Protein interactions for RNA: ENST00000429990.1

NPIPB15-201, Transcript of nuclear pore complex interacting protein family member B15, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPB15, Length 1,428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB15-201ENST00000429990 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
NPIPB15-201ENST00000429990 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
NPIPB15-201ENST00000429990 NISCHQ9Y2I1 1504 aa17.3■□□□□ 0.36
NPIPB15-201ENST00000429990 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
NPIPB15-201ENST00000429990 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
NPIPB15-201ENST00000429990 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
NPIPB15-201ENST00000429990 ABCC9O60706 1549 aa15.02■□□□□ -0
NPIPB15-201ENST00000429990 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
NPIPB15-201ENST00000429990 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
NPIPB15-201ENST00000429990 NACADO15069 1562 aa14.53□□□□□ -0.08
NPIPB15-201ENST00000429990 FOXD1Q16676 465 aa14.49□□□□□ -0.09
NPIPB15-201ENST00000429990 MYO15BQ96JP2 1530 aa14.47□□□□□ -0.09
NPIPB15-201ENST00000429990 ZCCHC6Q5VYS8 1495 aaKnown RBP14.4□□□□□ -0.1
NPIPB15-201ENST00000429990 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
NPIPB15-201ENST00000429990 DCAF8L2P0C7V8 631 aa14.37□□□□□ -0.11
NPIPB15-201ENST00000429990 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
NPIPB15-201ENST00000429990 ADRA2BP18089 450 aa14.17□□□□□ -0.14
NPIPB15-201ENST00000429990 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
NPIPB15-201ENST00000429990 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
NPIPB15-201ENST00000429990 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
NPIPB15-201ENST00000429990 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
NPIPB15-201ENST00000429990 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
NPIPB15-201ENST00000429990 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
NPIPB15-201ENST00000429990 EIF4G1Q04637 1599 aaKnown RBP13.69□□□□□ -0.22
NPIPB15-201ENST00000429990 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
NPIPB15-201ENST00000429990 CC2D2AQ9P2K1 1620 aa13.63□□□□□ -0.23
NPIPB15-201ENST00000429990 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
NPIPB15-201ENST00000429990 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
NPIPB15-201ENST00000429990 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
NPIPB15-201ENST00000429990 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
NPIPB15-201ENST00000429990 NCAPD3P42695 1498 aa13.38□□□□□ -0.27
NPIPB15-201ENST00000429990 ATAD2BQ9ULI0 1458 aa13.35□□□□□ -0.27
NPIPB15-201ENST00000429990 PEG3Q9GZU2 1588 aa13.34□□□□□ -0.27
NPIPB15-201ENST00000429990 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
NPIPB15-201ENST00000429990 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
NPIPB15-201ENST00000429990 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
NPIPB15-201ENST00000429990 KCNA4P22459 653 aa13.21□□□□□ -0.3
NPIPB15-201ENST00000429990 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
NPIPB15-201ENST00000429990 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
NPIPB15-201ENST00000429990 WIZO95785 1651 aa13.13□□□□□ -0.31
NPIPB15-201ENST00000429990 MSH5O43196 834 aa13.12□□□□□ -0.31
NPIPB15-201ENST00000429990 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
NPIPB15-201ENST00000429990 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
NPIPB15-201ENST00000429990 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
NPIPB15-201ENST00000429990 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
NPIPB15-201ENST00000429990 NESP48681 1621 aa12.97□□□□□ -0.33
NPIPB15-201ENST00000429990 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.33
NPIPB15-201ENST00000429990 CUX2O14529 1486 aa12.92□□□□□ -0.34
NPIPB15-201ENST00000429990 CFTRP13569 1480 aa12.9□□□□□ -0.34
NPIPB15-201ENST00000429990 KIF21AQ7Z4S6 1674 aa12.87□□□□□ -0.35
NPIPB15-201ENST00000429990 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
NPIPB15-201ENST00000429990 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
NPIPB15-201ENST00000429990 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
NPIPB15-201ENST00000429990 PRDM2Q13029 1718 aa12.84□□□□□ -0.35
NPIPB15-201ENST00000429990 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
NPIPB15-201ENST00000429990 CEP164Q9UPV0 1460 aa12.82□□□□□ -0.36
NPIPB15-201ENST00000429990 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
NPIPB15-201ENST00000429990 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
NPIPB15-201ENST00000429990 WDR62O43379 1518 aa12.76□□□□□ -0.37
NPIPB15-201ENST00000429990 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
NPIPB15-201ENST00000429990 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
NPIPB15-201ENST00000429990 SUPT5HO00267 1087 aaKnown RBP12.72□□□□□ -0.37
NPIPB15-201ENST00000429990 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.38
NPIPB15-201ENST00000429990 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
NPIPB15-201ENST00000429990 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
NPIPB15-201ENST00000429990 DNMBPQ6XZF7 1577 aa12.61□□□□□ -0.39
NPIPB15-201ENST00000429990 TOPBP1Q92547 1522 aa12.6□□□□□ -0.39
NPIPB15-201ENST00000429990 IFT140Q96RY7 1462 aa12.56□□□□□ -0.4
NPIPB15-201ENST00000429990 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
NPIPB15-201ENST00000429990 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
NPIPB15-201ENST00000429990 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
NPIPB15-201ENST00000429990 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
NPIPB15-201ENST00000429990 CUX1P39880 1505 aa12.48□□□□□ -0.41
NPIPB15-201ENST00000429990 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
NPIPB15-201ENST00000429990 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
NPIPB15-201ENST00000429990 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
NPIPB15-201ENST00000429990 FGD5Q6ZNL6 1462 aa12.44□□□□□ -0.42
NPIPB15-201ENST00000429990 SOGA1O94964 1423 aa12.44□□□□□ -0.42
NPIPB15-201ENST00000429990 ZNF608Q9ULD9 1512 aaPredicted RBP12.43□□□□□ -0.42
NPIPB15-201ENST00000429990 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
NPIPB15-201ENST00000429990 WRNQ14191 1432 aaPredicted RBP eCLIP12.41□□□□□ -0.42
NPIPB15-201ENST00000429990 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
NPIPB15-201ENST00000429990 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
NPIPB15-201ENST00000429990 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
NPIPB15-201ENST00000429990 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
NPIPB15-201ENST00000429990 AQRO60306 1485 aaKnown RBP eCLIP12.36□□□□□ -0.43
NPIPB15-201ENST00000429990 ABCA10Q8WWZ4 1543 aa12.36□□□□□ -0.43
NPIPB15-201ENST00000429990 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
NPIPB15-201ENST00000429990 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
NPIPB15-201ENST00000429990 TDRD9Q8NDG6 1382 aaKnown RBP12.33□□□□□ -0.44
NPIPB15-201ENST00000429990 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
NPIPB15-201ENST00000429990 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
NPIPB15-201ENST00000429990 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
NPIPB15-201ENST00000429990 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
NPIPB15-201ENST00000429990 ABCA5Q8WWZ7 1642 aa12.31□□□□□ -0.44
NPIPB15-201ENST00000429990 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
NPIPB15-201ENST00000429990 PBRM1Q86U86 1689 aa12.28□□□□□ -0.44
NPIPB15-201ENST00000429990 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.45
NPIPB15-201ENST00000429990 CHD1O14646 1710 aa12.26□□□□□ -0.45
NPIPB15-201ENST00000429990 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms